标题
Recent advances in the genomic resources for sheep
作者
关键词
-
出版物
MAMMALIAN GENOME
Volume 34, Issue 4, Pages 545-558
出版商
Springer Science and Business Media LLC
发表日期
2023-09-27
DOI
10.1007/s00335-023-10018-z
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- A sheep pangenome reveals the spectrum of structural variations and their effects on tail phenotypes
- (2023) Ran Li et al. GENOME RESEARCH
- An atlas of regulatory elements in chicken: A resource for chicken genetics and genomics
- (2023) Zhangyuan Pan et al. Science Advances
- A cattle graph genome incorporating global breed diversity
- (2022) A. Talenti et al. Nature Communications
- An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome
- (2022) Kimberly M Davenport et al. GigaScience
- The complete sequence of a human genome
- (2022) Sergey Nurk et al. SCIENCE
- The Complex and Diverse Genetic Architecture of the Absence of Horns (Polledness) in Domestic Ruminants, including Goats and Sheep
- (2022) Rebecca Simon et al. Genes
- Genetic Basis of Dorper Sheep (Ovis aries) Revealed by Long-Read De Novo Genome Assembly
- (2022) Guoyan Qiao et al. Frontiers in Genetics
- Preliminary Results about Lamb Meat Tenderness Based on the Study of Novel Isoforms and Alternative Splicing Regulation Pathways Using Iso-seq, RNA-seq and CTCF ChIP-seq Data
- (2022) Zehu Yuan et al. Foods
- Genomic analyses of Pamir argali, Tibetan sheep, and their hybrids provide insights into chromosome evolution, phenotypic variation, and germplasm innovation
- (2022) Xin Li et al. GENOME RESEARCH
- A multi-tissue atlas of regulatory variants in cattle
- (2022) Shuli Liu et al. NATURE GENETICS
- Graphia: A platform for the graph-based visualisation and analysis of high dimensional data
- (2022) Tom C. Freeman et al. PLoS Computational Biology
- The Sheep as a Large Animal Model for the Investigation and Treatment of Human Disorders
- (2022) Ashik Banstola et al. Biology-Basel
- Genetic diversity of two native sheep breeds by genome-wide analysis of single nucleotide polymorphisms
- (2022) Karolína Machová et al. Animal
- Author Correction: Endothelial cell heterogeneity and microglia regulons revealed by a pig cell landscape at single-cell level
- (2022) Fei Wang et al. Nature Communications
- Whole-Genome Sequence Data Suggest Environmental Adaptation of Ethiopian Sheep Populations
- (2021) Pamela Wiener et al. Genome Biology and Evolution
- Genome-wide fine-mapping identifies pleiotropic and functional variants that predict many traits across global cattle populations
- (2021) Ruidong Xiang et al. Nature Communications
- Characterization of a haplotype-reference panel for genotyping by low-pass sequencing in Swiss Large White pigs
- (2021) Adéla Nosková et al. BMC GENOMICS
- Transcription initiation mapping in 31 bovine tissues reveals complex promoter activity, pervasive transcription, and tissue-specific promoter usage
- (2021) Daniel E. Goszczynski et al. GENOME RESEARCH
- Novel functional sequences uncovered through a bovine multiassembly graph
- (2021) Danang Crysnanto et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research
- (2021) Colin Kern et al. Nature Communications
- Characterizing Genetic Regulatory Elements in Ovine Tissues
- (2021) Kimberly M. Davenport et al. Frontiers in Genetics
- British Sheep Breeds as a Part of World Sheep Gene Pool Landscape: Looking into Genomic Applications
- (2021) Michael N. Romanov et al. Animals
- A pig BodyMap transcriptome reveals diverse tissue physiologies and evolutionary dynamics of transcription
- (2021) Long Jin et al. Nature Communications
- Reference Transcriptomes of Porcine Peripheral Immune Cells Created Through Bulk and Single-Cell RNA Sequencing
- (2021) Juber Herrera-Uribe et al. Frontiers in Genetics
- iSheep: an Integrated Resource for Sheep Genome, Variant and Phenotype
