标题
Metatranscriptomic census of active protists in soils
作者
关键词
-
出版物
ISME Journal
Volume 9, Issue 10, Pages 2178-2190
出版商
Springer Nature
发表日期
2015-03-27
DOI
10.1038/ismej.2015.30
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Genetic analysis among environmental strains of Balamuthia mandrillaris recovered from an artificial lagoon and from soil in Sonora, Mexico
- (2014) Luis Fernando Lares-Jiménez et al. EXPERIMENTAL PARASITOLOGY
- Effects of long-term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach
- (2014) Guillaume Lentendu et al. MOLECULAR ECOLOGY
- Soil is the origin for the presence of Naegleria fowleri in the thermal recreational waters
- (2014) Mirna Moussa et al. PARASITOLOGY RESEARCH
- Acanthamoeba everywhere: high diversity of Acanthamoeba in soils
- (2014) Stefan Geisen et al. PARASITOLOGY RESEARCH
- Soil water availability strongly alters the community composition of soil protists
- (2014) Geisen Stefan et al. PEDOBIOLOGIA
- Discrepancy between Species Borders at Morphological and Molecular Levels in the Genus Cochliopodium (Amoebozoa, Himatismenida), with the Description of Cochliopodium plurinucleolum n. sp.
- (2014) Stefan Geisen et al. PROTIST
- Assimilation of Cellulose-Derived Carbon by Microeukaryotes in Oxic and Anoxic Slurries of an Aerated Soil
- (2013) Antonis Chatzinotas et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Microbial community structure and functioning in marine sediments associated with diffuse hydrothermal venting assessed by integrated meta-omics
- (2013) Tim Urich et al. ENVIRONMENTAL MICROBIOLOGY
- A morphogenetic survey on ciliate plankton from a mountain lake pinpoints the necessity of lineage-specific barcode markers in microbial ecology
- (2013) Thorsten Stoeck et al. ENVIRONMENTAL MICROBIOLOGY
- Phylogenetic interpretations and ecological potentials of the Mesomycetozoea (Ichthyosporea)
- (2013) Sally L. Glockling et al. Fungal Ecology
- Below-ground fine-scale distribution and soil versus fine root detection of fungal and soil oomycete communities in a French beech forest
- (2013) Aurore Coince et al. Fungal Ecology
- Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants
- (2013) Thomas R Turner et al. ISME Journal
- Impacts of inundation and drought on eukaryote biodiversity in semi-arid floodplain soils
- (2013) Darren S. Baldwin et al. MOLECULAR ECOLOGY
- Can Abundance of Protists Be Inferred from Sequence Data: A Case Study of Foraminifera
- (2013) Alexandra A-T. Weber et al. PLoS One
- Multigene Phylogenetic Reconstruction of the Tubulinea (Amoebozoa) Corroborates Four of the Six Major Lineages, while Additionally Revealing that Shell Composition Does not Predict Phylogeny in the Arcellinida
- (2013) Daniel J.G. Lahr et al. PROTIST
- Extremely High Copy Numbers and Polymorphisms of the rDNA Operon Estimated from Single Cell Analysis of Oligotrich and Peritrich Ciliates
- (2013) Jun Gong et al. PROTIST
- Amplification primers of SSU rDNA for soil protists
- (2013) Sina M. Adl et al. SOIL BIOLOGY & BIOCHEMISTRY
- Metatranscriptomics of the marine sponge Geodia barretti: tackling phylogeny and function of its microbial community
- (2012) Regina Radax et al. ENVIRONMENTAL MICROBIOLOGY
- Knowledge of morphology is still required when identifying new amoeba isolates by molecular techniques
- (2012) Johan F. De Jonckheere et al. EUROPEAN JOURNAL OF PROTISTOLOGY
- Cryptic diversity within the choanoflagellate morphospecies complex Codosiga botrytis – Phylogeny and morphology of ancient and modern isolates
- (2012) Daniel Stoupin et al. EUROPEAN JOURNAL OF PROTISTOLOGY
- Global biogeography of highly diverse protistan communities in soil
- (2012) Scott T Bates et al. ISME Journal
- Accuracy of protist diversity assessments: morphology compared with cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study
- (2012) Charles Bachy et al. ISME Journal
