Identification of salt-stress responsive microRNAs from Solanum lycopersicum and Solanum pimpinellifolium

Industrial processing versus home processing of tomato sauce: Effects on phenolics, flavonoids and in vitro bioaccessibility of antioxidants

(2017) Merve Tomas et al.   FOOD CHEMISTRY

Integration of auxin/indole-3-acetic acid 17 and RGA-LIKE3 confers salt stress resistance through stabilization by nitric oxide in Arabidopsis

(2017) Haitao Shi et al.   JOURNAL OF EXPERIMENTAL BOTANY

Combined analysis of mRNA and miRNA identifies dehydration and salinity responsive key molecular players in citrus roots

(2017) Rangjin Xie et al.   Scientific Reports

Transcriptome profiling of drought responsive noncoding RNAs and their target genes in rice

(2016) Pil Joong Chung et al.   BMC GENOMICS

MicroRNA-17 Suppresses TNF-α Signaling by Interfering with TRAF2 and cIAP2 Association in Rheumatoid Arthritis Synovial Fibroblasts

(2016) Nahid Akhtar et al.   JOURNAL OF IMMUNOLOGY

PDH45 transgenic rice maintain cell viability through lower accumulation of Na+, ROS and calcium homeostasis in roots under salinity stress

(2016) Manoj Nath et al.   JOURNAL OF PLANT PHYSIOLOGY

A New Insight of Salt Stress Signaling in Plant

(2016) Hee Jin Park et al.   MOLECULES AND CELLS

PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants

(2016) Jinpu Jin et al.   NUCLEIC ACIDS RESEARCH

A comparative in vitro study of salt tolerance in cultivated tomato and related wild species

(2016) Haitham E. M. Zaki et al.   Plant Biotechnology

Small RNA and degradome deep sequencing reveals drought-and tissue-specific micrornas and their important roles in drought-sensitive and drought-tolerant tomato genotypes

(2016) Bilgin Candar-Cakir et al.   PLANT BIOTECHNOLOGY JOURNAL

The miR393a/target module regulates seed germination and seedling establishment under submergence in rice (Oryza sativaL.)

(2016) Fu Guo et al.   PLANT CELL AND ENVIRONMENT

Reactive oxygen species, abiotic stress and stress combination

(2016) Feroza K. Choudhury et al.   PLANT JOURNAL

New Insights on Plant Salt Tolerance Mechanisms and Their Potential Use for Breeding

(2016) Moez Hanin et al.   Frontiers in Plant Science

MicroRNAs As Potential Targets for Abiotic Stress Tolerance in Plants

(2016) Varsha Shriram et al.   Frontiers in Plant Science

Identification of novel and salt-responsive miRNAs to explore miRNA-mediated regulatory network of salt stress response in radish (Raphanus sativus L.)

(2015) Xiaochuan Sun et al.   BMC GENOMICS

An integrative approach to identify hexaploid wheat miRNAome associated with development and tolerance to abiotic stress

(2015) Zahra Agharbaoui et al.   BMC GENOMICS

High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea

(2015) Juanjuan Feng et al.   BMC PLANT BIOLOGY

MicroRNA: a new target for improving plant tolerance to abiotic stress

(2015) Baohong Zhang   JOURNAL OF EXPERIMENTAL BOTANY

Modulation of the Phosphate-Deficient Responses by MicroRNA156 and its Targeted SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3 in Arabidopsis

(2015) Kai-Jian Lei et al.   PLANT AND CELL PHYSIOLOGY

Small RNA deep sequencing reveals the important role of microRNAs in the halophyteHalostachys caspica

(2015) Ruirui Yang et al.   PLANT BIOTECHNOLOGY JOURNAL

The tomato HD-Zip I transcription factor SlHZ24 modulates ascorbate accumulation through positive regulation of thed-mannose/l-galactose pathway

(2015) Tixu Hu et al.   PLANT JOURNAL

Identification of nitrogen starvation-responsive microRNAs in Chrysanthemum nankingense

(2015) Aiping Song et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Small RNA and degradome sequencing reveals microRNAs and their targets involved in tomato pedicel abscission

(2015) Tao Xu et al.   PLANTA

Processing, Packaging, and Storage of Tomato Products: Influence on the Lycopene Content

(2015) Ginés Benito Martínez-Hernández et al.   Food Engineering Reviews

Arabidopsis microRNA expression regulation in a wide range of abiotic stress responses

(2015) Maria Barciszewska-Pacak et al.   Frontiers in Plant Science

Global Identification of MicroRNAs and Their Targets in Barley under Salinity Stress

(2015) Pingchuan Deng et al.   PLoS One

The genome of the stress-tolerant wild tomato species Solanum pennellii

(2014) Anthony Bolger et al.   NATURE GENETICS

Arabidopsis miR156 Regulates Tolerance to Recurring Environmental Stress through SPL Transcription Factors

