Identification of candidate domestication regions in the radish genome based on high-depth resequencing analysis of 17 genotypes
出版年份 2016 全文链接
标题
Identification of candidate domestication regions in the radish genome based on high-depth resequencing analysis of 17 genotypes
作者
关键词
Genetic Bottleneck, Wild Genotype, Linkage Disequilibrium Decay, Lateral Root Development, Wild Radish
出版物
THEORETICAL AND APPLIED GENETICS
Volume 129, Issue 9, Pages 1797-1814
出版商
Springer Nature
发表日期
2016-07-05
DOI
10.1007/s00122-016-2741-z
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing
- (2016) João Vitor Maldonado dos Santos et al. BMC GENOMICS
- Elucidating the triplicated ancestral genome structure of radish based on chromosome-level comparison with the Brassica genomes
- (2016) Young-Min Jeong et al. THEORETICAL AND APPLIED GENETICS
- Cytokinin-dependent secondary growth determines root biomass in radish (Raphanus sativusL.)
- (2015) Geupil Jang et al. JOURNAL OF EXPERIMENTAL BOTANY
- Improving crop nutrient efficiency through root architecture modifications
- (2015) Xinxin Li et al. Journal of Integrative Plant Biology
- Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean
- (2015) Zhengkui Zhou et al. NATURE BIOTECHNOLOGY
- Genome scans reveal candidate domestication and improvement genes in cultivated sunflower, as well as post-domestication introgression with wild relatives
- (2015) Gregory J. Baute et al. NEW PHYTOLOGIST
- The radish genome and comprehensive gene expression profile of tuberous root formation and development
- (2015) Yuki Mitsui et al. Scientific Reports
- New insights into domestication of carrot from root transcriptome analyses
- (2014) Jun Rong et al. BMC GENOMICS
- Draft Sequences of the Radish (Raphanus sativus L.) Genome
- (2014) Hiroyasu Kitashiba et al. DNA RESEARCH
- Consequences of Whole-Genome Triplication as Revealed by Comparative Genomic Analyses of the Wild Radish Raphanus raphanistrum and Three Other Brassicaceae Species
- (2014) G. D. Moghe et al. PLANT CELL
- Functional Characterization of the Rice UDP-glucose 4-epimerase 1, OsUGE1: A Potential Role in Cell Wall Carbohydrate Partitioning during Limiting Nitrogen Conditions
- (2014) David R. Guevara et al. PLoS One
- Construction of a reference genetic map of Raphanus sativus based on genotyping by whole-genome resequencing
- (2014) Jeong-Hwan Mun et al. THEORETICAL AND APPLIED GENETICS
- Plant domestication versus crop evolution: a conceptual framework for cereals and grain legumes
- (2014) Shahal Abbo et al. TRENDS IN PLANT SCIENCE
- Genetic structure and domestication of carrot (Daucus carota subsp. sativus) (Apiaceae)
- (2013) M. Iorizzo et al. AMERICAN JOURNAL OF BOTANY
- A Bountiful Harvest: Genomic Insights into Crop Domestication Phenotypes
- (2013) Kenneth M. Olsen et al. Annual Review of Plant Biology
- Transcriptional profiling of sweetpotato (Ipomoea batatas) roots indicates down-regulation of lignin biosynthesis and up-regulation of starch biosynthesis at an early stage of storage root formation
- (2013) Nurit Firon et al. BMC GENOMICS
- Population Structure and Domestication Revealed by High-Depth Resequencing of Korean Cultivated and Wild Soybean Genomes
- (2013) W.-H. Chung et al. DNA RESEARCH
- MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
- (2013) Koichiro Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- The nitrate transporter NRT2.1 functions in the ethylene response to nitrate deficiency inArabidopsis
- (2013) DONGCHAO ZHENG et al. PLANT CELL AND ENVIRONMENT
- Resequencing rice genomes: an emerging new era of rice genomics
- (2013) Xuehui Huang et al. TRENDS IN GENETICS
- Overexpression of PeRHD3 alters the root architecture in Populus
- (2012) Meng Xu et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- High-throughput polymorphism detection and genotyping in Brassica napus using next-generation RAD sequencing
- (2012) Anja Bus et al. BMC GENOMICS
- A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff
- (2012) Pablo Cingolani et al. FLY
- Comparative population genomics of maize domestication and improvement
- (2012) Matthew B Hufford et al. NATURE GENETICS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data
- (2012) Ravi K. Patel et al. PLoS One
- A Gene Regulatory Network for Root Epidermis Cell Differentiation in Arabidopsis
- (2012) Angela Bruex et al. PLoS Genetics
- Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes
- (2011) Xun Xu et al. NATURE BIOTECHNOLOGY
- Parallel Adaptation: One or Many Waves of Advance of an Advantageous Allele?
- (2010) P. Ralph et al. GENETICS
- Population differentiation as a test for selective sweeps
- (2010) H. Chen et al. GENOME RESEARCH
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- Differential expression analysis for sequence count data
- (2010) Simon Anders et al. GENOME BIOLOGY
- Multiple origins and high genetic diversity of cultivated radish inferred from polymorphism in chloroplast simple sequence repeats
- (2009) Kyoko Yamane et al. BREEDING SCIENCE
- Genome-wide discovery of DNA polymorphism in Brassica rapa
- (2009) Soomin Park et al. MOLECULAR GENETICS AND GENOMICS
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