Genomic signatures of selection, local adaptation and production type characterisation of East Adriatic sheep breeds
出版年份 2023 全文链接
标题
Genomic signatures of selection, local adaptation and production type characterisation of East Adriatic sheep breeds
作者
关键词
-
出版物
Journal of Animal Science and Biotechnology
Volume 14, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2023-11-06
DOI
10.1186/s40104-023-00936-y
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Allelic to genome wide perspectives of swine genetic variation to litter size and its component traits
- (2023) Sakshi Vaishnav et al. MOLECULAR BIOLOGY REPORTS
- Evaluation of truncating variants in the LCORL gene in relation to body size of goats from Switzerland
- (2022) Jennifer Kalinka Graber et al. ANIMAL GENETICS
- Genome variation in tick infestation and cryptic divergence in Tunisian indigenous sheep
- (2022) Abulgasim M. Ahbara et al. BMC GENOMICS
- DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update)
- (2022) Brad T Sherman et al. NUCLEIC ACIDS RESEARCH
- Capturing Genetic Diversity and Selection Signatures of the Endangered Kosovar Balusha Sheep Breed
- (2022) Olusegun O. Adeniyi et al. Genes
- Genome-Wide Association Study of Potential Meat Quality Trait Loci in Ducks
- (2022) Qixin Guo et al. Genes
- Identification of Selection Signals on the X-Chromosome in East Adriatic Sheep: A New Complementary Approach
- (2022) Mario Shihabi et al. Frontiers in Genetics
- Weighted Single-Step Genome-Wide Association Study Uncovers Known and Novel Candidate Genomic Regions for Milk Production Traits and Somatic Cell Score in Valle del Belice Dairy Sheep
- (2022) Hossein Mohammadi et al. Animals
- Whole genome sequencing of Luxi Black Head sheep for screening selection signatures associated with important traits
- (2022) Zhaohua Liu et al. Animal Bioscience
- Genome-wide association and genotype by environment interactions for growth traits in U.S. Red Angus cattle
- (2022) Johanna L. Smith et al. BMC GENOMICS
- The of Neolithic farmers: Herding and hunting on the Dalmatian coast of Croatia
- (2022) Sarah B. McClure et al. QUATERNARY INTERNATIONAL
- High-Density Genomic Characterization of Native Croatian Sheep Breeds
- (2022) Ivana Drzaic et al. Frontiers in Genetics
- The Genetic Factors of the Airway Epithelium Associated with the Pathology of Asthma
- (2022) Maral Ranjbar et al. Genes
- Development and characterization of type I interferon receptor knockout sheep: A model for viral immunology and reproductive signaling
- (2022) Christopher J. Davies et al. Frontiers in Genetics
- Genome-wide association analysis of milk production, somatic cell score, and body conformation traits in Holstein cows
- (2022) Peng Wang et al. Frontiers in Veterinary Science
- Whole genome-wide analysis of DEP family members in sheep (Ovis aries) reveals their potential roles in regulating lactation
- (2022) Zhongchao Gai et al. Chemical and Biological Technologies in Agriculture
- Genome-wide association studies for sperm traits in Assaf sheep breed
- (2021) M. Serrano et al. Animal
- Runs of homozygosity analysis of South African sheep breeds from various production systems investigated using OvineSNP50k data
- (2021) E. F. Dzomba et al. BMC GENOMICS
- IRLnc: a novel functional noncoding RNA contributes to intramuscular fat deposition
- (2021) Ligang Wang et al. BMC GENOMICS
- Quantitative proteomic analysis identified differentially expressed proteins with tail/rump fat deposition in Chinese thin- and fat-tailed lambs
- (2021) Jilong Han et al. PLoS One
- Characterization of Breed Specific Differences in Spermatozoal Transcriptomes of Sheep in Australia
- (2021) Marnie J. Hodge et al. Genes
- Genetic Parameters and Genome-Wide Association Studies of Eight Longevity Traits Representing Either Full or Partial Lifespan in Chinese Holsteins
- (2021) Hailiang Zhang et al. Frontiers in Genetics
- Integrated Genome-Wide Analysis of MicroRNA Expression Quantitative Trait Loci in Pig Longissimus Dorsi Muscle
- (2021) Kaitlyn R. Daza et al. Frontiers in Genetics
- Comparative Transcriptome Analysis of Key Genes and Pathways Activated in Response to Fat Deposition in Two Sheep Breeds With Distinct Tail Phenotype
- (2021) Wei Zhang et al. Frontiers in Genetics
- Integration of selection signatures and multi-trait GWAS reveals polygenic genetic architecture of carcass traits in beef cattle
- (2021) Qunhao Niu et al. GENOMICS
- Whole-genome re-sequencing association study on yearling wool traits in Chinese fine-wool sheep
- (2021) Hongchang Zhao et al. JOURNAL OF ANIMAL SCIENCE
- Genome-wide association analyses identify genotype-by-environment interactions of growth traits in Simmental cattle
- (2021) Camila U. Braz et al. Scientific Reports
- Estimates of genomic inbreeding and identification of candidate regions that differ between Chinese indigenous sheep breeds
- (2021) Jiaxin Liu et al. Journal of Animal Science and Biotechnology
- Identification of Genomic Regions Influencing N-Metabolism and N-Excretion in Lactating Holstein- Friesians
- (2021) Hanne Honerlagen et al. Frontiers in Genetics
- Genome-wide selection signatures detection in Shanghai Holstein cattle population identified genes related to adaption, health and reproduction traits
- (2021) Dengying Liu et al. BMC GENOMICS
- Whole-Genome Resequencing of Worldwide Wild and Domestic Sheep Elucidates Genetic Diversity, Introgression, and Agronomically Important Loci
- (2021) Feng-Hua Lv et al. MOLECULAR BIOLOGY AND EVOLUTION
- Local adaptations of Mediterranean sheep and goats through an integrative approach
- (2021) Bruno Serranito et al. Scientific Reports
- Whole-Genome Selective Scans Detect Genes Associated With Important Phenotypic Traits in Sheep (Ovis aries)
- (2021) Song-Song Xu et al. Frontiers in Genetics
- Genome-wide Association Study for Carcass Primal Cut Yields Using Single-step Bayesian Approach in Hanwoo Cattle
- (2021) Masoumeh Naserkheil et al. Frontiers in Genetics
- Whole-genome sequence analysis unveils different origins of European and Asiatic mouflon and domestication-related genes in sheep
- (2021) Ze-Hui Chen et al. Communications Biology
- The LCORL Locus Is under Selection in Large-Sized Pakistani Goat Breeds
- (2020) Rashid Saif et al. Genes
- Breed- and trait-specific associations define the genetic architecture of calving performance traits in cattle
- (2020) Deirdre C Purfield et al. JOURNAL OF ANIMAL SCIENCE
- Conservation Genomic Analysis of the Croatian Indigenous Black Slavonian and Turopolje Pig Breeds
- (2020) Boris Lukić et al. Frontiers in Genetics
- Copy Number Variation of the PIGY Gene in Sheep and Its Association Analysis with Growth Traits
- (2020) Ziting Feng et al. Animals
- All sheeps and sizes: a genetic investigation of mature body size across sheep breeds reveals a polygenic nature
- (2020) C. J. Posbergh et al. ANIMAL GENETICS
- Historical introgression from wild relatives enhanced climatic adaptation and resistance to pneumonia in sheep
- (2020) Yin-Hong Cao et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genome-wide analysis of genetic diversity and selection signatures in three Indian sheep breeds
- (2020) K.A. Saravanan et al. Livestock Science
- GALLO: An R package for genomic annotation and integration of multiple data sources in livestock for positional candidate loci
- (2020) Pablo A S Fonseca et al. GigaScience
- SorCS2 Controls Functional Expression of Amino Acid Transporter EAAT3 and Protects Neurons from Oxidative Stress and Epilepsy-Induced Pathology
- (2019) Anna R. Malik et al. Cell Reports
- Deep Genome Resequencing Reveals Artificial and Natural Selection for Visual Deterioration, Plateau Adaptability and High Prolificacy in Chinese Domestic Sheep
- (2019) Weimin Wang et al. Frontiers in Genetics
- Runs of homozygosity and signatures of selection: a comparison among eight local Swiss sheep breeds
- (2019) H. Signer‐Hasler et al. ANIMAL GENETICS
- Genomic Sequencing Identifies WNK2 as a Driver in hepatocellular carcinoma and a Risk Factor for Early Recurrence
- (2019) Shao-Lai Zhou et al. JOURNAL OF HEPATOLOGY
- Whole-Genome Resequencing Reveals Loci Associated With Thoracic Vertebrae Number in Sheep
- (2019) Cunyuan Li et al. Frontiers in Genetics
- Investigation of genetic diversity and selection signatures between Sarda and Sardinian Ancestral black, two related sheep breeds with evident morphological differences
- (2019) Alberto Cesarani et al. SMALL RUMINANT RESEARCH
- Genome-Wide Association Study of Meat Quality Traits in Hanwoo Beef Cattle Using Imputed Whole-Genome Sequence Data
- (2019) Mohammed Bedhane et al. Frontiers in Genetics
- Genetic Diversity and Signatures of Selection in 15 Chinese Indigenous Dog Breeds Revealed by Genome-Wide SNPs
- (2019) Qianyong Yang et al. Frontiers in Genetics
- Transcriptome analysis of adipose tissues from two fat-tailed sheep breeds reveals key genes involved in fat deposition
- (2018) Baojun Li et al. BMC GENOMICS
- Revealing the selection history of adaptive loci using genome-wide scans for selection: an example from domestic sheep
- (2018) Christina Marie Rochus et al. BMC GENOMICS
- Comparative proteomic analyses using iTRAQ-labeling provides insights into fiber diversity in sheep and goats
- (2018) Yan Li et al. Journal of Proteomics
- Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds
- (2018) Marina Naval-Sanchez et al. Nature Communications
- Identification of Functional Variants in the FAM13A COPD GWAS Locus by Massively Parallel Reporter Assays
- (2018) Peter J Castaldi et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
- Comparison of transcriptomic landscapes of different lamb muscles using RNA-Seq.
