Influence of diet on the gut microbiome and implications for human health

Beneficial Effects of Fecal Microbiota Transplantation on Ulcerative Colitis in Mice

(2016) Zhihui Tian et al.   DIGESTIVE DISEASES AND SCIENCES

Immunomodulation properties of multi-species fermented milks

(2016) Benoît Foligné et al.   FOOD MICROBIOLOGY

Frozen vs Fresh Fecal Microbiota Transplantation and Clinical Resolution of Diarrhea in Patients With RecurrentClostridium difficileInfection

(2016) Christine H. Lee et al.   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

Role of gut microbiota and nutrients in amyloid formation and pathogenesis of Alzheimer disease

(2016) Francesca Pistollato et al.   NUTRITION REVIEWS

Gut microbiota in autism and mood disorders

(2016) Francesca Mangiola   WORLD JOURNAL OF GASTROENTEROLOGY

Mucosa-attached bacterial community in Crohn's disease coheres with the clinical disease activity index

(2016) Holger Schäffler et al.   Environmental Microbiology Reports

The influence of a short-term gluten-free diet on the human gut microbiome

(2016) Marc Jan Bonder et al.   Genome Medicine

Decrease in lactobacilli in the intestinal microbiota of celiac children with a gluten-free diet, and selection of potentially probiotic strains

(2015) María J. Lorenzo Pisarello et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Immunotherapy Not Working? Check Your Microbiota

(2015) Nathan R. West et al.   CANCER CELL

Siri, What Should I Eat?

(2015) Reiner Jumpertz von Schwartzenberg et al.   CELL

Crosstalk between Gut Microbiota and Dietary Lipids Aggravates WAT Inflammation through TLR Signaling

(2015) Robert Caesar et al.   Cell Metabolism

The role of immunomodulators on intestinal barrier homeostasis in experimental models

(2015) Maria Emília Rabelo Andrade et al.   CLINICAL NUTRITION

Cardiovascular Complications in Inflammatory Bowel Disease

(2015) Rudolf Schicho et al.   CURRENT DRUG TARGETS

Adherence to Mediterranean diet and 10-year incidence (2002-2012) of diabetes: correlations with inflammatory and oxidative stress biomarkers in the ATTICA cohort study

(2015) E. Koloverou et al.   DIABETES-METABOLISM RESEARCH AND REVIEWS

Food, Immunity, and the Microbiome

(2015) Herbert Tilg et al.   GASTROENTEROLOGY

Effect of administering a multi-species probiotic mixture on the changes in fecal microbiota and symptoms of irritable bowel syndrome: a randomized, double-blind, placebo-controlled trial

(2015) Hyuk Yoon et al.   JOURNAL OF CLINICAL BIOCHEMISTRY AND NUTRITION

Probiotics, prebiotics and synbiotics- a review

(2015) Kavita. R. Pandey et al.   JOURNAL OF FOOD SCIENCE AND TECHNOLOGY-MYSORE

Anticancer immunotherapy by CTLA-4 blockade relies on the gut microbiota

(2015) M. Vetizou et al.   SCIENCE

Novel approaches to treatingClostridium difficile-associated colitis

(2015) David Padua et al.   Expert Review of Gastroenterology & Hepatology

Changes in Gut Microbiota in Rats Fed a High Fat Diet Correlate with Obesity-Associated Metabolic Parameters

(2015) Virginie Lecomte et al.   PLoS One

Burn Injury Alters the Intestinal Microbiome and Increases Gut Permeability and Bacterial Translocation

(2015) Zachary M. Earley et al.   PLoS One

Altered Duodenal Microbiota Composition in Celiac Disease Patients Suffering From Persistent Symptoms on a Long-Term Gluten-Free Diet

(2014) Pirjo Wacklin et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Lactobacillus plantarum IFPL935 impacts colonic metabolism in a simulator of the human gut microbiota during feeding with red wine polyphenols

(2014) E. Barroso et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Human Genetics Shape the Gut Microbiome

(2014) Julia K. Goodrich et al.   CELL

Role of the Microbiota in Immunity and Inflammation

(2014) Yasmine Belkaid et al.   CELL

Starving our Microbial Self: The Deleterious Consequences of a Diet Deficient in Microbiota-Accessible Carbohydrates

(2014) Erica D. Sonnenburg et al.   Cell Metabolism

Low Protein Intake Is Associated with a Major Reduction in IGF-1, Cancer, and Overall Mortality in the 65 and Younger but Not Older Population

(2014) Morgan E. Levine et al.   Cell Metabolism

Meta-analyses of human gut microbes associated with obesity and IBD

(2014) William A. Walters et al.   FEBS LETTERS

Diets that differ in their FODMAP content alter the colonic luminal microenvironment

(2014) Emma P Halmos et al.   GUT

Exercise and associated dietary extremes impact on gut microbial diversity

(2014) Siobhan F Clarke et al.   GUT

Mediterranean Diet and Health: Food Effects on Gut Microbiota and Disease Control

(2014) Federica Del Chierico et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Pilot Study of Diet and Microbiota: Interactive Associations of Fibers and Polyphenols with Human Intestinal Bacteria

(2014) Adriana Cuervo et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Improvement of digestive health and reduction in proteobacterial populations in the gut microbiota of cystic fibrosis patients using a Lactobacillus reuteri probiotic preparation: A double blind prospective study

(2014) Rosa del Campo et al.   Journal of Cystic Fibrosis

Differential Activation of Human TLR4 by Escherichia coli and Shigella flexneri 2a Lipopolysaccharide: Combined Effects of Lipid A Acylation State and TLR4 Polymorphisms on Signaling

(2014) P. Rallabhandi et al.   JOURNAL OF IMMUNOLOGY

Gut Microbial Metabolites of Polyunsaturated Fatty Acids Correlate with Specific Fecal Bacteria and Serum Markers of Metabolic Syndrome in Obese Women

(2014) Céline Druart et al.   LIPIDS

Effect of Probiotic (VSL#3) and Omega-3 on Lipid Profile, Insulin Sensitivity, Inflammatory Markers, and Gut Colonization in Overweight Adults: A Randomized, Controlled Trial

(2014) Hemalatha Rajkumar et al.   MEDIATORS OF INFLAMMATION

Gut microbiota metabolism of dietary fiber influences allergic airway disease and hematopoiesis

(2014) Aurélien Trompette et al.   NATURE MEDICINE

A Western Diet Ecological Module Identified from the ‘Humanized’ Mouse Microbiota Predicts Diet in Adults and Formula Feeding in Children

(2014) Jay Siddharth et al.   PLoS One

Circadian Disorganization Alters Intestinal Microbiota

(2014) Robin M. Voigt et al.   PLoS One

Gut Microbiota as an Epigenetic Regulator: Pilot Study Based on Whole-Genome Methylation Analysis

(2014) Himanshu Kumar et al.   mBio

Dietary Whole Grain–Microbiota Interactions: Insights into Mechanisms for Human Health

(2014) Nancy L. Keim et al.   Advances in Nutrition

Microbiota and epigenetic regulation of inflammatory mediators in type 2 diabetes and obesity

(2014) M. Remely et al.   Beneficial Microbes

Decreased Bacterial Diversity Characterizes the Altered Gut Microbiota in Patients With Psoriatic Arthritis, Resembling Dysbiosis in Inflammatory Bowel Disease

(2014) Jose U. Scher et al.   Arthritis & Rheumatology

Gut Microbiota-Derived Short-Chain Fatty Acids, T Cells, and Inflammation

(2014) Chang H. Kim et al.   Immune Network

Decreased dietary fiber intake and structural alteration of gut microbiota in patients with advanced colorectal adenoma

(2013) Hui-Min Chen et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Prebiotic effects of almonds and almond skins on intestinal microbiota in healthy adult humans

