标题
What shapes eukaryotic transcriptional bursting?
作者
关键词
-
出版物
Molecular BioSystems
Volume 13, Issue 7, Pages 1280-1290
出版商
Royal Society of Chemistry (RSC)
发表日期
2017-06-02
DOI
10.1039/c7mb00154a
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Transcription Dynamics in Living Cells
- (2016) Tineke L. Lenstra et al. Annual Review of Biophysics
- Enhancer Control of Transcriptional Bursting
- (2016) Takashi Fukaya et al. CELL
- Digital Quantification of Proteins and mRNA in Single Mammalian Cells
- (2016) Cem Albayrak et al. MOLECULAR CELL
- Enhancer Regulation of Transcriptional Bursting Parameters Revealed by Forced Chromatin Looping
- (2016) Caroline R. Bartman et al. MOLECULAR CELL
- What’s Luck Got to Do with It: Single Cells, Multiple Fates, and Biological Nondeterminism
- (2016) Orsolya Symmons et al. MOLECULAR CELL
- Mechanical bounds to transcriptional noise
- (2016) Stuart A. Sevier et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A single-molecule view of transcription reveals convoys of RNA polymerases and multi-scale bursting
- (2016) Katjana Tantale et al. Nature Communications
- Determining Physical Mechanisms of Gene Expression Regulation from Single Cell Gene Expression Data
- (2016) Daphne Ezer et al. PLoS Computational Biology
- Spatially coordinated dynamic gene transcription in living pituitary tissue
- (2016) Karen Featherstone et al. eLife
- Quantifying β-catenin subcellular dynamics and cyclin D1 mRNA transcription during Wnt signaling in single living cells
- (2016) Pinhas Kafri et al. eLife
- Single-cell analysis of transcription kinetics across the cell cycle
- (2016) Samuel O Skinner et al. eLife
- A continuum model of transcriptional bursting
- (2016) Adam M Corrigan et al. eLife
- Transcriptional Bursting Explains the Noise–Versus–Mean Relationship in mRNA and Protein Levels
- (2016) Roy D. Dar et al. PLoS One
- A stochastic transcriptional switch model for single cell imaging data
- (2015) Kirsty L. Hey et al. BIOSTATISTICS
- Control of Transcript Variability in Single Mammalian Cells
- (2015) Nico Battich et al. CELL
- Bayesian inference of reaction kinetics from single-cell recordings across a heterogeneous cell population
- (2015) L. Bronstein et al. METHODS
- CAST: An automated segmentation and tracking tool for the analysis of transcriptional kinetics from single-cell time-lapse recordings
- (2015) Simon Blanchoud et al. METHODS
- The volumes and transcript counts of single cells reveal concentration homeostasis and capture biological noise
- (2015) Hermannus Kempe et al. MOLECULAR BIOLOGY OF THE CELL
- Bursty Gene Expression in the Intact Mammalian Liver
- (2015) Keren Bahar Halpern et al. MOLECULAR CELL
- Single Mammalian Cells Compensate for Differences in Cellular Volume and DNA Copy Number through Independent Global Transcriptional Mechanisms
- (2015) Olivia Padovan-Merhar et al. MOLECULAR CELL
- Structure of silent transcription intervals and noise characteristics of mammalian genes
- (2015) B. Zoller et al. Molecular Systems Biology
- Orthogonal control of expression mean and variance by epigenetic features at different genomic loci
- (2015) S. S. Dey et al. Molecular Systems Biology
- Combining protein and mRNA quantification to decipher transcriptional regulation
- (2015) Heng Xu et al. NATURE METHODS
- Transcriptional refractoriness is dependent on core promoter architecture
- (2015) François Cesbron et al. Nature Communications
- Cellular Levels of Signaling Factors Are Sensed by β-actin Alleles to Modulate Transcriptional Pulse Intensity
- (2015) Alon Kalo et al. Cell Reports
- Nuclear Retention of mRNA in Mammalian Tissues
- (2015) Keren Bahar Halpern et al. Cell Reports
- Mechanism of Transcriptional Bursting in Bacteria
- (2014) Shasha Chong et al. CELL
- Dynamic Heterogeneity and DNA Methylation in Embryonic Stem Cells
- (2014) Zakary S. Singer et al. MOLECULAR CELL
- Facilitated diffusion buffers noise in gene expression
- (2014) Armin P. Schoech et al. PHYSICAL REVIEW E
- Nucleosomal promoter variation generates gene expression noise
- (2014) Christopher R. Brown et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Single-cell nucleosome mapping reveals the molecular basis of gene expression heterogeneity
- (2014) E. C. Small et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Dynamic regulation of eve stripe 2 expression reveals transcriptional bursts in living Drosophila embryos
- (2014) J. P. Bothma et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Stochastic promoter activation affects Nanog expression variability in mouse embryonic stem cells
- (2014) Hiroshi Ochiai et al. Scientific Reports
- Transcription Factors Modulate c-Fos Transcriptional Bursts
- (2014) Adrien Senecal et al. Cell Reports
- Quantifying the contribution of chromatin dynamics to stochastic gene expression reveals long, locus-dependent periods between transcriptional bursts
- (2013) José Viñuelas et al. BMC BIOLOGY
- Multimodality and Flexibility of Stochastic Gene Expression