- (2018) Eileen Armstrong et al. PLoS One
- Scans for signatures of selection in Russian cattle breed genomes reveal new candidate genes for environmental adaptation and acclimation
- (2018) Andrey A. Yurchenko et al. Scientific Reports
- PRR14L mutations are associated with chromosome 22 acquired uniparental disomy, age-related clonal hematopoiesis and myeloid neoplasia
- (2018) Andrew Chase et al. LEUKEMIA
- Mouse Genome Database (MGD) 2019
- (2018) Carol J Bult et al. NUCLEIC ACIDS RESEARCH
- Genome-Wide Identification of the Mutation Underlying Fleece Variation and Discriminating Ancestral Hairy Species from Modern Woolly Sheep
- (2017) Julie Demars et al. MOLECULAR BIOLOGY AND EVOLUTION
- Searching for new loci and candidate genes for economically important traits through gene-based association analysis of Simmental cattle
- (2017) Jiangwei Xia et al. Scientific Reports
- Selection signature analysis reveals genes associated with tail type in Chinese indigenous sheep
- (2016) Z. Yuan et al. ANIMAL GENETICS
- Detailed phenotyping identifies genes with pleiotropic effects on body composition
- (2016) Sunduimijid Bolormaa et al. BMC GENOMICS
- Positive selection rather than relaxation of functional constraint drives the evolution of vision during chicken domestication
- (2016) Ming-Shan Wang et al. CELL RESEARCH
- rehh2.0: a reimplementation of the R packagerehhto detect positive selection from haplotype structure
- (2016) Mathieu Gautier et al. Molecular Ecology Resources
- Endomucin prevents leukocyte–endothelial cell adhesion and has a critical role under resting and inflammatory conditions
- (2016) Alisar Zahr et al. Nature Communications
- A genome-wide association study identifies a genomic region for the polycerate phenotype in sheep (Ovis aries)
- (2016) Xue Ren et al. Scientific Reports
- Genomic Regions Associated with Feed Efficiency Indicator Traits in an Experimental Nellore Cattle Population
- (2016) Bianca Ferreira Olivieri et al. PLoS One
- Genetic architecture dissection by genome-wide association analysis reveals avian eggshell ultrastructure traits
- (2016) Zhongyi Duan et al. Scientific Reports
- Genome-wide association study in Chinese Holstein cows reveal two candidate genes for somatic cell score as an indicator for mastitis susceptibility
- (2015) Xiao Wang et al. BMC GENETICS
- Homeodomain proteins: an update
- (2015) Thomas R. Bürglin et al. CHROMOSOMA
- Quantitative candidate gene association studies of metabolic traits in Han Chinese type 2 diabetes patients
- (2015) F.J. Wei et al. GENETICS AND MOLECULAR RESEARCH
- Properties of different selection signature statistics and a new strategy for combining them
- (2015) Y Ma et al. HEREDITY
- Variation in the Ovine Abomasal Lymph Node Transcriptome between Breeds Known to Differ in Resistance to the Gastrointestinal Nematode
- (2015) Albin M. Ahmed et al. PLoS One
- Experimental study of the protective effects of SYVN1 against diabetic retinopathy
- (2015) Shuo Yang et al. Scientific Reports
- Transcriptome profile analysis of adipose tissues from fat and short-tailed sheep
- (2014) Xiaolong Wang et al. GENE
- Identification of complete linkage disequilibrium in the DSG4 gene and its association with wool length and crimp in Chinese indigenous sheep
- (2014) Y.H. Ling et al. GENETICS AND MOLECULAR RESEARCH
- CCDC88B is a novel regulator of maturation and effector functions of T cells during pathological inflammation
- (2014) James M. Kennedy et al. JOURNAL OF EXPERIMENTAL MEDICINE
- Inbreeding and runs of homozygosity: A possible solution to an old problem
- (2014) Ino Curik et al. Livestock Science
- On Detecting Incomplete Soft or Hard Selective Sweeps Using Haplotype Structure
