Sample Preservation, DNA or RNA Extraction and Data Analysis for High-Throughput Phytoplankton Community Sequencing
出版年份 2017 全文链接
标题
Sample Preservation, DNA or RNA Extraction and Data Analysis for High-Throughput Phytoplankton Community Sequencing
作者
关键词
-
出版物
Frontiers in Microbiology
Volume 8, Issue -, Pages -
出版商
Frontiers Media SA
发表日期
2017-09-26
DOI
10.3389/fmicb.2017.01848
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- (2017) Rao Fu et al. JOURNAL OF EUKARYOTIC MICROBIOLOGY
- Reference standards for next-generation sequencing
- (2017) Simon A. Hardwick et al. NATURE REVIEWS GENETICS
- Design and Evaluation of Illumina MiSeq-Compatible, 18S rRNA Gene-Specific Primers for Improved Characterization of Mixed Phototrophic Communities
- (2016) Ian M. Bradley et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- A practical method for barcoding and size-trimming PCR templates for amplicon sequencing
- (2016) Anita Mäki et al. BIOTECHNIQUES
- Trimming of sequence reads alters RNA-Seq gene expression estimates
- (2016) Claire R. Williams et al. BMC BIOINFORMATICS
- Is metabarcoding suitable for estuarine plankton monitoring? A comparative study with microscopy
- (2016) David Abad et al. MARINE BIOLOGY
- Relic DNA is abundant in soil and obscures estimates of soil microbial diversity
- (2016) Paul Carini et al. Nature Microbiology
- Techniques for Quantifying Phytoplankton Biodiversity
- (2015) Zackary I. Johnson et al. Annual Review of Marine Science
- Regular build-up of the spring phytoplankton maximum before ice-break in a boreal lake
- (2015) Pauliina Salmi et al. LIMNOLOGY AND OCEANOGRAPHY
- PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy
- (2015) Johan Decelle et al. Molecular Ecology Resources
- An Improved DNA Extraction Method for Efficient and Quantitative Recovery of Phytoplankton Diversity in Natural Assemblages
- (2015) Jian Yuan et al. PLoS One
- Eukaryotic plankton diversity in the sunlit ocean
- (2015) C. de Vargas et al. SCIENCE
- Open science resources for the discovery and analysis of Tara Oceans data
- (2015) Stéphane Pesant et al. Scientific Data
- Determining Microeukaryotic Plankton Community around Xiamen Island, Southeast China, Using Illumina MiSeq and PCR-DGGE Techniques
- (2015) Lingyu Yu et al. PLoS One
- Investigating Microbial Eukaryotic Diversity from a Global Census: Insights from a Comparison of Pyrotag and Full-Length Sequences of 18S rRNA Genes
- (2014) Alle A. Y. Lie et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Library preparation methods for next-generation sequencing: Tone down the bias
- (2014) Erwin L. van Dijk et al. EXPERIMENTAL CELL RESEARCH
- Characterization of the 18S rRNA Gene for Designing Universal Eukaryote Specific Primers
- (2014) Kenan Hadziavdic et al. PLoS One
- Optimal Eukaryotic 18S and Universal 16S/18S Ribosomal RNA Primers and Their Application in a Study of Symbiosis
- (2014) Yong Wang et al. PLoS One
- Systematic Design of 18S rRNA Gene Primers for Determining Eukaryotic Diversity in Microbial Consortia
- (2014) Luisa W. Hugerth et al. PLoS One
- On the optimal trimming of high-throughput mRNA sequence data
- (2014) Matthew D. MacManes Frontiers in Genetics
- The role of replicates for error mitigation in next-generation sequencing
- (2013) Kimberly Robasky et al. NATURE REVIEWS GENETICS
- Unveiling Distribution Patterns of Freshwater Phytoplankton by a Next Generation Sequencing Based Approach
- (2013) Alexander Eiler et al. PLoS One
- Comparative Analysis of Eukaryotic Marine Microbial Assemblages from 18S rRNA Gene and Gene Transcript Clone Libraries by Using Different Methods of Extraction
- (2012) Amy Koid et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Evaluation of DNA extraction methods for freshwater eukaryotic microalgae
- (2012) Lucy E. Eland et al. WATER RESEARCH
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Polymerase chain reaction primers miss half of rRNA microbial diversity
- (2009) SunHee Hong et al. ISME Journal
- A method for extracting a high-quality RNA from Symbiodinium sp.
- (2009) Nedeljka N. Rosic et al. JOURNAL OF APPLIED PHYCOLOGY
- Evaluation of DNA extraction and handling procedures for PCR-based copepod feeding studies
- (2009) Paolo Simonelli et al. JOURNAL OF PLANKTON RESEARCH
- A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
- (2009) Linda A. Amaral-Zettler et al. PLoS One
- The Life History and Cell Cycle of Kryptoperidinium foliaceum, A Dinoflagellate with Two Eukaryotic Nuclei
- (2009) Rosa Isabel Figueroa et al. PROTIST
- Quantification of Diatom and Dinoflagellate Biomasses in Coastal Marine Seawater Samples by Real-Time PCR
- (2008) A. Godhe et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
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