Next-Generation Sequencing for Rodent Barcoding: Species Identification from Fresh, Degraded and Environmental Samples

Use of DNA Barcodes to Identify Invasive ArmywormSpodopteraSpecies in Florida

(2012) Rodney N. Nagoshi et al.   JOURNAL OF INSECT SCIENCE

Numts help to reconstruct the demographic history of the ocellated lizard (Lacerta lepida) in a secondary contact zone

(2012) ANDREIA MIRALDO et al.   MOLECULAR ECOLOGY

Carnivore diet analysis based on next-generation sequencing: application to the leopard cat (Prionailurus bengalensis) in Pakistan

(2012) WASIM SHEHZAD et al.   MOLECULAR ECOLOGY

|SE|S|AM|E| Barcode: NGS-oriented software for amplicon characterization - application to species and environmental barcoding

(2012) S. PIRY et al.   Molecular Ecology Resources

Paleogenetic Analyses Reveal Unsuspected Phylogenetic Affinities between Mice and the Extinct Malpaisomys insularis, an Endemic Rodent of the Canaries

(2012) Marie Pagès et al.   PLoS One

Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing

(2011) André Gilles et al.   BMC GENOMICS

Evidence of complex phylogeographic structure for the threatened rodent Leopoldamys neilli, in Southeast Asia

(2011) Alice Latinne et al.   CONSERVATION GENETICS

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Noninvasive molecular methods to identify live scarab larvae: an example of sympatric pest and nonpest species in New Zealand

(2011) M.-C. LEFORT et al.   Molecular Ecology Resources

Environmental Barcoding: A Next-Generation Sequencing Approach for Biomonitoring Applications Using River Benthos

(2011) Mehrdad Hajibabaei et al.   PLoS One

Molecular Diet Analysis of Two African Free-Tailed Bats (Molossidae) Using High Throughput Sequencing

(2011) Kristine Bohmann et al.   PLoS One

Multiple Geographic Origins of Commensalism and Complex Dispersal History of Black Rats

(2011) Ken P. Aplin et al.   PLoS One

Recent and Rapid Speciation with Limited Morphological Disparity in the Genus Rattus

(2011) Kevin C. Rowe et al.   SYSTEMATIC BIOLOGY

Still not enough taxonomists: reply to Joppa et al.

(2011) Sven Bacher   TRENDS IN ECOLOGY & EVOLUTION

Evolutionary systematics and biogeography of endemic gerbils (Rodentia, Muridae) from Morocco: an integrative approach

(2011) Arame Ndiaye et al.   ZOOLOGICA SCRIPTA

SESAME (SEquence Sorter & AMplicon Explorer): genotyping based on high-throughput multiplex amplicon sequencing

(2010) Emese Meglécz et al.   BIOINFORMATICS

Are there two cryptic species of the lesser jerboa Jaculus jaculus (Rodentia: Dipodidae) in Tunisia? Evidence from molecular, morphometric, and cytogenetic data

(2010) ABDERRAOUF BEN FALEH et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

DNA barcodes reveal species-specific mercury levels in tuna sushi that pose a health risk to consumers

(2010) J. H. Lowenstein et al.   Biology Letters

Revisiting the taxonomy of the Rattini tribe: a phylogeny-based delimitation of species boundaries

(2010) Marie Pagès et al.   BMC EVOLUTIONARY BIOLOGY

A 454 multiplex sequencing method for rapid and reliable genotyping of highly polymorphic genes in large-scale studies

(2010) Maxime Galan et al.   BMC GENOMICS

After 7 years and 1000 citations: Comparative assessment of the DNA barcoding and the DNA taxonomy proposals for taxonomists and non-taxonomists

(2010) Fabrice Teletchea   Mitochondrial DNA

Identifying coral reef fish larvae through DNA barcoding: A test case with the families Acanthuridae and Holocentridae

(2010) Nicolas Hubert et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogeography of spiny mice (genus Acomys, Rodentia: Muridae) from the south-western margin of the Sahara with taxonomic implications

(2009) VIOLAINE NICOLAS et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Rodent-borne diseases and their risks for public health

(2009) Bastiaan G Meerburg et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Demography and Phylogenetic Utility of Numt Pseudogenes in the Southern Red-Backed Vole (Myodes gapperi)

(2009) Deborah A. Triant et al.   JOURNAL OF MAMMALOGY

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

Impacts of climatic changes on small mammal communities in the Sahel (West Africa) as evidenced by owl pellet analysis

(2008) Massamba Thiam et al.   AFRICAN ZOOLOGY

Phylogeny and biogeography of African Murinae based on mitochondrial and nuclear gene sequences, with a new tribal classification of the subfamily

(2008) Emilie Lecompte et al.   BMC EVOLUTIONARY BIOLOGY

A universal DNA mini-barcode for biodiversity analysis

(2008) Isabelle Meusnier et al.   BMC GENOMICS

Molecular identification of vertebrate species by oligonucleotide microarray in food and forensic samples

(2008) Fabrice Teletchea et al.   JOURNAL OF APPLIED ECOLOGY

An update on the taxonomy and geographic distribution of the cryptic speciesMastomys kollmannspergeri(Muridae, Murinae) using combined cytogenetic and molecular data

(2008) G. Dobigny et al.   JOURNAL OF ZOOLOGY

Dating of divergences within the Rattus genus phylogeny using whole mitochondrial genomes

(2008) Judith H. Robins et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Pliocene colonization and adaptive radiations in Australia and New Guinea (Sahul): Multilocus systematics of the old endemic rodents (Muroidea: Murinae)

(2008) Kevin C. Rowe et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

False phylogenies on wood mice due to cryptic cytochrome-b pseudogene

(2008) Sylvain Dubey et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY