Modeling of protein complexes in CAPRI Round 37 using template-based approach combined with model selection
出版年份 2017 全文链接
标题
Modeling of protein complexes in CAPRI Round 37 using template-based approach combined with model selection
作者
关键词
-
出版物
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
Volume 86, Issue -, Pages 292-301
出版商
Wiley
发表日期
2017-09-14
DOI
10.1002/prot.25378
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- VoroMQA: Assessment of protein structure quality using interatomic contact areas
- (2017) Kliment Olechnovič et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Protein structure determination using metagenome sequence data
- (2017) Sergey Ovchinnikov et al. SCIENCE
- Assembly of Ruminococcus flavefaciens cellulosome revealed by structures of two cohesin-dockerin complexes
- (2017) Pedro Bule et al. Scientific Reports
- Single versus dual-binding conformations in cellulosomal cohesin–dockerin complexes
- (2016) Michael A Nash et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- The MPI bioinformatics Toolkit as an integrative platform for advanced protein sequence and structure analysis
- (2016) Vikram Alva et al. NUCLEIC ACIDS RESEARCH
- Lessons from (co-)evolution in the docking of proteins and peptides for CAPRI Rounds 28-35
- (2016) Jinchao Yu et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment
- (2016) Marc F. Lensink et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Modeling protein-protein and protein-peptide complexes: CAPRI 6th edition
- (2016) Marc F. Lensink et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Critical assessment of methods of protein structure prediction: Progress and new directions in round XI
- (2016) John Moult et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Cyclic di-GMP mediates a histidine kinase/phosphatase switch by noncovalent domain cross-linking
- (2016) B. N. Dubey et al. Science Advances
- Progress and challenges in predicting protein interfaces
- (2015) Reyhaneh Esmaielbeiki et al. BRIEFINGS IN BIOINFORMATICS
- Cell-surface Attachment of Bacterial Multienzyme Complexes Involves Highly Dynamic Protein-Protein Anchors
- (2015) Kate Cameron et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Signal Transduction in Histidine Kinases: Insights from New Structures
- (2015) Manasi P. Bhate et al. STRUCTURE
- Voronota: A fast and reliable tool for computing the vertices of the Voronoi diagram of atomic balls
- (2014) Kliment Olechnovič et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
- LRAT-specific domain facilitates vitamin A metabolism by domain swapping in HRASLS3
- (2014) Marcin Golczak et al. Nature Chemical Biology
- The CAD-score web server: contact area-based comparison of structures and interfaces of proteins, nucleic acids and their complexes
- (2014) Kliment Olechnovič et al. NUCLEIC ACIDS RESEARCH
- Assessing the Applicability of Template-Based Protein Docking in the Twilight Zone
- (2014) Jacopo Negroni et al. STRUCTURE
- Segmental Helical Motions and Dynamical Asymmetry Modulate Histidine Kinase Autophosphorylation
- (2014) Ariel E. Mechaly et al. PLOS BIOLOGY
- The scoring of poses in protein-protein docking: current capabilities and future directions
- (2013) Iain H Moal et al. BMC BIOINFORMATICS
- Template-based structure modeling of protein–protein interactions
- (2013) Andras Szilagyi et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Helix Bundle Loops Determine Whether Histidine Kinases Autophosphorylate in cis or in trans
- (2013) Orr Ashenberg et al. JOURNAL OF MOLECULAR BIOLOGY
- CAD-score: A new contact area difference-based function for evaluation of protein structural models
- (2013) Kliment Olechnovič et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Docking, scoring, and affinity prediction in CAPRI
- (2013) Marc F. Lensink et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Critical assessment of methods of protein structure prediction (CASP) - round x
- (2013) John Moult et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Protein Modeling: What Happened to the “Protein Structure Gap”?
- (2013) Torsten Schwede STRUCTURE
- A comparative assessment and analysis of 20 representative sequence alignment methods for protein structure prediction
- (2013) Renxiang Yan et al. Scientific Reports
- NovelClostridium thermocellumType I Cohesin-Dockerin Complexes Reveal a Single Binding Mode
- (2012) Joana L. A. Brás et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Templates are available to model nearly all complexes of structurally characterized proteins
- (2012) P. J. Kundrotas et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Alternative Protein-Protein Interfaces Are Frequent Exceptions
- (2012) Tobias Hamp et al. PLoS Computational Biology
- Atomic-Level Protein Structure Refinement Using Fragment-Guided Molecular Dynamics Conformation Sampling
- (2011) Jian Zhang et al. STRUCTURE
- Activated RhoA Binds to the Pleckstrin Homology (PH) Domain of PDZ-RhoGEF, a Potential Site for Autoregulation
- (2010) Zhe Chen et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Structural plasticity and catalysis regulation of a thermosensor histidine kinase
- (2009) D. Albanesi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- 1,3-Propanediol Dehydrogenase from Klebsiella pneumoniae: Decameric Quaternary Structure and Possible Subunit Cooperativity
- (2008) D. Marcal et al. JOURNAL OF BACTERIOLOGY
- TheClostridium cellulolyticumDockerin Displays a Dual Binding Mode for Its Cohesin Partner
- (2008) Benedita A. Pinheiro et al. JOURNAL OF BIOLOGICAL CHEMISTRY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started