Successful 3D imaging of cleared biological samples with light sheet fluorescence microscopy
出版年份 2023 全文链接
标题
Successful 3D imaging of cleared biological samples with light sheet fluorescence microscopy
作者
关键词
-
出版物
JOURNAL OF CELL BIOLOGY
Volume 222, Issue 11, Pages -
出版商
Rockefeller University Press
发表日期
2023-10-17
DOI
10.1083/jcb.202307143
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Tissue libraries enable rapid determination of conditions that preserve antibody labeling in cleared mouse and human tissue
- (2023) Theodore J Zwang et al. eLife
- Deep learning-based adaptive optics for light sheet fluorescence microscopy
- (2023) Mani Ratnam Rai et al. Biomedical Optics Express
- Volumetric light sheet imaging with adaptive optics correction
- (2023) Yang Liu et al. Biomedical Optics Express
- Tissue clearing and immunostaining to visualize the spatial organization of vasculature and tumor cells in mouse liver
- (2023) Nicola Frenkel et al. Frontiers in Oncology
- Light-sheets and smart microscopy, an exciting future is dawning
- (2023) Stephan Daetwyler et al. Communications Biology
- Whole-body cellular mapping in mouse using standard IgG antibodies
- (2023) Hongcheng Mai et al. NATURE BIOTECHNOLOGY
- Seeing the Forest and Its Trees Together: Implementing 3D Light Microscopy Pipelines for Cell Type Mapping in the Mouse Brain
- (2022) Kyra T. Newmaster et al. Frontiers in Neuroanatomy
- Comparative Analyses of Clearing Efficacies of Tissue Clearing Protocols by Using a Punching Assisted Clarity Analysis
- (2022) Jiwon Woo et al. Frontiers in Bioengineering and Biotechnology
- Scalable tissue labeling and clearing of intact human organs
- (2022) Hongcheng Mai et al. Nature Protocols
- Quality assessment in light microscopy for routine use through simple tools and robust metrics
- (2022) Orestis Faklaris et al. JOURNAL OF CELL BIOLOGY
- Practical considerations for quantitative light sheet fluorescence microscopy
- (2022) Chad M. Hobson et al. NATURE METHODS
- An analysis modality for vascular structures combining tissue-clearing technology and topological data analysis
- (2022) Kei Takahashi et al. Nature Communications
- Immunostaining of Whole-Mount Retinas with the CLARITY Tissue Clearing Method
- (2021) Elizabeth J. Alessio et al. Jove-Journal of Visualized Experiments
- Navigating across multi-dimensional space of tissue clearing parameters
- (2021) Sergiy V Avilov Methods and Applications in Fluorescence
- A guidebook for DISCO tissue clearing
- (2021) Muge Molbay et al. Molecular Systems Biology
- Tissue clearing and imaging methods for cardiovascular development
- (2021) Hana Kolesová et al. iScience
- QUAREP‐LiMi: A community‐driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy
- (2021) Glyn Nelson et al. JOURNAL OF MICROSCOPY
- QUAREP-LiMi: a community endeavor to advance quality assessment and reproducibility in light microscopy
- (2021) Ulrike Boehm et al. NATURE METHODS
- Tutorial: practical considerations for tissue clearing and imaging
- (2021) Kurt R. Weiss et al. Nature Protocols
- Innovations in ex vivo Light Sheet Fluorescence Microscopy
- (2021) Pablo Delgado-Rodriguez et al. PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY
- Whole-Mount Kidney Clearing and Visualization Reveal Renal Sympathetic Hyperinnervation in Heart Failure Mice
- (2021) Chao Wu et al. Frontiers in Physiology
- Tissue clearing and 3D imaging in developmental biology
- (2021) Alba Vieites-Prado et al. DEVELOPMENT
- Light-sheet microscopy at high resolution
- (2021) Reto Fiolka NATURE BIOTECHNOLOGY
- Navigating the Light-Sheet Image Analysis Software Landscape: Concepts for Driving Cohesion From Data Acquisition to Analysis
- (2021) Holly C. Gibbs et al. Frontiers in Cell and Developmental Biology
- Tissue clearing and its applications in neuroscience
- (2020) Hiroki R. Ueda et al. NATURE REVIEWS NEUROSCIENCE
- Whole-Brain Profiling of Cells and Circuits in Mammals by Tissue Clearing and Light-Sheet Microscopy
- (2020) Hiroki R. Ueda et al. NEURON
- Live-cell imaging in the era of too many microscopes
- (2020) William C. Lemon et al. CURRENT OPINION IN CELL BIOLOGY
- Tissue Clearing and Expansion Methods for Imaging Brain Pathology in Neurodegeneration: From Circuits to Synapses and Beyond
- (2020) Arnaldo Parra-Damas et al. Frontiers in Neuroscience
- FDISCO: Advanced solvent-based clearing method for imaging whole organs
- (2019) Yisong Qi et al. Science Advances
- Designing a rigorous microscopy experiment: Validating methods and avoiding bias
- (2019) Anna Payne-Tobin Jost et al. JOURNAL OF CELL BIOLOGY
- Light-Sheet Microscopy and Its Potential for Understanding Developmental Processes
- (2019) Yinan Wan et al. Annual Review of Cell and Developmental Biology
- The mesoSPIM initiative: open-source light-sheet microscopes for imaging cleared tissue
- (2019) Fabian F. Voigt et al. NATURE METHODS
- Monitoring microbial communities using light sheet fluorescence microscopy
- (2018) Raghuveer Parthasarathy CURRENT OPINION IN MICROBIOLOGY
