Diversity and connectedness of brine shrimp viruses in global hypersaline ecosystems

Virome characterization of game animals in China reveals a spectrum of emerging pathogens

(2022) Wan-Ting He et al.   CELL

Diversity and evolution of the animal virome

(2022) Erin Harvey et al.   NATURE REVIEWS MICROBIOLOGY

RNA viromes from terrestrial sites across China expand environmental viral diversity

(2022) Yan-Mei Chen et al.   Nature Microbiology

Cases report of covert mortality nodavirus infection in indoor farming Penaeus vannamei

(2022) Liang Yao et al.   Aquaculture Reports

Salt to conserve: a review on the ecology and preservation of hypersaline ecosystems

(2021) Mattia Saccò et al.   BIOLOGICAL REVIEWS

Natural infection of covert mortality nodavirus affects Zebrafish ( Danio rerio )

(2021) Chong Wang et al.   JOURNAL OF FISH DISEASES

Viromes in marine ecosystems reveal remarkable invertebrate RNA virus diversity

(2021) Yu-Yi Zhang et al.   Science China-Life Sciences

A Novel Hepe-Like Virus from Farmed Giant Freshwater Prawn Macrobrachium rosenbergii

(2020) Xuan Dong et al.   Viruses-Basel

Genomic characterization of covert mortality nodavirus from farming shrimp: Evidence for a new species within the family Nodaviridae

(2020) Tingting Xu et al.   VIRUS RESEARCH

Suppression of Artemia spp. (Crustacea, Anostraca) populations by predators in the Crimean hypersaline lakes. A review of the evidence

(2019) Nickolai Shadrin et al.   INTERNATIONAL REVIEW OF HYDROBIOLOGY

Marine DNA Viral Macro- and Microdiversity from Pole to Pole

(2019) Ann C. Gregory et al.   CELL

Review on integrated production of the brine shrimp Artemia in solar salt ponds

(2019) Gilbert Van Stappen et al.   Reviews in Aquaculture

Stable distinct core eukaryotic viromes in different mosquito species from Guadeloupe, using single mosquito viral metagenomics

(2019) Chenyan Shi et al.   Microbiome

Using Metagenomics to Characterize an Expanding Virosphere

(2018) Yong-Zhen Zhang et al.   CELL

Halophilic & halotolerant prokaryotes in humans

(2018) El Hadji Seck et al.   Future Microbiology

The evolutionary history of vertebrate RNA viruses

(2018) Mang Shi et al.   NATURE

Infection of covert mortality nodavirus in Japanese flounder reveals host jump of the emerging alphanodavirus

(2018) Chong Wang et al.   JOURNAL OF GENERAL VIROLOGY

Comparative analysis of rodent and small mammal viromes to better understand the wildlife origin of emerging infectious diseases

(2018) Zhiqiang Wu et al.   Microbiome

Prevalence and distribution of covert mortality nodavirus (CMNV) in cultured crustacean

(2017) Qingli Zhang et al.   VIRUS RESEARCH

Redefining the invertebrate RNA virosphere

(2016) Mang Shi et al.   NATURE

Microbial diversity of hypersaline environments: a metagenomic approach

(2015) Antonio Ventosa et al.   CURRENT OPINION IN MICROBIOLOGY

Artemia franciscana as a vector for infectious myonecrosis virus (IMNV) to Litopenaeus vannamei juvenile

(2015) Suzianny Maria Bezerra Cabral da Silva et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

A new nodavirus is associated with covert mortality disease of shrimp

(2014) Q. Zhang et al.   JOURNAL OF GENERAL VIROLOGY

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Dynamic Viral Populations in Hypersaline Systems as Revealed by Metagenomic Assembly

(2012) Joanne B. Emerson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The Brine Shrimp Artemia: Adapted to Critical Life Conditions

(2012) Gonzalo M. Gajardo et al.   Frontiers in Physiology

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

The metavirome of a hypersaline environment

(2010) Fernando Santos et al.   ENVIRONMENTAL MICROBIOLOGY

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS