Transcriptome Dynamics in Mango Fruit Peel Reveals Mechanisms of Chilling Stress

Increased anthocyanin and flavonoids in mango fruit peel are associated with cold and pathogen resistance

(2016) Velu Sivankalyani et al.   POSTHARVEST BIOLOGY AND TECHNOLOGY

Linking lenticel discolouration of mango (Mangifera indicaL.) fruit to reversed-phase HPLC profiles of phenolic compounds

(2016) G. W. Du Plooy et al.   JOURNAL OF HORTICULTURAL SCIENCE & BIOTECHNOLOGY

Mango (Mangifera indica L.) germplasm diversity based on single nucleotide polymorphisms derived from the transcriptome

(2015) Amir Sherman et al.   BMC PLANT BIOLOGY

Mango (Mangifera indica L.) cv. Kent fruit mesocarp de novo transcriptome assembly identifies gene families important for ripening

(2015) Mitzuko Dautt-Castro et al.   Frontiers in Plant Science

Insights into molecular and metabolic events associated with fruit response to post-harvest fungal pathogens

(2015) Noam Alkan et al.   Frontiers in Plant Science

FactoMineR: AnRPackage for Multivariate Analysis

(2015) Sébastien Lê et al.   Journal of Statistical Software

Combined Treatments Reduce Chilling Injury and Maintain Fruit Quality in Avocado Fruit during Cold Quarantine

(2015) Velu Sivankalyani et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

De-novo assembly of mango fruit peel transcriptome reveals mechanisms of mango response to hot water treatment

(2014) Neta Luria et al.   BMC GENOMICS

Transcriptome Analysis Reveals Crosstalk of Responsive Genes to Multiple Abiotic Stresses in Cotton (Gossypium hirsutum L.)

(2013) Ya-Na Zhu et al.   PLoS One

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Gene Ontology Annotations and Resources

(2012)   NUCLEIC ACIDS RESEARCH

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Hormone balance and abiotic stress tolerance in crop plants

(2011) Zvi Peleg et al.   CURRENT OPINION IN PLANT BIOLOGY

Expression analysis in response to low temperature stress in blood oranges: Implication of the flavonoid biosynthetic pathway

(2011) Tiziana Crifò et al.   GENE

Microarray Expression Profiling of Postharvest Ponkan Mandarin (Citrus reticulata) Fruit under Cold Storage Reveals Regulatory Gene Candidates and Implications on Soluble Sugars Metabolism

(2011) Andan Zhu et al.   Journal of Integrative Plant Biology

Homeostasis of plasma membrane viscosity in fluctuating temperatures

(2011) Alexandre Martinière et al.   NEW PHYTOLOGIST

Using spontaneous photon emission to image lipid oxidation patterns in plant tissues

(2011) Simona Birtic et al.   PLANT JOURNAL

The isolation of high quality RNA from the fruit of avocado (Persea americana Mill.)

(2011) A.T. Djami-Tchatchou et al.   SOUTH AFRICAN JOURNAL OF BOTANY

Maintaining mango (Mangifera indica L.) fruit quality during the export chain

(2010) Dharini Sivakumar et al.   FOOD RESEARCH INTERNATIONAL

Abiotic and Biotic Stresses and Changes in the Lignin Content and Composition in Plants

(2010) Jullyana Cristina Magalhães Silva Moura et al.   Journal of Integrative Plant Biology

Endoplasmic Reticulum Protein Quality Control and Its Relationship to Environmental Stress Responses in Plants

(2010) Jian-Xiang Liu et al.   PLANT CELL

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Methyl jasmonate reduces chilling injury and enhances antioxidant enzyme activity in postharvest loquat fruit

(2009) Shifeng Cao et al.   FOOD CHEMISTRY

Physiological, hormonal and molecular mechanisms regulating chilling injury in horticultural species. Postharvest technologies applied to reduce its impact

(2009) Laura Sevillano et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Phenylpropanoid Biosynthesis

(2009) Thomas Vogt   Molecular Plant

Evidence for a Role of Gibberellins in Salicylic Acid-Modulated Early Plant Responses to Abiotic Stress in Arabidopsis Seeds

(2009) A. Alonso-Ramirez et al.   PLANT PHYSIOLOGY

TRPA1 acts as a cold sensor in vitro and in vivo

(2009) Y. Karashima et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

InterPro: the integrative protein signature database

(2008) S. Hunter et al.   NUCLEIC ACIDS RESEARCH

Reactive oxygen signaling and abiotic stress

(2008) Gad Miller et al.   PHYSIOLOGIA PLANTARUM

A Comprehensive Transcriptional Profiling of the WRKY Gene Family in Rice Under Various Abiotic and Phytohormone Treatments

(2008) Rengasamy Ramamoorthy et al.   PLANT AND CELL PHYSIOLOGY

Chilling response of plants: importance of galactolipase, free fatty acids and free radicals

(2008) Z. Kaniuga   PLANT BIOLOGY

The Cold-Inducible CBF1 Factor-Dependent Signaling Pathway Modulates the Accumulation of the Growth-Repressing DELLA Proteins via Its Effect on Gibberellin Metabolism

(2008) P. Achard et al.   PLANT CELL

Gene expression in potato during cold exposure: Changes in carbohydrate and polyamine metabolisms

(2008) Mouhssin Oufir et al.   PLANT SCIENCE

Reduced chilling injury in mango fruit by 2,4-dichlorophenoxyacetic acid and the antioxidant response

(2008) Baogang Wang et al.   POSTHARVEST BIOLOGY AND TECHNOLOGY