- Light sheet imaging comes of age
- (2018) Simon C. Watkins et al. JOURNAL OF CELL BIOLOGY
- Light-sheet microscopy: a tutorial
- (2018) Omar E. Olarte et al. Advances in Optics and Photonics
- Optimizing tissue-clearing conditions based on analysis of the critical factors affecting tissue-clearing procedures
- (2018) June Hoan Kim et al. Scientific Reports
- Chemical Landscape for Tissue Clearing Based on Hydrophilic Reagents
- (2018) Kazuki Tainaka et al. Cell Reports
- Evaluation of seven optical clearing methods in mouse brain
- (2018) Peng Wan et al. Neurophotonics
- Panoptic imaging of transparent mice reveals whole-body neuronal projections and skull–meninges connections
- (2018) Ruiyao Cai et al. NATURE NEUROSCIENCE
- A practical guide to adaptive light-sheet microscopy
- (2018) Loïc A. Royer et al. Nature Protocols
- A beginner’s guide to tissue clearing
- (2017) Pablo Ariel INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY
- A guide to light-sheet fluorescence microscopy for multiscale imaging
- (2017) Rory M Power et al. NATURE METHODS
- Adaptive optical fluorescence microscopy
- (2017) Na Ji NATURE METHODS
- Imaging tissue-mimic with light sheet microscopy: A comparative guideline
- (2017) Jordi Andilla et al. Scientific Reports
- Whole-Body Profiling of Cancer Metastasis with Single-Cell Resolution
- (2017) Shimpei I. Kubota et al. Cell Reports
- Fast Inertia-Free Volumetric Light-Sheet Microscope
- (2017) Martí Duocastella et al. ACS Photonics
- Light-sheet microscopy for everyone? Experience of building an OpenSPIM to study flatworm development
- (2016) Johannes Girstmair et al. BMC DEVELOPMENTAL BIOLOGY
- Mapping of Brain Activity by Automated Volume Analysis of Immediate Early Genes
- (2016) Nicolas Renier et al. CELL
- Fully Automated Evaluation of Total Glomerular Number and Capillary Tuft Size in Nephritic Kidneys Using Lightsheet Microscopy
- (2016) Anika Klingberg et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Selective plane illumination microscopy with a light sheet of uniform thickness formed by an electrically tunable lens
- (2016) Per Niklas Hedde et al. MICROSCOPY RESEARCH AND TECHNIQUE
- Shrinkage-mediated imaging of entire organs and organisms using uDISCO
- (2016) Chenchen Pan et al. NATURE METHODS
- eduSPIM: Light Sheet Microscopy in the Museum
- (2016) Wiebke Jahr et al. PLoS One
- 3D imaging in CUBIC-cleared mouse heart tissue: going deeper
- (2016) Imke Nehrhoff et al. Biomedical Optics Express
- Super-Resolution Mapping of Neuronal Circuitry With an Index-Optimized Clearing Agent
- (2016) Meng-Tsen Ke et al. Cell Reports
- Using Light Sheet Fluorescence Microscopy to Image Zebrafish Eye Development
- (2016) Jaroslav Icha et al. Jove-Journal of Visualized Experiments
- Three Dimensional Human Neuro-Spheroid Model of Alzheimer’s Disease Based on Differentiated Induced Pluripotent Stem Cells
- (2016) Han-Kyu Lee et al. PLoS One
- Simple, Scalable Proteomic Imaging for High-Dimensional Profiling of Intact Systems
- (2015) Evan Murray et al. CELL
- Clarifying Tissue Clearing
- (2015) Douglas S. Richardson et al. CELL
- Guide to light-sheet microscopy for adventurous biologists
- (2015) Emmanuel G Reynaud et al. NATURE METHODS
- Extend the field of view of selective plan illumination microscopy by tiling the excitation light sheet
- (2015) Liang Gao OPTICS EXPRESS
- Optimization of the excitation light sheet in selective plane illumination microscopy
- (2015) Liang Gao Biomedical Optics Express
- Scalable and DiI-compatible optical clearance of the mammalian brain
- (2015) Bing Hou et al. Frontiers in Neuroanatomy
- Fluorescent-Protein Stabilization and High-Resolution Imaging of Cleared, Intact Mouse Brains
- (2015) Martin K. Schwarz et al. PLoS One
- Whole-Brain Imaging with Single-Cell Resolution Using Chemical Cocktails and Computational Analysis
- (2014) Etsuo A. Susaki et al. CELL
- iDISCO: A Simple, Rapid Method to Immunolabel Large Tissue Samples for Volume Imaging
- (2014) Nicolas Renier et al. CELL
- Whole-Body Imaging with Single-Cell Resolution by Tissue Decolorization
- (2014) Kazuki Tainaka et al. CELL
- A Simple Method for 3D Analysis of Immunolabeled Axonal Tracts in a Transparent Nervous System
- (2014) Morgane Belle et al. Cell Reports
- Structural and molecular interrogation of intact biological systems
- (2013) Kwanghun Chung et al. NATURE
- OpenSPIM: an open-access light-sheet microscopy platform
- (2013) Peter G Pitrone et al. NATURE METHODS
- Quality Assurance Testing for Modern Optical Imaging Systems
- (2011) Robert F. Stack et al. MICROSCOPY AND MICROANALYSIS
- Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain
- (2011) Hiroshi Hama et al. NATURE NEUROSCIENCE
- Software for bead-based registration of selective plane illumination microscopy data
- (2010) Stephan Preibisch et al. NATURE METHODS
- Light sheet‐based fluorescence microscopy: More dimensions, more photons, and less photodamage
- (2008) Emmanuel G. Reynaud et al. HFSP Journal
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started