Translational regulation in blood stages of the malaria parasite Plasmodium spp. : systems-wide studies pave the way

The regulation and functions of the nuclear RNA exosome complex

(2016) Cornelia Kilchert et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

UIS2: A Unique Phosphatase Required for the Development of Plasmodium Liver Stages

(2016) Min Zhang et al.   PLoS Pathogens

Translational Control of UIS4 Protein of the Host-Parasite Interface Is Mediated by the RNA Binding Protein Puf2 in Plasmodium berghei Sporozoites

(2016) Patrícia A. G. C. Silva et al.   PLoS One

A bioinformatic survey of RNA-binding proteins in Plasmodium

(2015) BP Niranjan Reddy et al.   BMC GENOMICS

Modifications on Translation Initiation

(2015) Sarah F. Mitchell et al.   CELL

Pausing on Polyribosomes: Make Way for Elongation in Translational Control

(2015) Joel D. Richter et al.   CELL

eIF4F: A Retrospective

(2015) William C. Merrick   JOURNAL OF BIOLOGICAL CHEMISTRY

Plasmodium vivax trophozoite-stage proteomes

(2015) D.C. Anderson et al.   Journal of Proteomics

Upstream AUGs and upstream ORFs can regulate the downstream ORF in Plasmodium falciparum

(2015) Mayank Kumar et al.   MALARIA JOURNAL

PfSR1 controls alternative splicing and steady-state RNA levels inPlasmodium falciparumthrough preferential recognition of specific RNA motifs

(2015) Shiri Eshar et al.   MOLECULAR MICROBIOLOGY

Targeting and function of proteins mediating translation initiation in organelles ofPlasmodium falciparum

(2015) Afreen Haider et al.   MOLECULAR MICROBIOLOGY

A novel multiple-stage antimalarial agent that inhibits protein synthesis

(2015) Beatriz Baragaña et al.   NATURE

Dynamic m6A mRNA methylation directs translational control of heat shock response

(2015) Jun Zhou et al.   NATURE

Single-nucleotide-resolution mapping of m6A and m6Am throughout the transcriptome

(2015) Bastian Linder et al.   NATURE METHODS

The interplay between nucleoid organization and transcription in archaeal genomes

(2015) Eveline Peeters et al.   NATURE REVIEWS MICROBIOLOGY

Post-translational protein modifications in malaria parasites

(2015) Christian Doerig et al.   NATURE REVIEWS MICROBIOLOGY

Multidimensional proteomics for cell biology

(2015) Mark Larance et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Ribosome profiling reveals the what, when, where and how of protein synthesis

(2015) Gloria A. Brar et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Regulation of Plasmodium yoelii Oocyst Development by Strain- and Stage-Specific Small-Subunit rRNA

(2015) Yanwei Qi et al.   mBio

Transfer RNAs Mediate the Rapid Adaptation of Escherichia coli to Oxidative Stress

(2015) Jiayong Zhong et al.   PLoS Genetics

Translational regulation during stage transitions in malaria parasites

(2014) Liwang Cui et al.   Annals of the New York Academy of Sciences

Strand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparum

(2014) T Siegel et al.   BMC GENOMICS

Epigenetic memory takes center stage in the survival strategy of malaria parasites

(2014) Till S Voss et al.   CURRENT OPINION IN MICROBIOLOGY

The eukaryotic RNA exosome

(2014) Kurt Januszyk et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Regulation of Natural mRNAs by the Nonsense-Mediated mRNA Decay Pathway

(2014) Megan Peccarelli et al.   EUKARYOTIC CELL

Molecular characterization of Plasmodium falciparum Bruno/CELF RNA binding proteins

(2014) Chayaphat Wongsombat et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Exonuclease-mediated degradation of nascent RNA silences genes linked to severe malaria

(2014) Qingfeng Zhang et al.   NATURE

Genome editing in the human malaria parasite Plasmodium falciparum using the CRISPR-Cas9 system

(2014) Mehdi Ghorbal et al.   NATURE BIOTECHNOLOGY

Emerging evidence for functional peptides encoded by short open reading frames

(2014) Shea J. Andrews et al.   NATURE REVIEWS GENETICS

Emerging roles of tRNA in adaptive translation, signalling dynamics and disease

(2014) Sebastian Kirchner et al.   NATURE REVIEWS GENETICS

The emergence of proteome-wide technologies: systematic analysis of proteins comes of age