- (2021) Zhong-Huang Wang et al. Frontiers in Genetics
- The FAANG Data Portal: Global, Open-Access, “FAIR”, and Richly Validated Genotype to Phenotype Data for High-Quality Functional Annotation of Animal Genomes
- (2021) Peter W. Harrison et al. Frontiers in Genetics
- Establishment of a pig CRISPR/Cas9 knockout library for functional gene screening in pig cells
- (2021) Chuanzhao Yu et al. Biotechnology Journal
- Ensembl 2022
- (2021) Fiona Cunningham et al. NUCLEIC ACIDS RESEARCH
- Selection of breed-specific SNPs in three Indian sheep breeds using ovine 50 K array
- (2021) Harshit Kumar et al. SMALL RUMINANT RESEARCH
- Integrative analysis of Iso-Seq and RNA-seq data reveals transcriptome complexity and differentially expressed transcripts in sheep tail fat
- (2021) Zehu Yuan et al. PeerJ
- Beyond the genome: a perspective on the use of DNA methylation profiles as a tool for the livestock industry
- (2021) Shannon Clarke et al. Animal Frontiers
- Genetic structure and admixture in sheep from terminal breeds in the United States
- (2020) K. M. Davenport et al. ANIMAL GENETICS
- Continuous chromosome-scale haplotypes assembled from a single interspecies F1 hybrid of yak and cattle
- (2020) Edward S Rice et al. GigaScience
- Whole-genome resequencing of wild and domestic sheep identifies genes associated with morphological and agronomic traits
- (2020) Xin Li et al. Nature Communications
- Paternal Origins and Migratory Episodes of Domestic Sheep
- (2020) Juan Deng et al. CURRENT BIOLOGY
- A Hu sheep genome with the first ovine Y chromosome reveal introgression history after sheep domestication
- (2020) Ran Li et al. Science China-Life Sciences
- Whole genome analysis of water buffalo and global cattle breeds highlights convergent signatures of domestication
- (2020) Prasun Dutta et al. Nature Communications
- Global Analysis of Transcription Start Sites in the New Ovine Reference Genome (Oar rambouillet v1.0)
- (2020) Mazdak Salavati et al. Frontiers in Genetics
- Genome-Wide Variation, Candidate Regions and Genes Associated With Fat Deposition and Tail Morphology in Ethiopian Indigenous Sheep
- (2019) Abulgasim Ahbara et al. Frontiers in Genetics
- Benefits and limitations of genome-wide association studies
- (2019) Vivian Tam et al. NATURE REVIEWS GENETICS
- Livestock Genomics for Developing Countries – African Examples in Practice
- (2019) Karen Marshall et al. Frontiers in Genetics
- 28 The functional annotation of the sheep genome project
- (2019) Brenda M Murdoch JOURNAL OF ANIMAL SCIENCE
- Application of genome editing in farm animals: cattle
- (2019) Alison L. Van Eenennaam TRANSGENIC RESEARCH
- CRISPR/Cas9 mediated generation of an ovine model for infantile neuronal ceroid lipofuscinosis (CLN1 disease)
- (2019) S. L. Eaton et al. Scientific Reports
- Quantifying the contribution of sequence variants with regulatory and evolutionary significance to 34 bovine complex traits
- (2019) Ruidong Xiang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Towards the Complete Goat Pan-Genome by Recovering Missing Genomic Segments From the Reference Genome
- (2019) Ran Li et al. Frontiers in Genetics
- Multi-species annotation of transcriptome and chromatin structure in domesticated animals
- (2019) Sylvain Foissac et al. BMC BIOLOGY
- Long reads: their purpose and place
- (2018) Martin O Pollard et al. HUMAN MOLECULAR GENETICS
- Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds
- (2018) Marina Naval-Sanchez et al. Nature Communications
- Convergent genomic signatures of domestication in sheep and goats
- (2018) Florian J. Alberto et al. Nature Communications
- Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris
- (2018) et al. NATURE
- De novo assembly of haplotype-resolved genomes with trio binning
- (2018) Sergey Koren et al. NATURE BIOTECHNOLOGY
- Harnessing genomic information for livestock improvement
- (2018) Michel Georges et al. NATURE REVIEWS GENETICS
- Functional Annotation of Animal Genomes (FAANG): Current Achievements and Roadmap
- (2018) Elisabetta Giuffra et al. Annual Review of Animal Biosciences
- 1000 Bull Genomes Project to Map Simple and Complex Genetic Traits in Cattle: Applications and Outcomes
- (2018) Ben J. Hayes et al. Annual Review of Animal Biosciences
- A golden goat genome
- (2017) Kim C Worley NATURE GENETICS
- Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome
- (2017) Derek M Bickhart et al. NATURE GENETICS
- Whole genome structural analysis of Caribbean hair sheep reveals quantitative link to West African ancestry
- (2017) Gordon L. Spangler et al. PLoS One
- A high resolution atlas of gene expression in the domestic sheep (Ovis aries)
- (2017) Emily L. Clark et al. PLoS Genetics
- Computational pan-genomics: status, promises and challenges
- (2016) BRIEFINGS IN BIOINFORMATICS
- P1009 Sheep reference genome sequence updates: Texel improvements and Rambouillet progress
- (2016) Y. Liu et al. JOURNAL OF ANIMAL SCIENCE
- Whole-Genome Sequencing of Native Sheep Provides Insights into Rapid Adaptations to Extreme Environments
- (2016) Ji Yang et al. MOLECULAR BIOLOGY AND EVOLUTION
- Climate change: Production performance, health issues, greenhouse gas emissions and mitigation strategies in sheep and goat farming
- (2016) R. Marino et al. SMALL RUMINANT RESEARCH
- The Ensembl gene annotation system
- (2016) Bronwen L. Aken et al. Database-The Journal of Biological Databases and Curation
- A 1.8-kb insertion in the 3′-UTR ofRXFP2is associated with polledness in sheep
- (2015) Natalie Wiedemar et al. ANIMAL GENETICS
- Genome-wide analysis reveals population structure and selection in Chinese indigenous sheep breeds
- (2015) Caihong Wei et al. BMC GENOMICS
- Sustainable food production: constraints, challenges and choices by 2050
- (2015) Fiona C. McKenzie et al. Food Security
- The Ensembl Regulatory Build
- (2015) Daniel R Zerbino et al. GENOME BIOLOGY
- Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project
- (2015) Leif Andersson et al. GENOME BIOLOGY
- Recent advances in understanding the genetic resources of sheep breeds locally-adapted to the UK uplands: opportunities they offer for sustainable productivity
- (2015) Dianna Bowles Frontiers in Genetics
- Effect and mode of action of the Texel muscling QTL (TM-QTL) on carcass traits in purebred Texel lambs
- (2014) J. M. Macfarlane et al. Animal
- Evaluating the roles of directed breeding and gene flow in animal domestication
- (2014) F. B. Marshall et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The sheep genome illuminates biology of the rumen and lipid metabolism
- (2014) Y. Jiang et al. SCIENCE
- Genome edited sheep and cattle
- (2014) Chris Proudfoot et al. TRANSGENIC RESEARCH
- The future of livestock breeding: genomic selection for efficiency, reduced emissions intensity, and adaptation
- (2012) Ben J. Hayes et al. TRENDS IN GENETICS
- Genome-Wide Analysis of the World's Sheep Breeds Reveals High Levels of Historic Mixture and Strong Recent Selection
- (2012) James W. Kijas et al. PLOS BIOLOGY
- Genes Contributing to Genetic Variation of Muscling in Sheep
- (2012) Ross L. Tellam et al. Frontiers in Genetics
- Accuracy of estimated genomic breeding values for wool and meat traits in a multi-breed sheep population
- (2010) H. D. Daetwyler et al. Animal Production Science
- A Genome Wide Survey of SNP Variation Reveals the Genetic Structure of Sheep Breeds
- (2009) James W. Kijas et al. PLoS One
- Trypanotolerance in small ruminants of sub-Saharan Africa
- (2009) Stanny Geerts et al. TRENDS IN PARASITOLOGY
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