(2013) Zhibin Liu et al.   ANAEROBE

Effect of salmon consumption during pregnancy on maternal and infant faecal microbiota, secretory IgA and calprotectin

(2013) Heidi J. Urwin et al.   BRITISH JOURNAL OF NUTRITION

Microbiota Modulate Behavioral and Physiological Abnormalities Associated with Neurodevelopmental Disorders

(2013) Elaine Y. Hsiao et al.   CELL

Faecalibacterium prausnitzii and human intestinal health

(2013) S Miquel et al.   CURRENT OPINION IN MICROBIOLOGY

Assessing the Human Gut Microbiota in Metabolic Diseases

(2013) F. Karlsson et al.   DIABETES

Effects of short chain fatty acid producing bacteria on epigenetic regulation of FFAR3 in type 2 diabetes and obesity

(2013) Marlene Remely et al.   GENE

A decrease of the butyrate-producing speciesRoseburia hominisandFaecalibacterium prausnitziidefines dysbiosis in patients with ulcerative colitis

(2013) Kathleen Machiels et al.   GUT

Effect of Probiotics on Inducing Remission and Maintaining Therapy in Ulcerative Colitis, Crohnʼs Disease, and Pouchitis

(2013) Jun Shen et al.   INFLAMMATORY BOWEL DISEASES

Effects of Wheat Bran Extract Containing Arabinoxylan Oligosaccharides on Gastrointestinal Parameters in Healthy Preadolescent Children

(2013) Isabelle E.J.A. François et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells

(2013) Yukihiro Furusawa et al.   NATURE

Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation

(2013) Nicholas Arpaia et al.   NATURE

Dietary intervention impact on gut microbial gene richness

(2013) Aurélie Cotillard et al.   NATURE

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

Intestinal microbiota metabolism of l-carnitine, a nutrient in red meat, promotes atherosclerosis

(2013) Robert A Koeth et al.   NATURE MEDICINE

Trametes versicolor Extract Modifies Human Fecal Microbiota Composition In vitro

(2013) Zhuo-Teng Yu et al.   PLANT FOODS FOR HUMAN NUTRITION

The Microbial Metabolites, Short-Chain Fatty Acids, Regulate Colonic Treg Cell Homeostasis

(2013) P. M. Smith et al.   SCIENCE

Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice

(2013) V. K. Ridaura et al.   SCIENCE

Diet-Microbiota Interactions and Their Implications for Healthy Living

(2013) Ian Jeffery et al.   Nutrients

Influence of red wine polyphenols and ethanol on the gut microbiota ecology and biochemical biomarkers

(2012) María Isabel Queipo-Ortuño et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

In vitrofermentation of grape seed flavan-3-ol fractions by human faecal microbiota: changes in microbial groups and phenolic metabolites

(2012) Carolina Cueva et al.   FEMS MICROBIOLOGY ECOLOGY

Transfer of Intestinal Microbiota From Lean Donors Increases Insulin Sensitivity in Individuals With Metabolic Syndrome

(2012) Anne Vrieze et al.   GASTROENTEROLOGY

Butyricicoccus pullicaecorumin inflammatory bowel disease

(2012) Venessa Eeckhaut et al.   GUT

Probiotics-Containing Yogurts Suppress Helicobacter pylori Load and Modify Immune Response and Intestinal Microbiota in the Helicobacter pylori-Infected Children

(2012) Yao-Jong Yang et al.   HELICOBACTER

The type and quantity of dietary fat and carbohydrate alter faecal microbiome and short-chain fatty acid excretion in a metabolic syndrome ‘at-risk’ population

(2012) F Fava et al.   INTERNATIONAL JOURNAL OF OBESITY

Gut microbiome composition is linked to whole grain-induced immunological improvements

(2012) Inés Martínez et al.   ISME Journal

In Vitro Fermentation of a Red Wine Extract by Human Gut Microbiota: Changes in Microbial Groups and Formation of Phenolic Metabolites