(2014) Michal Breker et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The dynamic epitranscriptome: N6-methyladenosine and gene expression control

(2014) Kate D. Meyer et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

OsAlba1, a dehydration-responsive nuclear protein of rice (Oryza sativa L. ssp. indica), participates in stress adaptation

(2014) Jitendra Kumar Verma et al.   PHYTOCHEMISTRY

A var Gene Upstream Element Controls Protein Synthesis at the Level of Translation Initiation in Plasmodium falciparum

(2014) Nicolas M. B. Brancucci et al.   PLoS One

Analogs of natural aminoacyl-tRNA synthetase inhibitors clear malaria in vivo

(2014) Eva Maria Novoa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Population transcriptomics of human malaria parasites reveals the mechanism of artemisinin resistance

(2014) S. Mok et al.   SCIENCE

Reduced ribosomes of the apicoplast and mitochondrion of Plasmodium spp. and predicted interactions with antibiotics

(2014) A. Gupta et al.   Open Biology

A Genome-Wide Tethering Screen Reveals Novel Potential Post-Transcriptional Regulators in Trypanosoma brucei

(2014) Esteban D. Erben et al.   PLoS Pathogens

The regulatory potential of upstream open reading frames in eukaryotic gene expression

(2014) Klaus Wethmar   Wiley Interdisciplinary Reviews-RNA

The RNAissance family: SR proteins as multifaceted regulators of gene expression

(2014) Jonathan M. Howard et al.   Wiley Interdisciplinary Reviews-RNA

Genome-wide regulatory dynamics of translation in the Plasmodium falciparum asexual blood stages

(2014) Florence Caro et al.   eLife

Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine

(2014) Wilson Wong et al.   eLife

Borrelidin analogues with antimalarial activity: Design, synthesis and biological evaluation against Plasmodium falciparum parasites

(2013) Akihiro Sugawara et al.   BIOORGANIC & MEDICINAL CHEMISTRY LETTERS

Changes in the transcriptome of the malaria parasite Plasmodium falciparum during the initial phase of transmission from the human to the mosquito

(2013) Che Julius Ngwa et al.   BMC GENOMICS

Perturbations ofPlasmodium Puf2 expression and RNA-seq of Puf2-deficient sporozoites reveal a critical role in maintaining RNA homeostasis and parasite transmissibility

(2013) Scott E. Lindner et al.   CELLULAR MICROBIOLOGY

Selective Inhibition of an Apicoplastic Aminoacyl-tRNA Synthetase fromPlasmodium falciparum

(2013) Rob Hoen et al.   CHEMBIOCHEM

Plasmodium falciparum DOZI, an RNA helicase interacts with eIF4E

(2013) Mohammed Tarique et al.   GENE

Toxoplasma gondii Alba Proteins Are Involved in Translational Control of Gene Expression

(2013) Mathieu Gissot et al.   JOURNAL OF MOLECULAR BIOLOGY

An Alba-domain protein contributes to the stage-regulated stability of amastin transcripts inLeishmania

(2013) Aurélien Dupé et al.   MOLECULAR MICROBIOLOGY

Recycling factors for ribosome disassembly in the apicoplast and mitochondrion ofPlasmodium falciparum

(2013) Ankit Gupta et al.   MOLECULAR MICROBIOLOGY

A molecular switch in the efficiency of translation reinitiation controls expression ofvar2csa, a gene implicated in pregnancy-associated malaria

(2013) Cristina Bancells et al.   MOLECULAR MICROBIOLOGY

The intimate relationships of mRNA decay and translation

(2013) Bijoyita Roy et al.   TRENDS IN GENETICS

Puf Mediates Translation Repression of Transmission-Blocking Vaccine Candidates in Malaria Parasites

(2013) Jun Miao et al.   PLoS Pathogens

Translation regulation gets its ‘omics’ moment

(2013) Scott Kuersten et al.   Wiley Interdisciplinary Reviews-RNA

Polysome profiling reveals translational control of gene expression in the human malaria parasite Plasmodium falciparum

(2013) Evelien M Bunnik et al.   GENOME BIOLOGY

Translocation of Sickle Cell Erythrocyte MicroRNAs into Plasmodium falciparum Inhibits Parasite Translation and Contributes to Malaria Resistance

(2012) Gregory LaMonte et al.   Cell Host & Microbe

Selective and Specific Inhibition of the Plasmodium falciparum Lysyl-tRNA Synthetase by the Fungal Secondary Metabolite Cladosporin

