Added value of metabarcoding combined with microscopy for evolutionary studies of mammals

Owl pellets: a wise DNA source for small mammal genetics

(2015) S. Guimaraes et al.   JOURNAL OF ZOOLOGY

Host and parasite life history interplay to yield divergent population genetic structures in two ectoparasites living on the same bat species

(2015) J. van Schaik et al.   MOLECULAR ECOLOGY

DNA barcodes from century-old type specimens using next-generation sequencing

(2015) Sean W. J. Prosser et al.   Molecular Ecology Resources

DNA metabarcoding illuminates dietary niche partitioning by African large herbivores

(2015) Tyler R. Kartzinel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Abrupt warming events drove Late Pleistocene Holarctic megafaunal turnover

(2015) A. Cooper et al.   SCIENCE

DNA barcodes for ecology, evolution, and conservation

(2015) W. John Kress et al.   TRENDS IN ECOLOGY & EVOLUTION

Metabarcoding Is Powerful yet Still Blind: A Comparative Analysis of Morphological and Molecular Surveys of Seagrass Communities

(2015) Dominique A. Cowart et al.   PLoS One

Highly Overlapping Winter Diet in Two Sympatric Lemming Species Revealed by DNA Metabarcoding

(2015) Eeva M. Soininen et al.   PLoS One

Using DNA Barcodes to Identify Road-Killed Animals in Two Atlantic Forest Nature Reserves, Brazil

(2015) Angélica H. Klippel et al.   PLoS One

DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match

(2014) B. E. Deagle et al.   Biology Letters

Human impact and climate cooling caused range contraction of large mammals in China over the past two millennia

(2014) Xinhai Li et al.   ECOGRAPHY

Molecular detection of trophic interactions: emerging trends, distinct advantages, significant considerations and conservation applications

(2014) Elizabeth L. Clare   Evolutionary Applications

Phylogenomics of the killer whale indicates ecotype divergence in sympatry

(2014) A E Moura et al.   HEREDITY

Species cross-amplification, identification and genetic variation of 17 species of deer (Cervidae) with microsatellite and mitochondrial DNA from antlers

(2014) G. Sebastian Hoffmann et al.   MOLECULAR BIOLOGY REPORTS

Universal and blocking primer mismatches limit the use of high-throughput DNA sequencing for the quantitative metabarcoding of arthropods

(2014) J. Piñol et al.   Molecular Ecology Resources

Replication levels, false presences and the estimation of the presence/absence from eDNA metabarcoding data

(2014) Gentile F. Ficetola et al.   Molecular Ecology Resources

Comparing the effectiveness of metagenomics and metabarcoding for diet analysis of a leaf-feeding monkey (Pygathrix nemaeus)

(2014) Amrita Srivathsan et al.   Molecular Ecology Resources

Fifty thousand years of Arctic vegetation and megafaunal diet

(2014) Eske Willerslev et al.   NATURE

The role of tusks, musth and body size in male–male competition among Asian elephants, Elephas maximus

(2013) Karpagam Chelliah et al.   ANIMAL BEHAVIOUR

An integrative approach to detect subtle trophic niche differentiation in the sympatric trawling bat speciesMyotis dasycnemeandMyotis daubentonii

(2013) F. Krüger et al.   MOLECULAR ECOLOGY

Ecology in the age of DNA barcoding: the resource, the promise and the challenges ahead

(2013) Simon Joly et al.   Molecular Ecology Resources

Quantifying sequence proportions in a DNA-based diet study using Ion Torrent amplicon sequencing: which counts count?

