标题
Metagenome-wide association studies: fine-mining the microbiome
作者
关键词
-
出版物
NATURE REVIEWS MICROBIOLOGY
Volume 14, Issue 8, Pages 508-522
出版商
Springer Nature
发表日期
2016-07-13
DOI
10.1038/nrmicro.2016.83
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- The microbial pharmacists within us: a metagenomic view of xenobiotic metabolism
- (2016) Peter Spanogiannopoulos et al. NATURE REVIEWS MICROBIOLOGY
- Extensive Strain-Level Copy-Number Variation across Human Gut Microbiome Species
- (2015) Sharon Greenblum et al. CELL
- Disease-Specific Alterations in the Enteric Virome in Inflammatory Bowel Disease
- (2015) Jason M. Norman et al. CELL
- Personalized Nutrition by Prediction of Glycemic Responses
- (2015) David Zeevi et al. CELL
- Non-lethal Inhibition of Gut Microbial Trimethylamine Production for the Treatment of Atherosclerosis
- (2015) Zeneng Wang et al. CELL
- Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life
- (2015) Fredrik Bäckhed et al. Cell Host & Microbe
- A Smartphone App Reveals Erratic Diurnal Eating Patterns in Humans that Can Be Modulated for Health Benefits
- (2015) Shubhroz Gill et al. Cell Metabolism
- Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome
- (2015) Saeed Shoaie et al. Cell Metabolism
- Dietary Fiber-Induced Improvement in Glucose Metabolism Is Associated with Increased Abundance of Prevotella
- (2015) Petia Kovatcheva-Datchary et al. Cell Metabolism
- The Gut Microbiome Contributes to a Substantial Proportion of the Variation in Blood LipidsNovelty and Significance
- (2015) Jingyuan Fu et al. CIRCULATION RESEARCH
- The gut microbiota and host health: a new clinical frontier
- (2015) Julian R Marchesi et al. GUT
- Binding of the Fap2 Protein of Fusobacterium nucleatum to Human Inhibitory Receptor TIGIT Protects Tumors from Immune Cell Attack
- (2015) Chamutal Gur et al. IMMUNITY
- Pancreatic β-Cells Limit Autoimmune Diabetes via an Immunoregulatory Antimicrobial Peptide Expressed under the Influence of the Gut Microbiota
- (2015) Jia Sun et al. IMMUNITY
- Hydrogen Sulfide Protects from Colitis and Restores Intestinal Microbiota Biofilm and Mucus Production
- (2015) Jean-Paul Motta et al. INFLAMMATORY BOWEL DISEASES
- Cloning and variation of ground state intestinal stem cells
- (2015) Xia Wang et al. NATURE
- Human gut Bacteroidetes can utilize yeast mannan through a selfish mechanism
- (2015) Fiona Cuskin et al. NATURE
- A new antibiotic kills pathogens without detectable resistance
- (2015) Losee L. Ling et al. NATURE
- Disentangling type 2 diabetes and metformin treatment signatures in the human gut microbiota
- (2015) Kristoffer Forslund et al. NATURE
- A catalog of the mouse gut metagenome
- (2015) Liang Xiao et al. NATURE BIOTECHNOLOGY
- Synthetic long-read sequencing reveals intraspecies diversity in the human microbiome
- (2015) Volodymyr Kuleshov et al. NATURE BIOTECHNOLOGY
- The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment
- (2015) Xuan Zhang et al. NATURE MEDICINE
- Host microbiota constantly control maturation and function of microglia in the CNS
- (2015) Daniel Erny et al. NATURE NEUROSCIENCE
- Sequencing and beyond: integrating molecular 'omics' for microbial community profiling
- (2015) Eric A. Franzosa et al. NATURE REVIEWS MICROBIOLOGY
- Accurate read-based metagenome characterization using a hierarchical suite of unique signatures
- (2015) Tracey Allen K. Freitas et al. NUCLEIC ACIDS RESEARCH
- Commensal Bifidobacterium promotes antitumor immunity and facilitates anti-PD-L1 efficacy
- (2015) A. Sivan et al. SCIENCE
- Rethinking heritability of the microbiome
- (2015) Edward J. van Opstal et al. SCIENCE
- Anticancer immunotherapy by CTLA-4 blockade relies on the gut microbiota
- (2015) M. Vetizou et al. SCIENCE
- Gut microbiome development along the colorectal adenoma–carcinoma sequence
- (2015) Qiang Feng et al. Nature Communications
- Gut mucosal microbiome across stages of colorectal carcinogenesis
- (2015) Geicho Nakatsu et al. Nature Communications
- Effect of Metformin on Metabolic Improvement and Gut Microbiota
- (2014) Heetae Lee et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Human Genetics Shape the Gut Microbiome
- (2014) Julia K. Goodrich et al. CELL
- Determining Microbial Products and Identifying Molecular Targets in the Human Microbiome
- (2014) Regina Joice et al. Cell Metabolism
- Cancer incidence and mortality worldwide: Sources, methods and major patterns in GLOBOCAN 2012
- (2014) Jacques Ferlay et al. INTERNATIONAL JOURNAL OF CANCER
- Structural modulation of gut microbiota during alleviation of type 2 diabetes with a Chinese herbal formula
- (2014) Jia Xu et al. ISME Journal
- Potential of fecal microbiota for early-stage detection of colorectal cancer
- (2014) G. Zeller et al. Molecular Systems Biology
- Dietary modulation of the microbiome affects autoinflammatory disease
- (2014) John R. Lukens et al. NATURE
- Biogeography and individuality shape function in the human skin metagenome
- (2014) Julia Oh et al. NATURE
- Rapid fucosylation of intestinal epithelium sustains host–commensal symbiosis in sickness
- (2014) Joseph M. Pickard et al. NATURE
- Dynamics and associations of microbial community types across the human body
- (2014) Tao Ding et al. NATURE
- An integrated catalog of reference genes in the human gut microbiome
- (2014) Junhua Li et al. NATURE BIOTECHNOLOGY
- Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
- (2014) H Bjørn Nielsen et al. NATURE BIOTECHNOLOGY
- Microbial glycan microarrays define key features of host-microbial interactions
- (2014) Sean R Stowell et al. Nature Chemical Biology
- The gut microbiota, bacterial metabolites and colorectal cancer
- (2014) Petra Louis et al. NATURE REVIEWS MICROBIOLOGY
- Pathogenesis and prevention of rheumatic disease: focus on preclinical RA and SLE
- (2014) Kevin D. Deane et al. Nature Reviews Rheumatology
- Innate lymphoid cells regulate intestinal epithelial cell glycosylation
- (2014) Y. Goto et al. SCIENCE
- The Placenta Harbors a Unique Microbiome
- (2014) K. Aagaard et al. Science Translational Medicine
- The gut microbiota influences blood-brain barrier permeability in mice
- (2014) V. Braniste et al. Science Translational Medicine
- Differential Modulation by Akkermansia muciniphila and Faecalibacterium prausnitzii of Host Peripheral Lipid Metabolism and Histone Acetylation in Mouse Gut Organoids
- (2014) S. Lukovac et al. mBio
- Prediction and quantification of bioactive microbiota metabolites in the mouse gut
- (2014) Gautham V. Sridharan et al. Nature Communications
- Homeostasis in Intestinal Epithelium Is Orchestrated by the Circadian Clock and Microbiota Cues Transduced by TLRs
- (2013) Atish Mukherji et al. CELL
- Microbiota Modulate Behavioral and Physiological Abnormalities Associated with Neurodevelopmental Disorders
- (2013) Elaine Y. Hsiao et al. CELL
- Fusobacterium nucleatum Potentiates Intestinal Tumorigenesis and Modulates the Tumor-Immune Microenvironment
- (2013) Aleksandar D. Kostic et al. Cell Host & Microbe
- When and where does inflammation begin in rheumatoid arthritis?
- (2013) M. Kristen Demoruelle et al. CURRENT OPINION IN RHEUMATOLOGY
- Worms need microbes too: microbiota, health and aging inCaenorhabditis elegans
- (2013) Filipe Cabreiro et al. EMBO Molecular Medicine
- An increase in theAkkermansiaspp. population induced by metformin treatment improves glucose homeostasis in diet-induced obese mice
- (2013) Na-Ri Shin et al. GUT
- Prevalence and Control of Diabetes in Chinese Adults
- (2013) Yu Xu JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- Colorectal cancer
- (2013) Hermann Brenner et al. LANCET
- Insights into the phylogeny and coding potential of microbial dark matter
- (2013) Christian Rinke et al. NATURE
- Richness of human gut microbiome correlates with metabolic markers
- (2013) Emmanuelle Le Chatelier et al. NATURE
- Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome
- (2013) Sheetal R. Modi et al. NATURE
- Bacterial colonization factors control specificity and stability of the gut microbiota
- (2013) S. Melanie Lee et al. NATURE
- Dietary intervention impact on gut microbial gene richness
- (2013) Aurélie Cotillard et al. NATURE
- Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota
- (2013) Koji Atarashi et al. NATURE
- Gut metagenome in European women with normal, impaired and diabetic glucose control
- (2013) Fredrik H. Karlsson et al. NATURE
- Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes
- (2013) Mads Albertsen et al. NATURE BIOTECHNOLOGY
- Medicines from microbiota
- (2013) Bernat Olle NATURE BIOTECHNOLOGY
- Metagenomic species profiling using universal phylogenetic marker genes
- (2013) Shinichi Sunagawa et al. NATURE METHODS
- Accurate and universal delineation of prokaryotic species
- (2013) Daniel R Mende et al. NATURE METHODS
- The gut microbiota — masters of host development and physiology
- (2013) Felix Sommer et al. NATURE REVIEWS MICROBIOLOGY