(2014) A. Stief et al.   PLANT CELL

ThemiR156-SPL9-DFRpathway coordinates the relationship between development and abiotic stress tolerance in plants

(2014) Long-Gang Cui et al.   PLANT JOURNAL

A Genome-Wide Perspective of miRNAome in Response to High Temperature, Salinity and Drought Stresses in Brassica juncea (Czern) L

(2014) Ankur R. Bhardwaj et al.   PLoS One

MiR393 Regulation of Auxin Signaling and Redox-Related Components during Acclimation to Salinity in Arabidopsis

(2014) María José Iglesias et al.   PLoS One

Identification and Characterization of Wilt and Salt Stress-Responsive MicroRNAs in Chickpea through High-Throughput Sequencing

(2014) Deshika Kohli et al.   PLoS One

The functional scope of plant microRNA-mediated silencing

(2014) Junyan Li et al.   TRENDS IN PLANT SCIENCE

A tidal wave of signals: calcium and ROS at the forefront of rapid systemic signaling

(2014) Simon Gilroy et al.   TRENDS IN PLANT SCIENCE

Plant salt-tolerance mechanisms

(2014) Ulrich Deinlein et al.   TRENDS IN PLANT SCIENCE

Tolerance to drought and salt stress in plants: Unraveling the signaling networks

(2014) Dortje Golldack et al.   Frontiers in Plant Science

The history of tomato: From domestication to biopharming

(2013) Véronique Bergougnoux   BIOTECHNOLOGY ADVANCES

Stress-induced early flowering is mediated by miR169 in Arabidopsis thaliana

(2013) Miao Yun Xu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Identification of microRNA targets in tomato fruit development using high-throughput sequencing and degradome analysis

(2013) Rumyana Karlova et al.   JOURNAL OF EXPERIMENTAL BOTANY

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

Data, information, knowledge and principle: back to metabolism in KEGG

(2013) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Putative megaenzyme DWA1 plays essential roles in drought resistance by regulating stress-induced wax deposition in rice

(2013) X. Zhu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide identification and expression analysis of heat-responsive and novel microRNAs in Populus tomentosa

(2012) Lei Chen et al.   GENE

Drought, salt, and temperature stress-induced metabolic rearrangements and regulatory networks

(2012) J. Krasensky et al.   JOURNAL OF EXPERIMENTAL BOTANY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Rfam 11.0: 10 years of RNA families

(2012) Sarah W. Burge et al.   NUCLEIC ACIDS RESEARCH

BrRZFP1aBrassica rapaC3HC4-type RING zinc finger protein involved in cold, salt and dehydration stress

(2012) Y. J. Jung et al.   PLANT BIOLOGY

IAA-Ala Resistant3, an Evolutionarily Conserved Target of miR167, Mediates Arabidopsis Root Architecture Changes during High Osmotic Stress

(2012) N. Kinoshita et al.   PLANT CELL

Insights into salt tolerance from the genome ofThellungiella salsuginea

(2012) Hua-Jun Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functions of microRNAs in plant stress responses

(2012) Ramanjulu Sunkar et al.   TRENDS IN PLANT SCIENCE

Genetics and Control of Tomato Fruit Ripening and Quality Attributes

(2011) Harry J. Klee et al.   Annual Review of Genetics

psRNATarget: a plant small RNA target analysis server

(2011) Xinbin Dai et al.   NUCLEIC ACIDS RESEARCH

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

Profiling of cold-stress-responsive miRNAs in rice by microarrays

(2010) De-Kang Lv et al.   GENE

Comparative Transcriptomic Profiling of a Salt-Tolerant Wild Tomato Species and a Salt-Sensitive Tomato Cultivar

(2010) Wei Sun et al.   PLANT AND CELL PHYSIOLOGY

miR390,Arabidopsis TAS3tasiRNAs, and TheirAUXIN RESPONSE FACTORTargets Define an Autoregulatory Network Quantitatively Regulating Lateral Root Growth

(2010) Elena Marin et al.   PLANT CELL

Research on plant abiotic stress responses in the post-genome era: past, present and future

(2010) Takashi Hirayama et al.   PLANT JOURNAL

Misexpression of miR482, miR1512, and miR1515 Increases Soybean Nodulation

(2010) H. Li et al.   PLANT PHYSIOLOGY

Origin, Biogenesis, and Activity of Plant MicroRNAs

(2009) Olivier Voinnet   CELL

Protein Phosphatases 2C Regulate the Activation of the Snf1-Related Kinase OST1 by Abscisic Acid in Arabidopsis

(2009) F. Vlad et al.   PLANT CELL

Mechanisms of Salinity Tolerance

(2008) Rana Munns et al.   Annual Review of Plant Biology

Analyzing real-time PCR data by the comparative CT method

(2008) Thomas D Schmittgen et al.   Nature Protocols