(2012) Fernando Sánchez-Patán et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Fermented milk supplemented with probiotics and prebiotics can effectively alter the intestinal microbiota and immunity of host animals

(2012) S. Wang et al.   JOURNAL OF DAIRY SCIENCE

Endotoxin increase after fat overload is related to postprandial hypertriglyceridemia in morbidly obese patients

(2012) M. Clemente-Postigo et al.   JOURNAL OF LIPID RESEARCH

Clinical Effects of Probiotic Bifidobacterium longum BB536 on Immune Function and Intestinal Microbiota in Elderly Patients Receiving Enteral Tube Feeding

(2012) Hiroyasu Akatsu et al.   JOURNAL OF PARENTERAL AND ENTERAL NUTRITION

Specific Dietary Preferences Are Linked to Differing Gut Microbial Metabolic Activity in Response to Dark Chocolate Intake

(2012) Francois-Pierre J. Martin et al.   JOURNAL OF PROTEOME RESEARCH

Effects of green tea consumption on human fecal microbiota with special reference toBifidobacteriumspecies

(2012) Jong-Sik Jin et al.   MICROBIOLOGY AND IMMUNOLOGY

A metagenome-wide association study of gut microbiota in type 2 diabetes

(2012) Junjie Qin et al.   NATURE

Diversity, stability and resilience of the human gut microbiota

(2012) Catherine A. Lozupone et al.   NATURE

Gut–liver axis: The impact of gut microbiota on non alcoholic fatty liver disease

(2012) D. Compare et al.   NUTRITION METABOLISM AND CARDIOVASCULAR DISEASES

Effect of lactose on gut microbiota and metabolome of infants with cow’s milk allergy

(2012) Ruggiero Francavilla et al.   PEDIATRIC ALLERGY AND IMMUNOLOGY

High-protein, reduced-carbohydrate weight-loss diets promote metabolite profiles likely to be detrimental to colonic health

(2011) Wendy R Russell et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Impact of polydextrose on the faecal microbiota: a double-blind, crossover, placebo-controlled feeding study in healthy human subjects

(2011) Adele Costabile et al.   BRITISH JOURNAL OF NUTRITION

A vegan or vegetarian diet substantially alters the human colonic faecal microbiota

(2011) J Zimmer et al.   EUROPEAN JOURNAL OF CLINICAL NUTRITION

The study on the impact of glycated pea proteins on human intestinal bacteria

(2011) Świątecka Dominika et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Effects of non-fermented and fermented soybean milk intake on faecal microbiota and faecal metabolites in humans

(2011) Shunsuke Inoguchi et al.   INTERNATIONAL JOURNAL OF FOOD SCIENCES AND NUTRITION

Six-Week Consumption of a Wild Blueberry Powder Drink Increases Bifidobacteria in the Human Gut

(2011) Stefano Vendrame et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Specific prebiotics modulate gut microbiota and immune activation in HAART-naive HIV-infected adults: results of the “COPA” pilot randomized trial

(2011) A Gori et al.   Mucosal Immunology

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

The Genome of Akkermansia muciniphila, a Dedicated Intestinal Mucin Degrader, and Its Use in Exploring Intestinal Metagenomes

(2011) Mark W. J. van Passel et al.   PLoS One

Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease

(2011) S. Greenblum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Prebiotic evaluation of cocoa-derived flavanols in healthy humans by using a randomized, controlled, double-blind, crossover intervention study

(2010) Xenofon Tzounis et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Animal Protein Intake and Risk of Inflammatory Bowel Disease: The E3N Prospective Study

(2010) Prévost Jantchou et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Protective effects of Lactobacillus paracasei F19 in a rat model of oxidative and metabolic hepatic injury