- Lowbush Wild Blueberries have the Potential to Modify Gut Microbiota and Xenobiotic Metabolism in the Rat Colon
- (2013) Alison Lacombe et al. PLoS One
- Stool Microbiome and Metabolome Differences between Colorectal Cancer Patients and Healthy Adults
- (2013) Tiffany L. Weir et al. PLoS One
- Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum
- (2013) J. S. McLean et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota
- (2013) P. C. Kashyap et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Commensal Bacteria Control Cancer Response to Therapy by Modulating the Tumor Microenvironment
- (2013) N. Iida et al. SCIENCE
- Predicting and Manipulating Cardiac Drug Inactivation by the Human Gut Bacterium Eggerthella lenta
- (2013) H. J. Haiser et al. SCIENCE
- The Intestinal Microbiota Modulates the Anticancer Immune Effects of Cyclophosphamide
- (2013) S. Viaud et al. SCIENCE
- Gut Microbiota from Twins Discordant for Obesity Modulate Metabolism in Mice
- (2013) V. K. Ridaura et al. SCIENCE
- Interspecific bacterial sensing through airborne signals modulates locomotion and drug resistance
- (2013) Kwang-sun Kim et al. Nature Communications
- Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis
- (2013) Jose U Scher et al. eLife
- Periodontal disease and the oral microbiota in new-onset rheumatoid arthritis
- (2012) Jose U. Scher et al. ARTHRITIS AND RHEUMATISM
- A comparative analysis of the intestinal metagenomes present in guinea pigs (Cavia porcellus) and humans (Homo sapiens)
- (2012) Falk Hildebrand et al. BMC GENOMICS
- The Impact of the Gut Microbiota on Human Health: An Integrative View
- (2012) Jose C. Clemente et al. CELL
- Prebiotic Fiber Increases Hepatic Acetyl CoA Carboxylase Phosphorylation and Suppresses Glucose-Dependent Insulinotropic Polypeptide Secretion More Effectively When Used with Metformin in Obese Rats
- (2012) Kim A. Pyra et al. JOURNAL OF NUTRITION
- A framework for human microbiome research
- (2012) NATURE
- A metagenome-wide association study of gut microbiota in type 2 diabetes
- (2012) Junjie Qin et al. NATURE
- Genomic variation landscape of the human gut microbiome
- (2012) Siegfried Schloissnig et al. NATURE
- A bacterial driver–passenger model for colorectal cancer: beyond the usual suspects
- (2012) Harold Tjalsma et al. NATURE REVIEWS MICROBIOLOGY
- MOCAT: A Metagenomics Assembly and Gene Prediction Toolkit
- (2012) Jens Roat Kultima et al. PLoS One
- Microbial Exposure During Early Life Has Persistent Effects on Natural Killer T Cell Function
- (2012) T. Olszak et al. SCIENCE
- Symptomatic atherosclerosis is associated with an altered gut metagenome
- (2012) Fredrik H. Karlsson et al. Nature Communications
- Global cancer statistics
- (2011) Ahmedin Jemal et al. CA-A CANCER JOURNAL FOR CLINICIANS
- Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma
- (2011) M. Castellarin et al. GENOME RESEARCH
- The human gut virome: Inter-individual variation and dynamic response to diet
- (2011) S. Minot et al. GENOME RESEARCH
- Genomic analysis identifies association of Fusobacterium with colorectal carcinoma
- (2011) A. D. Kostic et al. GENOME RESEARCH
- Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage
- (2011) Chris L Dupont et al. ISME Journal
- Ecology drives a global network of gene exchange connecting the human microbiome
- (2011) Chris S. Smillie et al. NATURE
- Enterotypes of the human gut microbiome
- (2011) Manimozhiyan Arumugam et al. NATURE
- The Pathogenesis of Rheumatoid Arthritis
- (2011) Iain B. McInnes et al. NEW ENGLAND JOURNAL OF MEDICINE
- Towards the Human Colorectal Cancer Microbiome
- (2011) Julian R. Marchesi et al. PLoS One
- Colonic mucosa-associated microbiota is influenced by an interaction of Crohn disease and FUT2 (Secretor) genotype
- (2011) P. Rausch et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Viruses in the faecal microbiota of monozygotic twins and their mothers
- (2010) Alejandro Reyes et al. NATURE
- A human gut microbial gene catalogue established by metagenomic sequencing
- (2010) Junjie Qin et al. NATURE
- Gut Microbiota in Human Adults with Type 2 Diabetes Differs from Non-Diabetic Adults
- (2010) Nadja Larsen et al. PLoS One
- Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors
- (2010) A. K. Benson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A core gut microbiome in obese and lean twins
- (2008) Peter J. Turnbaugh et al. NATURE
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