Integrated Physiological, Proteomic, and Metabolomic Analysis of Ultra Violet (UV) Stress Responses and Adaptation Mechanisms inPinus radiata

The variations in the nuclear proteome reveal new transcription factors and mechanisms involved in UV stress response in Pinus radiata

(2016) Jesús Pascual et al.   Journal of Proteomics

Integrated physiological and hormonal profile of heat-induced thermotolerance inPinus radiata

(2016) Mónica Escandón et al.   TREE PHYSIOLOGY

Targeted quantitative analysis of a diurnal RuBisCO subunit expression and translation profile in Chlamydomonas reinhardtii introducing a novel Mass Western approach

(2015) Luis Recuenco-Muñoz et al.   Journal of Proteomics

Activation of cyclic electron flow by hydrogen peroxide in vivo

(2015) Deserah D. Strand et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

System-level network analysis of nitrogen starvation and recovery in Chlamydomonas reinhardtii reveals potential new targets for increased lipid accumulation

(2014) Luis Valledor et al.   Biotechnology for Biofuels

Improving the quality of protein identification in non-model species. Characterization of Quercus ilex seed and Pinus radiata needle proteomes by using SEQUEST and custom databases

(2014) M. Cristina Romero-Rodríguez et al.   Journal of Proteomics

UV-B mediated metabolic rearrangements in poplar revealed by non-targeted metabolomics

(2014) MORITZ KALING et al.   PLANT CELL AND ENVIRONMENT

A universal protocol for the combined isolation of metabolites, DNA, long RNAs, small RNAs, and proteins from plants and microorganisms

(2014) Luis Valledor et al.   PLANT JOURNAL

Molecular and physiological responses to abiotic stress in forest trees and their relevance to tree improvement

(2014) A. Harfouche et al.   TREE PHYSIOLOGY

Mathematical modeling reveals that metabolic feedback regulation of SnRK1 and hexokinase is sufficient to control sugar homeostasis from energy depletion to full recovery

(2014) Thomas Nägele et al.   Frontiers in Plant Science

Photosystem II photoinhibition-repair cycle protects Photosystem I from irreversible damage

(2013) Mikko Tikkanen et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Proteomics-based investigation of salt-responsive mechanisms in plant roots

(2013) Qi Zhao et al.   Journal of Proteomics

Systemic Cold Stress Adaptation ofChlamydomonas reinhardtii

(2013) Luis Valledor et al.   MOLECULAR & CELLULAR PROTEOMICS

Regulation of mRNA export by the PI3 kinase/AKT signal transduction pathway

(2013) Alexandre Jose Christino Quaresma et al.   MOLECULAR BIOLOGY OF THE CELL

From ozone depletion to agriculture: understanding the role of UV radiation in sustainable crop production

(2013) Jason J. Wargent et al.   NEW PHYTOLOGIST

Emerging concept for the role of photorespiration as an important part of abiotic stress response

(2013) I. Voss et al.   PLANT BIOLOGY

The rice RING E3 ligase, OsCTR1, inhibits trafficking to the chloroplasts of OsCP12 and OsRP1, and its overexpression confers drought tolerance inArabidopsis

(2013) SUNG DON LIM et al.   PLANT CELL AND ENVIRONMENT

The interaction between glucose and cytokinin signal transduction pathway inArabidopsis thaliana

(2013) SUNITA KUSHWAH et al.   PLANT CELL AND ENVIRONMENT

Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data

(2013) MARC LOHSE et al.   PLANT CELL AND ENVIRONMENT

Signal identification for rare and weak features: higher criticism or false discovery rates?

(2012) Bernd Klaus et al.   BIOSTATISTICS

Identification and characterization of fructose 1,6-bisphosphate aldolase genes in Arabidopsis reveal a gene family with diverse responses to abiotic stresses

(2012) Wei Lu et al.   GENE

Photosynthesis, photorespiration, and light signalling in defence responses

(2012) S. Kangasjarvi et al.   JOURNAL OF EXPERIMENTAL BOTANY

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Specialized ribosomes: a new frontier in gene regulation and organismal biology

(2012) Shifeng Xue et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Early induced protein 1 (PrELIP1) and other photosynthetic, stress and epigenetic regulation genes are involved inPinus radiataD. don UV-B radiation response

(2012) Luis Valledor et al.   PHYSIOLOGIA PLANTARUM

The Signal Transducer NPH3 Integrates the Phototropin1 Photosensor with PIN2-Based Polar Auxin Transport in Arabidopsis Root Phototropism

(2012) Y. Wan et al.   PLANT CELL

The Impact of Global Change Factors on Redox Signaling Underpinning Stress Tolerance

(2012) S. Munne-Bosch et al.   PLANT PHYSIOLOGY

Multiple Roles for UV RESISTANCE LOCUS8 in Regulating Gene Expression and Metabolite Accumulation in Arabidopsis under Solar Ultraviolet Radiation

(2012) L. O. Morales et al.   PLANT PHYSIOLOGY

The roles of chloroplast proteases in the biogenesis and maintenance of photosystem II

(2011) Wei Chi et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Transcriptomic, proteomic and metabolomic analysis of UV-B signaling in maize

(2011) Paula Casati et al.   BMC GENOMICS

Ozone depletion and climate change: impacts on UV radiation

(2011) R. L. McKenzie et al.   PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES

Responses in the physiology and biochemistry of Korean pine (Pinus koraiensis) under supplementary UV-B radiation

(2011) Y. G. Zu et al.   PHOTOSYNTHETICA

ROS and redox signalling in the response of plants to abiotic stress

(2011) NOBUHIRO SUZUKI et al.   PLANT CELL AND ENVIRONMENT

Metabolomics reveals comprehensive reprogramming involving two independent metabolic responses of Arabidopsis to UV-B light

(2011) Miyako Kusano et al.   PLANT JOURNAL

Regulation of plant cytosolic aldolase functions by redox-modifications

(2011) Karina van der Linde et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Myo-inositol and beyond – Emerging networks under stress

(2011) Ravi Valluru et al.   PLANT SCIENCE

Increased tolerance to salt stress in the phosphate-accumulating Arabidopsis mutants siz1 and pho2

(2011) Kenji Miura et al.   PLANTA

Arabidopsis thaliana MIRO1 and MIRO2 GTPases Are Unequally Redundant in Pollen Tube Growth and Fusion of Polar Nuclei during Female Gametogenesis

(2011) Christopher G. Sørmo et al.   PLoS One

Regulation of cyclic and linear electron flow in higher plants

(2011) Pierre Joliot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolite changes with induction ofCuscutahaustorium and translocation from host plants

(2011) Takeshi Furuhashi et al.   Journal of Plant Interactions

Transcriptome changes in grapevine (Vitis vinifera L.) cv. Malbec leaves induced by ultraviolet-B radiation

(2010) Mariela A Pontin et al.   BMC PLANT BIOLOGY

The SOS screen in Arabidopsis: A search for functions involved in DNA metabolism

(2010) Nicolas Siaud et al.   DNA REPAIR

Molecular Mechanisms Regulating Rapid Stress Signaling Networks inArabidopsis

(2010) Justin W. Walley et al.   Journal of Integrative Plant Biology

Combined Proteomic and Transcriptomic Analysis Identifies Differentially Expressed Pathways Associated toPinus radiataNeedle Maturation

(2010) Luis Valledor et al.   JOURNAL OF PROTEOME RESEARCH

Back to the basics: Maximizing the information obtained by quantitative two dimensional gel electrophoresis analyses by an appropriate experimental design and statistical analyses

(2010) Luis Valledor et al.   Journal of Proteomics

Multiple functional roles of flavonoids in photoprotection

(2010) Giovanni Agati et al.   NEW PHYTOLOGIST

Alternative Electron Flows (Water–Water Cycle and Cyclic Electron Flow Around PSI) in Photosynthesis: Molecular Mechanisms and Physiological Functions

(2010) Chikahiro Miyake   PLANT AND CELL PHYSIOLOGY

An Arabidopsis Mutant with High Cyclic Electron Flow around Photosystem I (hcef) Involving the NADPH Dehydrogenase Complex

(2010) A. K. Livingston et al.   PLANT CELL

Endoplasmic Reticulum Protein Quality Control and Its Relationship to Environmental Stress Responses in Plants

(2010) Jian-Xiang Liu et al.   PLANT CELL

FtsH2 and FtsH5: two homologous subunits use different integration mechanisms leading to the same thylakoid multimeric complex

(2010) Ricardo A. O. Rodrigues et al.   PLANT JOURNAL

Genome-wide analysis of helicase gene family from rice and Arabidopsis: a comparison with yeast and human

(2010) Pavan Umate et al.   PLANT MOLECULAR BIOLOGY

Plant L10 Ribosomal Proteins Have Different Roles during Development and Translation under Ultraviolet-B Stress

(2010) M. L. F. Ferreyra et al.   PLANT PHYSIOLOGY

Mitochondrial Malate Dehydrogenase Lowers Leaf Respiration and Alters Photorespiration and Plant Growth in Arabidopsis

(2010) T. Tomaz et al.   PLANT PHYSIOLOGY

FiehnLib: Mass Spectral and Retention Index Libraries for Metabolomics Based on Quadrupole and Time-of-Flight Gas Chromatography/Mass Spectrometry

(2009) Tobias Kind et al.   ANALYTICAL CHEMISTRY

Signal Transduction in Responses to UV-B Radiation

(2009) Gareth I. Jenkins   Annual Review of Plant Biology

Photorespiratory Metabolism: Genes, Mutants, Energetics, and Redox Signaling

(2009) Christine H. Foyer et al.   Annual Review of Plant Biology

Interaction of COP1 and UVR8 regulates UV-B-induced photomorphogenesis and stress acclimation in Arabidopsis

(2009) Jean-Jacques Favory et al.   EMBO JOURNAL

Unravelling the regulatory mechanisms that modulate the MEP pathway in higher plants

(2009) E. Cordoba et al.   JOURNAL OF EXPERIMENTAL BOTANY

UV-B-responsive microRNAs in Populus tremula

(2009) Xiaoyun Jia et al.   JOURNAL OF PLANT PHYSIOLOGY

Metabolomic and physiological responses reveal multi-phasic acclimation ofArabidopsis thalianato chronic UV radiation

(2009) JANICE A. LAKE et al.   PLANT CELL AND ENVIRONMENT

Functional Characterization of Poplar Wood-Associated NAC Domain Transcription Factors

(2009) R. Zhong et al.   PLANT PHYSIOLOGY

Redox Regulation in Photosynthetic Organisms: Signaling, Acclimation, and Practical Implications

(2008) Christine H. Foyer et al.   ANTIOXIDANTS & REDOX SIGNALING

Histone Acetylation and Chromatin Remodeling Are Required for UV-B-Dependent Transcriptional Activation of Regulated Genes in Maize

(2008) P. Casati et al.   PLANT CELL

Interaction of the Arabidopsis UV-B-Specific Signaling Component UVR8 with Chromatin

(2007) Catherine Cloix et al.   Molecular Plant