(2013) Bruce E. Deagle et al.   Molecular Ecology Resources

A pragmatic approach to the analysis of diets of generalist predators: the use of next-generation sequencing with no blocking probes

(2013) J. Piñol et al.   Molecular Ecology Resources

Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

(2013) Ludovic Orlando et al.   NATURE

Parasite co-structure: broad and local scale approaches

(2013) C.D. Criscione   Parasite

The last of its kind? Radiocarbon, ancient DNA and stable isotope evidence from a late cave bear (Ursus spelaeus ROSENMÜLLER, 1794) from Rochedane (France)

(2013) Hervé Bocherens et al.   QUATERNARY INTERNATIONAL

Analysis of coprolites from the extinct mountain goat Myotragus balearicus

(2013) Frido Welker et al.   QUATERNARY RESEARCH

Taxonomic revision of the olingos (Bassaricyon), with description of a new species, the Olinguito

(2013) Kristofer M. Helgen et al.   ZooKeys

Testing mitochondrial markers for noninvasive genetic species identification in European mammals

(2013) Carsten Nowak et al.   Conservation Genetics Resources

DNA barcoding of Oryx leucoryx using the mitochondrial cytochrome C oxidase gene

(2012) K. Elmeer et al.   GENETICS AND MOLECULAR RESEARCH

Carnivore diet analysis based on next-generation sequencing: application to the leopard cat (Prionailurus bengalensis) in Pakistan

(2012) WASIM SHEHZAD et al.   MOLECULAR ECOLOGY

An emergent science on the brink of irrelevance: a review of the past 8 years of DNA barcoding

(2012) H. R. TAYLOR et al.   Molecular Ecology Resources

Next-Generation Sequencing for Rodent Barcoding: Species Identification from Fresh, Degraded and Environmental Samples

(2012) Maxime Galan et al.   PLoS One

Hybridization Hotspots at Bat Swarming Sites

(2012) Wiesław Bogdanowicz et al.   PLoS One

Rock hyrax middens: A palaeoenvironmental archive for southern African drylands

(2012) Brian M. Chase et al.   QUATERNARY SCIENCE REVIEWS

Systematic exploration of error sources in pyrosequencing flowgram data

(2011) S. Balzer et al.   BIOINFORMATICS

Quantifying spatial and temporal Holocene carbon accumulation in ombrotrophic peatlands of the Eastmain region, Quebec, Canada

(2011) Simon van Bellen et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Who is eating what: diet assessment using next generation sequencing

(2011) FRANCOIS POMPANON et al.   MOLECULAR ECOLOGY

DNA barcoding meets molecular scatology: short mtDNA sequences for standardized species assignment of carnivore noninvasive samples

(2011) PAULO B. CHAVES et al.   Molecular Ecology Resources

Reappraisal of the “Molecular phylogeny of Western Palaearctic Helicidae s.l. (Gastropoda: Stylommatophora)”: When poor science meets GenBank

(2011) Dick S.J. Groenenberg et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Faunal histories from Holocene ancient DNA

(2011) Mark de Bruyn et al.   TRENDS IN ECOLOGY & EVOLUTION

Mites as biological tags of their hosts

(2010) NADIA BRUYNDONCKX et al.   MOLECULAR ECOLOGY

The Role of DNA Barcodes in Understanding and Conservation of Mammal Diversity in Southeast Asia

(2010) Charles M. Francis et al.   PLoS One

Natural hybridization generates mammalian lineage with species characteristics

(2010) P. A. Larsen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Advancement to hair-sampling surveys of a medium-sized mammal: DNA-based individual identification and population estimation of a rare Australian marsupial, the spotted-tailed quoll (Dasyurus maculatus)

(2010) Monica Ruibal et al.   WILDLIFE RESEARCH

The effectiveness of hair traps for surveying mammals: results of a study in sandstone caves in the Tasmanian southern midlands

(2010) Rachel L. Harris et al.   AUSTRALIAN MAMMALOGY

The Straits of Gibraltar: barrier or bridge to Ibero-Moroccan bat diversity?

(2009) JUAN L. GARCÍA-MUDARRA et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Invasive species, ecosystem services and human well-being

(2009) Liba Pejchar et al.   TRENDS IN ECOLOGY & EVOLUTION

Carnivore population trends in Spanish agrosystems after the reduction in food availability due to rabbit decline by rabbit haemorrhagic disease and improved waste management

(2008) Raquel Sobrino et al.   EUROPEAN JOURNAL OF WILDLIFE RESEARCH

The Ecological implications of a Yakutian mammoth's last meal

(2008) Bas van Geel et al.   QUATERNARY RESEARCH

DNA barcoding for ecologists

(2008) Alice Valentini et al.   TRENDS IN ECOLOGY & EVOLUTION