(2012) Dominic Hoepfner et al.   Cell Host & Microbe

Translational Control in Plasmodium and Toxoplasma Parasites

(2012) Min Zhang et al.   EUKARYOTIC CELL

Insights into the regulation of protein abundance from proteomic and transcriptomic analyses

(2012) Christine Vogel et al.   NATURE REVIEWS GENETICS

A novel Plasmodium falciparum SR protein is an alternative splicing factor required for the parasites’ proliferation in human erythrocytes

(2012) Shiri Eshar et al.   NUCLEIC ACIDS RESEARCH

The Fragmented Mitochondrial Ribosomal RNAs of Plasmodium falciparum

(2012) Jean E. Feagin et al.   PLoS One

PK4, a eukaryotic initiation factor 2 (eIF2 ) kinase, is essential for the development of the erythrocytic cycle of Plasmodium

(2012) M. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arrest of Nuclear Division in Plasmodium through Blockage of Erythrocyte Surface Exposed Ribosomal Protein P2

(2012) Sudipta Das et al.   PLoS Pathogens

The Phosphoproteomes of Plasmodium falciparum and Toxoplasma gondii Reveal Unusual Adaptations Within and Beyond the Parasites' Boundaries

(2011) Moritz Treeck et al.   Cell Host & Microbe

CCR4-Associated Factor 1 Coordinates the Expression of Plasmodium falciparum Egress and Invasion Proteins

(2011) Bharath Balu et al.   EUKARYOTIC CELL

Dual targeting of aminoacyl-tRNA synthetases to the apicoplast and cytosol in Plasmodium falciparum

(2011) Katherine E. Jackson et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Determination of the Plasmodium vivax schizont stage proteome

(2011) Wanlapa Roobsoong et al.   Journal of Proteomics

Quantitative Time-course Profiling of Parasite and Host Cell Proteins in the Human Malaria ParasitePlasmodium falciparum

(2011) Bernardo Javier Foth et al.   MOLECULAR & CELLULAR PROTEOMICS

Identification and molecular characterization of an Alba-family protein from human malaria parasite Plasmodium falciparum

(2011) Manish Goyal et al.   NUCLEIC ACIDS RESEARCH

PfAlbas constitute a new eukaryotic DNA/RNA-binding protein family in malaria parasites

(2011) Arnaud Chêne et al.   NUCLEIC ACIDS RESEARCH

RNA-Seq analysis of splicing in Plasmodium falciparum uncovers new splice junctions, alternative splicing and splicing of antisense transcripts

(2011) K. Sorber et al.   NUCLEIC ACIDS RESEARCH

The Puf-Family RNA-Binding Protein Puf2 Controls Sporozoite Conversion to Liver Stages in the Malaria Parasite

(2011) Katja Müller et al.   PLoS One

Alba-Domain Proteins of Trypanosoma brucei Are Cytoplasmic RNA-Binding Proteins That Interact with the Translation Machinery

(2011) Jan Mani et al.   PLoS One

Validation of isoleucine utilization targets in Plasmodium falciparum

(2011) E. S. Istvan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Protein translation in Plasmodium parasites

(2011) Katherine E. Jackson et al.   TRENDS IN PARASITOLOGY

Global kinomic and phospho-proteomic analyses of the human malaria parasite Plasmodium falciparum

(2011) Lev Solyakov et al.   Nature Communications

Transition of Plasmodium Sporozoites into Liver Stage-Like Forms Is Regulated by the RNA Binding Protein Pumilio

(2011) Carina S. S. Gomes-Santos et al.   PLoS Pathogens

Malaria,Plasmodium falciparumand its apicoplast

(2010) Ming Kalanon et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Antibiotics in Malaria Therapy and their Effect on the Parasite Apicoplast

(2010) G. Pradel et al.   CURRENT MOLECULAR MEDICINE

Interaction of apicoplast-encoded elongation factor (EF) EF-Tu with nuclear-encoded EF-Ts mediates translation in the Plasmodium falciparum plastid

(2010) Subir Biswas et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

The Puf-family RNA-binding protein PfPuf2 regulates sexual development and sex differentiation in the malaria parasite Plasmodium falciparum

(2010) J. Miao et al.   JOURNAL OF CELL SCIENCE

ThePlasmodiumeukaryotic initiation factor-2α kinase IK2 controls the latency of sporozoites in the mosquito salivary glands