- Organic carbon transformations in high-Arctic peat soils: key functions and microorganisms
- (2012) Alexander Tveit et al. ISME Journal
- The Revised Classification of Eukaryotes
- (2012) Sina M. Adl et al. JOURNAL OF EUKARYOTIC MICROBIOLOGY
- jModelTest 2: more models, new heuristics and parallel computing
- (2012) Diego Darriba et al. NATURE METHODS
- On a Cercopithifilaria sp. transmitted by Rhipicephalus sanguineus: a neglected, but widespread filarioid of dogs
- (2012) Domenico Otranto et al. Parasites & Vectors
- Identification and Detection ofPhytophthora: Reviewing Our Progress, Identifying Our Needs
- (2012) Frank N. Martin et al. PLANT DISEASE
- CREST – Classification Resources for Environmental Sequence Tags
- (2012) Anders Lanzén et al. PLoS One
- CBOL Protist Working Group: Barcoding Eukaryotic Richness beyond the Animal, Plant, and Fungal Kingdoms
- (2012) Jan Pawlowski et al. PLOS BIOLOGY
- Exploring and quantifying fungal diversity in freshwater lake ecosystems using rDNA cloning/sequencing and SSU tag pyrosequencing
- (2011) Sébastien Monchy et al. ENVIRONMENTAL MICROBIOLOGY
- Exploring the composition and diversity of microbial communities at the Jan Mayen hydrothermal vent field using RNA and DNA
- (2011) Anders Lanzén et al. FEMS MICROBIOLOGY ECOLOGY
- A Revised Classification of Naked Lobose Amoebae (Amoebozoa: Lobosa)
- (2011) Alexey V. Smirnov et al. PROTIST
- Molecular evidence for widespread occurrence of Foraminifera in soils
- (2010) Franck Lejzerowicz et al. ENVIRONMENTAL MICROBIOLOGY
- Invalidation ofHyperamoebaby Transferring its Species to Other Genera of Myxogastria
- (2010) ANNA MARIA FIORE-DONNO et al. JOURNAL OF EUKARYOTIC MICROBIOLOGY
- Diversity in a hidden world: potential and limitation of next-generation sequencing for surveys of molecular diversity of eukaryotic microorganisms
- (2010) RALPH MEDINGER et al. MOLECULAR ECOLOGY
- Belowground carbon allocation by trees drives seasonal patterns of extracellular enzyme activities by altering microbial community composition in a beech forest soil
- (2010) Christina Kaiser et al. NEW PHYTOLOGIST
- Highly Diverse and Seasonally Dynamic Protist Community in a Pristine Peat Bog
- (2010) Enrique Lara et al. PROTIST
- Polymerase chain reaction primers miss half of rRNA microbial diversity
- (2009) SunHee Hong et al. ISME Journal
- SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building
- (2009) M. Gouy et al. MOLECULAR BIOLOGY AND EVOLUTION
- A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
- (2009) Linda A. Amaral-Zettler et al. PLoS One
- Phylogeny, Taxonomy, and Astounding Genetic Diversity of Glissomonadida ord. nov., The Dominant Gliding Zooflagellates in Soil (Protozoa: Cercozoa)
- (2009) Alexis T. Howe et al. PROTIST
- The Life History of Flabellula baltica Smirnov (Gymnamoebae, Rhizopoda): Adaptations to a Spatially and Temporally Heterogeneous Environment
- (2009) Tom Fenchel PROTIST
- Environmental rRNA inventories miss over half of protistan diversity
- (2008) Sunok Jeon et al. BMC MICROBIOLOGY
- Elevated atmospheric CO2affects soil microbial diversity associated with trembling aspen
- (2008) Celine Lesaulnier et al. ENVIRONMENTAL MICROBIOLOGY
- Genetic Diversity of Eukaryotic Microorganisms in Lake Taihu, a Large Shallow Subtropical Lake in China
- (2008) Meijun Chen et al. MICROBIAL ECOLOGY
- Simultaneous Assessment of Soil Microbial Community Structure and Function through Analysis of the Meta-Transcriptome
- (2008) Tim Urich et al. PLoS One
- Correct identification of species makes the amoebozoan rRNA tree congruent with morphology for the order Leptomyxida Page 1987; with description of Acramoeba dendroida n. g., n. sp., originally misidentified as ‘Gephyramoeba sp.’
- (2007) Alexey V. Smirnov et al. EUROPEAN JOURNAL OF PROTISTOLOGY
- New insights into animal pathogenic oomycetes
- (2007) Andrew J. Phillips et al. TRENDS IN MICROBIOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now