- (2013) Guilherme da Costa Pereira Innocentini et al. BULLETIN OF MATHEMATICAL BIOLOGY
- Chromatin Position Effects Assayed by Thousands of Reporters Integrated in Parallel
- (2013) Waseem Akhtar et al. CELL
- Feedback Control of Gene Expression Variability in the Caenorhabditis elegans Wnt Pathway
- (2013) Ni Ji et al. CELL
- Precise Developmental Gene Expression Arises from Globally Stochastic Transcriptional Activity
- (2013) Shawn C. Little et al. CELL
- Eukaryotic transcriptional dynamics: from single molecules to cell populations
- (2013) Antoine Coulon et al. NATURE REVIEWS GENETICS
- Dynamic regulation of transcriptional states by chromatin and transcription factors
- (2013) Ty C. Voss et al. NATURE REVIEWS GENETICS
- Stimulus-induced modulation of transcriptional bursting in a single mammalian gene
- (2013) N. Molina et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genetic Determinants and Cellular Constraints in Noisy Gene Expression
- (2013) A. Sanchez et al. SCIENCE
- Systematic Identification of Signal-Activated Stochastic Gene Regulation
- (2013) G. Neuert et al. SCIENCE
- Linking Stochastic Fluctuations in Chromatin Structure and Gene Expression
- (2013) Christopher R. Brown et al. PLOS BIOLOGY
- Cell-Cycle Dependence of Transcription Dominates Noise in Gene Expression
- (2013) C. J. Zopf et al. PLoS Computational Biology
- Direct observation of frequency modulated transcription in single cells using light activation
- (2013) Daniel R Larson et al. eLife
- Inferring the kinetics of stochastic gene expression from single-cell RNA-sequencing data
- (2013) Jong Kim et al. GENOME BIOLOGY
- Transcription goes digital
- (2012) Timothée Lionnet et al. EMBO REPORTS
- Noise-mean relationship in mutated promoters
- (2012) G. Hornung et al. GENOME RESEARCH
- Cellular Noise Regulons Underlie Fluctuations in Saccharomyces cerevisiae
- (2012) Jacob Stewart-Ornstein et al. MOLECULAR CELL
- Expression Noise and Acetylation Profiles Distinguish HDAC Functions
- (2012) Leehee Weinberger et al. MOLECULAR CELL
- Live imaging of nascent RNA dynamics reveals distinct types of transcriptional pulse regulation
- (2012) T. Muramoto et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Transcriptional burst frequency and burst size are equally modulated across the human genome
- (2012) R. D. Dar et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Using Gene Expression Noise to Understand Gene Regulation
- (2012) B. Munsky et al. SCIENCE
- Chromosomal Position Effects Are Linked to Sir2-Mediated Variation in Transcriptional Burst Size
- (2011) Cory Batenchuk et al. BIOPHYSICAL JOURNAL
- Origins and consequences of transcriptional discontinuity
- (2011) David M Suter et al. CURRENT OPINION IN CELL BIOLOGY
- What do expression dynamics tell us about the mechanism of transcription?
- (2011) Daniel R Larson CURRENT OPINION IN GENETICS & DEVELOPMENT
- Mapping and analysis of chromatin state dynamics in nine human cell types
- (2011) Jason Ernst et al. NATURE
- Nascent transcript sequencing visualizes transcription at nucleotide resolution
- (2011) L. Stirling Churchman et al. NATURE
- General properties of transcriptional time series in Escherichia coli
- (2011) Lok-hang So et al. NATURE GENETICS
- Mammalian Genes Are Transcribed with Widely Different Bursting Kinetics
- (2011) D. M. Suter et al. SCIENCE
- Real-Time Observation of Transcription Initiation and Elongation on an Endogenous Yeast Gene
- (2011) D. R. Larson et al. SCIENCE
- Dynamic Analysis of Stochastic Transcription Cycles
- (2011) Claire V. Harper et al. PLOS BIOLOGY
- Transcriptional Bursting from the HIV-1 Promoter Is a Significant Source of Stochastic Noise in HIV-1 Gene Expression
- (2010) Abhyudai Singh et al. BIOPHYSICAL JOURNAL
- Methylation of H3K4 Is Required for Inheritance of Active Transcriptional States
- (2010) Tetsuya Muramoto et al. CURRENT BIOLOGY
- Functional roles for noise in genetic circuits
- (2010) Avigdor Eldar et al. NATURE
- Single-allele analysis of transcription kinetics in living mammalian cells
- (2010) Sharon Yunger et al. NATURE METHODS
- Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells
- (2010) Y. Taniguchi et al. SCIENCE
- HIV Promoter Integration Site Primarily Modulates Transcriptional Burst Size Rather Than Frequency
- (2010) Ron Skupsky et al. PLoS Computational Biology
- Visualization of Individual Scr mRNAs during Drosophila Embryogenesis Yields Evidence for Transcriptional Bursting
- (2009) Adam Paré et al. CURRENT BIOLOGY
- Control of Stochastic Gene Expression by Host Factors at the HIV Promoter
- (2009) John C. Burnett et al. PLoS Pathogens
- Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences
- (2008) Arjun Raj et al. CELL
- Two strategies for gene regulation by promoter nucleosomes
- (2008) I. Tirosh et al. GENOME RESEARCH
- Analytical distributions for stochastic gene expression
- (2008) V. Shahrezaei et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started