(2010) Gerardo Nardone et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

The Human Gut Microbiome: Ecology and Recent Evolutionary Changes

(2010) Jens Walter et al.   Annual Review of Microbiology

Determination of the in vivo prebiotic potential of a maize-based whole grain breakfast cereal: a human feeding study

(2010) Andrew L. Carvalho-Wells et al.   BRITISH JOURNAL OF NUTRITION

Role of Bacteria in Oncogenesis

(2010) A. H. Chang et al.   CLINICAL MICROBIOLOGY REVIEWS

Differential Adaptation of Human Gut Microbiota to Bariatric Surgery-Induced Weight Loss: Links With Metabolic and Low-Grade Inflammation Markers

(2010) J.-P. Furet et al.   DIABETES

Identification of the 100 richest dietary sources of polyphenols: an application of the Phenol-Explorer database

(2010) J Pérez-Jiménez et al.   EUROPEAN JOURNAL OF CLINICAL NUTRITION

Gut-Residing Segmented Filamentous Bacteria Drive Autoimmune Arthritis via T Helper 17 Cells

(2010) Hsin-Jung Wu et al.   IMMUNITY

Dysbiosis of fecal microbiota in Crohnʼs disease patients as revealed by a custom phylogenetic microarray

(2010) Seungha Kang et al.   INFLAMMATORY BOWEL DISEASES

The influence of pomegranate by-product and punicalagins on selected groups of human intestinal microbiota

(2010) Dobroslawa Bialonska et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Dominant and diet-responsive groups of bacteria within the human colonic microbiota

(2010) Alan W Walker et al.   ISME Journal

Effects of a probiotic fermented milk beverage containing Lactobacillus casei strain Shirota on defecation frequency, intestinal microbiota, and the intestinal environment of healthy individuals with soft stools

(2010) Kazumasa Matsumoto et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Probiotic Yogurt Effects on Intestinal Flora of Patients with Chronic Liver Disease

(2010) Jun-E Liu et al.   NURSING RESEARCH

Generation of regulatory dendritic cells and CD4+Foxp3+ T cells by probiotics administration suppresses immune disorders

(2010) H.-K. Kwon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

(2010) C. De Filippo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Has the Microbiota Played a Critical Role in the Evolution of the Adaptive Immune System?

(2010) Y. K. Lee et al.   SCIENCE

Effects of a gluten-free diet on gut microbiota and immune function in healthy adult human subjects

(2009) Giada De Palma et al.   BRITISH JOURNAL OF NUTRITION

Induction of Intestinal Th17 Cells by Segmented Filamentous Bacteria

(2009) Ivaylo I. Ivanov et al.   CELL

Saccharomyces boulardii Inhibits EGF Receptor Signaling and Intestinal Tumor Growth in Apcmin Mice

(2009) Xinhua Chen et al.   GASTROENTEROLOGY

The Key Role of Segmented Filamentous Bacteria in the Coordinated Maturation of Gut Helper T Cell Responses

(2009) Valérie Gaboriau-Routhiau et al.   IMMUNITY

The ecology, epidemiology and virulence of Enterococcus

(2009) K. Fisher et al.   MICROBIOLOGY-SGM

Microbiota and SCFA in Lean and Overweight Healthy Subjects

(2009) Andreas Schwiertz et al.   Obesity

Gut flora, Toll-like receptors and nuclear receptors: a tripartite communication that tunes innate immunity in large intestine

(2008) Annelie Lundin et al.   CELLULAR MICROBIOLOGY

In Vitro Fermentation of Oat Bran Obtained by Debranning with a Mixed Culture of Human Fecal Bacteria

(2008) Gopal Kedia et al.   CURRENT MICROBIOLOGY

Changes in Gut Microbiota Control Metabolic Endotoxemia-Induced Inflammation in High-Fat Diet-Induced Obesity and Diabetes in Mice

(2008) P. D. Cani et al.   DIABETES

The potential influence of fruit polyphenols on colonic microflora and human gut health

(2008) Shanthi G. Parkar et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY