标题
The mzIdentML Data Standard Version 1.2, Supporting Advances in Proteome Informatics
作者
关键词
-
出版物
MOLECULAR & CELLULAR PROTEOMICS
Volume 16, Issue 7, Pages 1275-1285
出版商
American Society for Biochemistry & Molecular Biology (ASBMB)
发表日期
2017-05-18
DOI
10.1074/mcp.m117.068429
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- OpenMS: a flexible open-source software platform for mass spectrometry data analysis
- (2016) Hannes L Röst et al. NATURE METHODS
- Crosslinking and Mass Spectrometry: An Integrated Technology to Understand the Structure and Function of Molecular Machines
- (2016) Alexander Leitner et al. TRENDS IN BIOCHEMICAL SCIENCES
- ms-data-core-api: an open-source, metadata-oriented library for computational proteomics: Fig. 1.
- (2015) Yasset Perez-Riverol et al. BIOINFORMATICS
- PIA: An Intuitive Protein Inference Engine with a Web-Based User Interface
- (2015) Julian Uszkoreit et al. JOURNAL OF PROTEOME RESEARCH
- ProCon — PROteomics CONversion tool
- (2015) Gerhard Mayer et al. Journal of Proteomics
- Serum Albumin Domain Structures in Human Blood Serum by Mass Spectrometry and Computational Biology
- (2015) Adam Belsom et al. MOLECULAR & CELLULAR PROTEOMICS
- PRIDE Inspector Toolsuite: Moving Toward a Universal Visualization Tool for Proteomics Data Standard Formats and Quality Assessment of ProteomeXchange Datasets
- (2015) Yasset Perez-Riverol et al. MOLECULAR & CELLULAR PROTEOMICS
- PeptideShaker enables reanalysis of MS-derived proteomics data sets
- (2015) Marc Vaudel et al. NATURE BIOTECHNOLOGY
- Representation of selected-reaction monitoring data in the mzQuantML data standard
- (2015) Da Qi et al. PROTEOMICS
- Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop
- (2015) Andrej Sali et al. STRUCTURE
- The mzTab Data Exchange Format: Communicating Mass-spectrometry-based Proteomics and Metabolomics Experimental Results to a Wider Audience
- (2014) Johannes Griss et al. MOLECULAR & CELLULAR PROTEOMICS
- Proteogenomics: concepts, applications and computational strategies
- (2014) Alexey I Nesvizhskii NATURE METHODS
- How to submit MS proteomics data to ProteomeXchange via the PRIDE database
- (2014) Tobias Ternent et al. PROTEOMICS
- A standardized framing for reporting protein identifications in mzIdentML 1.2
- (2014) Sean L. Seymour et al. PROTEOMICS
- ProteoAnnotator - Open source proteogenomics annotation software supporting PSI standards
- (2014) Fawaz Ghali et al. PROTEOMICS
- MS-GF+ makes progress towards a universal database search tool for proteomics
- (2014) Sangtae Kim et al. Nature Communications
- The mzQuantML Data Standard for Mass Spectrometry–based Quantitative Studies in Proteomics
- (2013) Mathias Walzer et al. MOLECULAR & CELLULAR PROTEOMICS
- Tools (Viewer, Library and Validator) that Facilitate Use of the Peptide and Protein Identification Standard Format, Termed mzIdentML
- (2013) Fawaz Ghali et al. MOLECULAR & CELLULAR PROTEOMICS
- Matching Cross-linked Peptide Spectra: Only as Good as the Worse Identification
- (2013) Michael J. Trnka et al. MOLECULAR & CELLULAR PROTEOMICS
- The HUPO proteomics standards initiative- mass spectrometry controlled vocabulary
- (2013) G. Mayer et al. Database-The Journal of Biological Databases and Curation
- Mass Spectrometry: Reconnaissance at the Frontiers of Biology
- (2012) Alma L. Burlingame et al. MOLECULAR & CELLULAR PROTEOMICS
- Modification Site Localization Scoring: Strategies and Performance
- (2012) Robert J. Chalkley et al. MOLECULAR & CELLULAR PROTEOMICS
- A cross-platform toolkit for mass spectrometry and proteomics
- (2012) Matthew C Chambers et al. NATURE BIOTECHNOLOGY
- jmzIdentML API: A Java interface to the mzIdentML standard for peptide and protein identification data
- (2012) Florian Reisinger et al. PROTEOMICS
- iProphet: Multi-level Integrative Analysis of Shotgun Proteomic Data Improves Peptide and Protein Identification Rates and Error Estimates
- (2011) David Shteynberg et al. MOLECULAR & CELLULAR PROTEOMICS
- Hierarchical Clustering of Shotgun Proteomics Data
- (2011) Ville R. Koskinen et al. MOLECULAR & CELLULAR PROTEOMICS
- PEAKS DB:De NovoSequencing Assisted Database Search for Sensitive and Accurate Peptide Identification
- (2011) Jing Zhang et al. MOLECULAR & CELLULAR PROTEOMICS
- mzML—a Community Standard for Mass Spectrometry Data
- (2010) Lennart Martens et al. MOLECULAR & CELLULAR PROTEOMICS
- Scaffold: A bioinformatic tool for validating MS/MS-based proteomic studies
- (2010) Brian C. Searle PROTEOMICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- The PSI semantic validator: A framework to check MIAPE compliance of proteomics data
- (2009) Luisa Montecchi-Palazzi et al. PROTEOMICS
- Improving sensitivity in proteome studies by analysis of false discovery rates for multiple search engines
- (2009) Andrew R. Jones et al. PROTEOMICS
- Improving Sensitivity by Probabilistically Combining Results from Multiple MS/MS Search Methodologies
- (2008) Brian C. Searle et al. JOURNAL OF PROTEOME RESEARCH
- Rapid and Accurate Peptide Identification from Tandem Mass Spectra
- (2008) Christopher Y. Park et al. JOURNAL OF PROTEOME RESEARCH
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