- (2014) Anna Ferrer-Admetlla et al. MOLECULAR BIOLOGY AND EVOLUTION
- selscan: An Efficient Multithreaded Program to Perform EHH-Based Scans for Positive Selection
- (2014) Z. A. Szpiech et al. MOLECULAR BIOLOGY AND EVOLUTION
- SorCS2 Regulates Dopaminergic Wiring and Is Processed into an Apoptotic Two-Chain Receptor in Peripheral Glia
- (2014) Simon Glerup et al. NEURON
- Genome-Wide Association for Growth Traits in Canchim Beef Cattle
- (2014) Marcos E. Buzanskas et al. PLoS One
- Selection Signatures in Worldwide Sheep Populations
- (2014) Maria-Ines Fariello et al. PLoS One
- Haplotype Estimation Using Sequencing Reads
- (2013) Olivier Delaneau et al. AMERICAN JOURNAL OF HUMAN GENETICS
- FAM190A Deficiency Creates a Cell Division Defect
- (2013) Kalpesh Patel et al. AMERICAN JOURNAL OF PATHOLOGY
- SweeD: Likelihood-Based Detection of Selective Sweeps in Thousands of Genomes
- (2013) Pavlos Pavlidis et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genome-Wide Association of Body Fat Distribution in African Ancestry Populations Suggests New Loci
- (2013) Ching-Ti Liu et al. PLoS Genetics
- MED28 regulates MEK1-dependent cellular migration in human breast cancer cells
- (2012) Chun-Yin Huang et al. JOURNAL OF CELLULAR PHYSIOLOGY
- A Genome-Wide Association Study Reveals Loci Influencing Height and Other Conformation Traits in Horses
- (2012) Heidi Signer-Hasler et al. PLoS One
- Footprints of selection in the ancestral admixture of a New World Creole cattle breed
- (2011) MATHIEU GAUTIER et al. MOLECULAR ECOLOGY
- Genome-Wide Association Study Identifies Loci for Body Composition and Structural Soundness Traits in Pigs
- (2011) Bin Fan et al. PLoS One
- Genome-Wide Association Study of Body Weight in Chicken F2 Resource Population
- (2011) Xiaorong Gu et al. PLoS One
- Genetic Diversity of Sheep Breeds from Albania, Greece, and Italy Assessed by Mitochondrial DNA and Nuclear Polymorphisms (SNPs)
- (2011) Lorraine Pariset et al. TheScientificWorldJOURNAL
- The Sphingosine 1-Phosphate (S1P) Signaling Pathway Is Regulated During Pregnancy in Sheep1
- (2010) Kathrin A. Dunlap et al. BIOLOGY OF REPRODUCTION
- Genomic and geographic distribution of SNP-defined runs of homozygosity in Europeans
- (2010) Michael Nothnagel et al. HUMAN MOLECULAR GENETICS
- Hundreds of variants clustered in genomic loci and biological pathways affect human height
- (2010) Hana Lango Allen et al. NATURE
- Genetic hitchhiking versus background selection: the controversy and its implications
- (2010) W. Stephan PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
- (2009) Da Wei Huang et al. Nature Protocols
- Revealing the History of Sheep Domestication Using Retrovirus Integrations
- (2009) B. Chessa et al. SCIENCE
- T-cell regulator RNF125/TRAC-1 belongs to a novel family of ubiquitin ligases with zinc fingers and a ubiquitin-binding domain
- (2008) Ana Lucia Giannini et al. BIOCHEMICAL JOURNAL
- A multiple testing correction method for genetic association studies using correlated single nucleotide polymorphisms
- (2008) Xiaoyi Gao et al. GENETIC EPIDEMIOLOGY
- Role of homeobox genes in the patterning, specification, and differentiation of ectodermal appendages in mammals
- (2008) Olivier Duverger et al. JOURNAL OF CELLULAR PHYSIOLOGY
- Genome-wide association analysis identifies 20 loci that influence adult height
- (2008) Michael N Weedon et al. NATURE GENETICS
- Many sequence variants affecting diversity of adult human height
- (2008) Daniel F Gudbjartsson et al. NATURE GENETICS
- Domestication and early agriculture in the Mediterranean Basin: Origins, diffusion, and impact
- (2008) M. A. Zeder PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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