(2010) Min Zhang et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Plasmodium falciparum proteome changes in response to doxycycline treatment

(2010) Sébastien Briolant et al.   MALARIA JOURNAL

Plasmodium chabaudi chabaudi malaria parasites can develop stable resistance to atovaquone with a mutation in the cytochrome b gene

(2010) Ana Afonso et al.   MALARIA JOURNAL

The Apicomplexan AP2 family: Integral factors regulating Plasmodium development

(2010) Heather J. Painter et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

New insights into the blood-stage transcriptome ofPlasmodium falciparumusing RNA-Seq

(2010) Thomas D. Otto et al.   MOLECULAR MICROBIOLOGY

SAP1 is a critical post-transcriptional regulator of infectivity in malaria parasite sporozoite stages

(2010) Ahmed S. I. Aly et al.   MOLECULAR MICROBIOLOGY

A Systems-Based Analysis of Plasmodium vivax Lifecycle Transcription from Human to Mosquito

(2010) Scott J. Westenberger et al.   PLoS Neglected Tropical Diseases

Universal Features of Post-Transcriptional Gene Regulation Are Critical for Plasmodium Zygote Development

(2010) Gunnar R. Mair et al.   PLoS Pathogens

From cradle to grave: RNA biology in malaria parasites

(2010) Katie R. Hughes et al.   Wiley Interdisciplinary Reviews-RNA

Roles of Puf proteins in mRNA degradation and translation

(2010) Melanie A. Miller et al.   Wiley Interdisciplinary Reviews-RNA

The plasmodium receptor for activated C kinase protein inhibits Ca 2+ signaling in mammalian cells

(2009) Robson Sartorello et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Translational control of eukaryotic gene expression

(2009) Katrien Van Der Kelen et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

Low Complexity Regions behave as tRNA sponges to help co-translational folding of plasmodial proteins

(2009) Magali Frugier et al.   FEBS LETTERS

PfeIK1, a eukaryotic initiation factor 2α kinase of the human malaria parasite Plasmodium falciparum, regulates stress-response to amino-acid starvation

(2009) Clare Fennell et al.   MALARIA JOURNAL

How Common Are Extraribosomal Functions of Ribosomal Proteins?

(2009) Jonathan R. Warner et al.   MOLECULAR CELL

A global view of the nonprotein-coding transcriptome in Plasmodium falciparum

(2009) Carsten A. Raabe et al.   NUCLEIC ACIDS RESEARCH

Molecular genetics and comparative genomics reveal RNAi is not functional in malaria parasites

(2009) Jake Baum et al.   NUCLEIC ACIDS RESEARCH

Isolation and functional characterization of eIF4F components and poly(A)-binding protein from Plasmodium falciparum

(2009) Renu Tuteja et al.   PARASITOLOGY INTERNATIONAL

A glimpse into the clinical proteome of human malaria parasitesPlasmodium falciparumandPlasmodium vivax

(2009) Pragyan Acharya et al.   Proteomics Clinical Applications

An Upstream Open Reading Frame Controls Translation of var2csa, a Gene Implicated in Placental Malaria

(2009) Borko Amulic et al.   PLoS Pathogens

Default Pathway of var2csa Switching and Translational Repression in Plasmodium falciparum

(2008) Bobo W. Mok et al.   PLoS One

The transcriptome of Plasmodium vivax reveals divergence and diversity of transcriptional regulation in malaria parasites

(2008) Z. Bozdech et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A combined transcriptome and proteome survey of malaria parasite liver stages

(2008) A. S. Tarun et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chromatin associated sense and antisense noncoding RNAs are transcribed from the var gene family of virulence genes of the malaria parasite Plasmodium falciparum

(2008) C. Epp et al.   RNA

Apicoplast translation, transcription and genome replication: targets for antimalarial antibiotics

(2008) Erica L. Dahl et al.   TRENDS IN PARASITOLOGY

Proteomic Profiling of Plasmodium Sporozoite Maturation Identifies New Proteins Essential for Parasite Development and Infectivity

(2008) Edwin Lasonder et al.   PLoS Pathogens

Quantitative protein expression profiling reveals extensive post-transcriptional regulation and post-translational modifications in schizont-stage malaria parasites

(2008) Bernardo J Foth et al.   GENOME BIOLOGY

The validity of mitochondrial dehydrogenases as antimalarial drug targets

(2007) Akhil B. Vaidya et al.   TRENDS IN PARASITOLOGY