Multi-iPPseEvo: A Multi-label Classifier for Identifying Human Phosphorylated Proteins by Incorporating Evolutionary Information into Chou′s General PseAAC via Grey System Theory

Recent Progress in Predicting Posttranslational Modification Sites in Proteins

(2015) Yan Xu et al.   CURRENT TOPICS IN MEDICINAL CHEMISTRY

A multi-label classification based approach for sentiment classification

(2015) Shuhua Monica Liu et al.   EXPERT SYSTEMS WITH APPLICATIONS

Discrimination of acidic and alkaline enzyme using Chou’s pseudo amino acid composition in conjunction with probabilistic neural network model

(2015) Zaheer Ullah Khan et al.   JOURNAL OF THEORETICAL BIOLOGY

Prediction of β-lactamase and its class by Chou’s pseudo-amino acid composition and support vector machine

(2015) Ravindra Kumar et al.   JOURNAL OF THEORETICAL BIOLOGY

Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou׳s general PseAAC

(2015) Abdollah Dehzangi et al.   JOURNAL OF THEORETICAL BIOLOGY

Impacts of Bioinformatics to Medicinal Chemistry

(2015) Kuo-Chen Chou   Medicinal Chemistry

Pseudo nucleotide composition or PseKNC: an effective formulation for analyzing genomic sequences

(2015) Wei Chen et al.   Molecular BioSystems

Pse-in-One: a web server for generating various modes of pseudo components of DNA, RNA, and protein sequences

(2015) Bin Liu et al.   NUCLEIC ACIDS RESEARCH

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(2014)   IEEE-ACM Transactions on Computational Biology and Bioinformatics

PseAAC-General: Fast Building Various Modes of General Form of Chou’s Pseudo-Amino Acid Composition for Large-Scale Protein Datasets

(2014) Pufeng Du et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

iHyd-PseAAC: Predicting Hydroxyproline and Hydroxylysine in Proteins by Incorporating Dipeptide Position-Specific Propensity into Pseudo Amino Acid Composition

(2014) Yan Xu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Chou׳s pseudo amino acid composition improves sequence-based antifreeze protein prediction

(2014) Sukanta Mondal et al.   JOURNAL OF THEORETICAL BIOLOGY

PseDNA-Pro: DNA-Binding Protein Identification by Combining Chou’s PseAAC and Physicochemical Distance Transformation

(2014) Bin Liu et al.   Molecular Informatics

propy: a tool to generate various modes of Chou’s PseAAC

(2013) Dong-Sheng Cao et al.   BIOINFORMATICS

Protein phosphorylation analysis based on proton release detection: Potential tools for drug discovery

(2013) Nikhil Bhalla et al.   BIOSENSORS & BIOELECTRONICS

Multi-label classification for colon cancer using histopathological images

(2013) Yan Xu et al.   MICROSCOPY RESEARCH AND TECHNIQUE

iLoc-Animal: a multi-label learning classifier for predicting subcellular localization of animal proteins

(2013) Wei-Zhong Lin et al.   Molecular BioSystems

Some remarks on predicting multi-label attributes in molecular biosystems

(2013) Kuo-Chen Chou   Molecular BioSystems

Protein Remote Homology Detection by Combining Chou’s Pseudo Amino Acid Composition and Profile-Based Protein Representation

(2013) Bin Liu et al.   Molecular Informatics

Multi-label classification with a reject option

(2013) Ignazio Pillai et al.   PATTERN RECOGNITION

iSNO-AAPair: incorporating amino acid pairwise coupling into PseAAC for predicting cysteineS-nitrosylation sites in proteins

(2013) Yan Xu et al.   PeerJ

Electrochemical Investigations of Tau Protein Phosphorylations and Interactions with Pin1

(2012) Sanela Martić et al.   CHEMISTRY & BIODIVERSITY

Enhancing Membrane Protein Subcellular Localization Prediction by Parallel Fusion of Multi-View Features

(2012) Dongjun Yu et al.   IEEE TRANSACTIONS ON NANOBIOSCIENCE

Virus-mPLoc: A Fusion Classifier for Viral Protein Subcellular Location Prediction by Incorporating Multiple Sites

(2012) Hong-Bin Shen et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

Correction: Perceptual Grouping over Time within and across Auditory and Tactile Modalities

(2012) I-Fan Lin et al.   PLoS One

Prediction of membrane proteins using split amino acid and ensemble classification

(2011) Maqsood Hayat et al.   AMINO ACIDS

iLoc-Plant: a multi-label classifier for predicting the subcellular localization of plant proteins with both single and multiple sites

(2011) Zhi-Cheng Wu et al.   Molecular BioSystems

Multilabel classification using heterogeneous ensemble of multi-label classifiers

(2011) Muhammad Atif Tahir et al.   PATTERN RECOGNITION LETTERS

Gneg-mPLoc: A top-down strategy to enhance the quality of predicting subcellular localization of Gram-negative bacterial proteins

(2010) Hong-Bin Shen et al.   JOURNAL OF THEORETICAL BIOLOGY

Some remarks on protein attribute prediction and pseudo amino acid composition

(2010) Kuo-Chen Chou   JOURNAL OF THEORETICAL BIOLOGY

Pseudo Amino Acid Composition and its Applications in Bioinformatics, Proteomics and System Biology

(2009) Kuo-Chen Chou   Current Proteomics

QuatIdent: A Web Server for Identifying Protein Quaternary Structural Attribute by Fusing Functional Domain and Sequential Evolution Information

(2009) Hong-Bin Shen et al.   JOURNAL OF PROTEOME RESEARCH

Ml-rbf: RBF Neural Networks for Multi-Label Learning

(2009) Min-Ling Zhang   NEURAL PROCESSING LETTERS

Gpos-mPLoc: A Top-Down Approach to Improve the Quality of Predicting Subcellular Localization of Gram-Positive Bacterial Proteins

(2009) Hong-Bin Shen et al.   PROTEIN AND PEPTIDE LETTERS

Multi Label Learning for Prediction of Human Protein Subcellular Localizations

(2009) Lin Zhu et al.   PROTEIN JOURNAL

Peptide Biosensors for the Electrochemical Measurement of Protein Kinase Activity

(2008) Kagan Kerman et al.   ANALYTICAL CHEMISTRY

Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms

(2008) Kuo-Chen Chou et al.   Nature Protocols