Genome-wide identification of physically clustered genes suggests chromatin-level co-regulation in male reproductive development in Arabidopsis thaliana

Delineation of metabolic gene clusters in plant genomes by chromatin signatures

(2016) Nan Yu et al.   NUCLEIC ACIDS RESEARCH

Regulation of metabolic gene clusters inArabidopsis thaliana

(2014) Hans-Wilhelm Nützmann et al.   NEW PHYTOLOGIST

Dynamics of chromatin accessibility and gene regulation by MADS-domain transcription factors in flower development

(2014) Alice Pajoro et al.   GENOME BIOLOGY

Tight Genetic Linkage of Prezygotic Barrier Loci Creates a Multifunctional Speciation Island in Petunia

(2013) Katrin Hermann et al.   CURRENT BIOLOGY

The C-Terminal Region of Cytoplasmic Polyadenylation Element Binding Protein Is a ZZ Domain with Potential for Protein–Protein Interactions

(2013) Daniel J. Merkel et al.   JOURNAL OF MOLECULAR BIOLOGY

The Capsella rubella genome and the genomic consequences of rapid mating system evolution

(2013) Tanja Slotte et al.   NATURE GENETICS

Gene networks controllingArabidopsis thalianaflower development

(2013) Diarmuid Seosamh Ó'Maoiléidigh et al.   NEW PHYTOLOGIST

CluGene: A Bioinformatics Framework for the Identification of Co-Localized, Co-Expressed and Co-Regulated Genes Aimed at the Investigation of Transcriptional Regulatory Networks from High-Throughput Expression Data

(2013) Tania Dottorini et al.   PLoS One

G-NEST: a gene neighborhood scoring tool to identify co-conserved, co-expressed genes

(2012) Danielle G Lemay et al.   BMC BIOINFORMATICS

Prediction of operon-like gene clusters in the Arabidopsis thaliana genome based on co-expression analysis of neighboring genes

(2012) Masayoshi Wada et al.   GENE

Molecular basis for the specification of floral organs by APETALA3 and PISTILLATA

(2012) S. E. Wuest et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Deposition of Histone Variant H2A.Z within Gene Bodies Regulates Responsive Genes

(2012) Devin Coleman-Derr et al.   PLoS Genetics

The Arabidopsis lyrata genome sequence and the basis of rapid genome size change

(2011) Tina T Hu et al.   NATURE GENETICS

The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

(2011) Philippe Lamesch et al.   NUCLEIC ACIDS RESEARCH

Formation of plant metabolic gene clusters within dynamic chromosomal regions

(2011) B. Field et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamic Regulation of H3K27 Trimethylation during Arabidopsis Differentiation

(2011) Marcel Lafos et al.   PLoS Genetics

Co-expression of neighbouring genes in Arabidopsis: separating chromatin effects from direct interactions

(2010) Wei-Hua Chen et al.   BMC GENOMICS

Selection upon Genome Architecture: Conservation of Functional Neighborhoods with Changing Genes

(2010) Fátima Al-Shahrour et al.   PLoS Computational Biology

CROC: finding chromosomal clusters in eukaryotic genomes

(2009) M. Pignatelli et al.   BIOINFORMATICS

Operons

(2009) Anne E. Osbourn et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Cell Type-Specific Chromatin Decondensation of a Metabolic Gene Cluster in Oats

(2009) E. Wegel et al.   PLANT CELL

The extracellular lipase EXL4 is required for efficient hydration of Arabidopsis pollen

(2009) Emily P. Updegraff et al.   SEXUAL PLANT REPRODUCTION

Using RSAT oligo-analysis and dyad-analysis tools to discover regulatory signals in nucleic sequences

(2008) Matthieu Defrance et al.   Nature Protocols

Metabolic Diversification--Independent Assembly of Operon-Like Gene Clusters in Different Plants

(2008) B. Field et al.   SCIENCE