Next Generation Sequencing of Actinobacteria for the Discovery of Novel Natural Products
出版年份 2016 全文链接
标题
Next Generation Sequencing of Actinobacteria for the Discovery of Novel Natural Products
作者
关键词
-
出版物
Marine Drugs
Volume 14, Issue 4, Pages 78
出版商
MDPI AG
发表日期
2016-04-13
DOI
10.3390/md14040078
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- A genomics-led approach to deciphering the mechanism of thiotetronate antibiotic biosynthesis
- (2016) W. Tao et al. Chemical Science
- Biosynthesis of the Novel Macrolide Antibiotic Anthracimycin
- (2015) Silke Alt et al. ACS Chemical Biology
- Genome-Directed Lead Discovery: Biosynthesis, Structure Elucidation, and Biological Evaluation of Two Families of Polyene Macrolactams against Trypanosoma brucei
- (2015) Christopher J. Schulze et al. ACS Chemical Biology
- Identification and Heterologous Expression of the Chaxamycin Biosynthesis Gene Cluster from Streptomyces leeuwenhoekii
- (2015) Jean Franco Castro et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Misassembly detection using paired-end sequence reads and optical mapping data
- (2015) Martin D. Muggli et al. BIOINFORMATICS
- The Streptomyces leeuwenhoekii genome: de novo sequencing and assembly in single contigs of the chromosome, circular plasmid pSLE1 and linear plasmid pSLE2
- (2015) Juan Pablo Gomez-Escribano et al. BMC GENOMICS
- One chromosome, one contig: complete microbial genomes from long-read sequencing and assembly
- (2015) Sergey Koren et al. CURRENT OPINION IN MICROBIOLOGY
- Combining Mass Spectrometric Metabolic Profiling with Genomic Analysis: A Powerful Approach for Discovering Natural Products from Cyanobacteria
- (2015) Karin Kleigrewe et al. JOURNAL OF NATURAL PRODUCTS
- The Sound of Silence: Activating Silent Biosynthetic Gene Clusters in Marine Microorganisms
- (2015) F. Reen et al. Marine Drugs
- The marine actinomycete genus Salinispora: a model organism for secondary metabolite discovery
- (2015) Paul R. Jensen et al. NATURAL PRODUCT REPORTS
- Minimum Information about a Biosynthetic Gene cluster
- (2015) Marnix H Medema et al. Nature Chemical Biology
- The re-emergence of natural products for drug discovery in the genomics era
- (2015) Alan L. Harvey et al. NATURE REVIEWS DRUG DISCOVERY
- antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters
- (2015) Tilmann Weber et al. NUCLEIC ACIDS RESEARCH
- Activating a Cryptic Ansamycin Biosynthetic Gene Cluster To Produce Three New Naphthalenic Octaketide Ansamycins with n-Pentyl and n-Butyl Side Chains
- (2015) Shanren Li et al. ORGANIC LETTERS
- Targeted metagenomics as a tool to tap into marine natural product diversity for the discovery and production of drug candidates
- (2015) Marla Trindade et al. Frontiers in Microbiology
- NxRepair: error correction inde novosequence assembly using Nextera mate pairs
- (2015) Rebecca R. Murphy et al. PeerJ
- Nanopore-based Fourth-generation DNA Sequencing Technology
- (2015) Yanxiao Feng et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- Analysis of novel kitasatosporae reveals significant evolutionary changes in conserved developmental genes between Kitasatospora and Streptomyces
- (2014) Geneviève Girard et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Streptomyces leeuwenhoekii sp. nov., the producer of chaxalactins and chaxamycins, forms a distinct branch in Streptomyces gene trees
- (2014) Kanungnid Busarakam et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Insights into naturally minimised Streptomyces albus J1074 genome
- (2014) Nestor Zaburannyi et al. BMC GENOMICS
- Direct Capture and Heterologous Expression of Salinispora Natural Product Genes for the Biosynthesis of Enterocin
- (2014) Bailey Bonet et al. JOURNAL OF NATURAL PRODUCTS
- Natural Products from Mangrove Actinomycetes
- (2014) Dong-Bo Xu et al. Marine Drugs
- Recently publishedStreptomycesgenome sequences
- (2014) James Harrison et al. Microbial Biotechnology
- Genetic Basis for the Biosynthesis of the Pharmaceutically Important Class of Epoxyketone Proteasome Inhibitors
- (2013) Michelle Schorn et al. ACS Chemical Biology
- Comparative genomics of actinomycetes with a focus on natural product biosynthetic genes
- (2013) James R Doroghazi et al. BMC GENOMICS
- Identification and Characterization of the Cuevaene A Biosynthetic Gene Cluster inStreptomycessp. LZ35
- (2013) Yuhai Jiang et al. CHEMBIOCHEM
- Design-based re-engineering of biosynthetic gene clusters: plug-and-play in practice
- (2013) Hans-Jörg Frasch et al. CURRENT OPINION IN BIOTECHNOLOGY
- The Genome Sequence of Streptomyces lividans 66 Reveals a Novel tRNA-Dependent Peptide Biosynthetic System within a Metal-Related Genomic Island
- (2013) Pablo Cruz-Morales et al. Genome Biology and Evolution
- Cloning and Analysis of the Planosporicin Lantibiotic Biosynthetic Gene Cluster of Planomonospora alba
- (2013) E. J. Sherwood et al. JOURNAL OF BACTERIOLOGY
- Exploitation of the Streptomyces coelicolor A3(2) genome sequence for discovery of new natural products and biosynthetic pathways
- (2013) Gregory L. Challis JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Heterologous expression of natural product biosynthetic gene clusters in Streptomyces coelicolor: from genome mining to manipulation of biosynthetic pathways
- (2013) Juan Pablo Gomez-Escribano et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Recent Advances in the Discovery and Development of Marine Microbial Natural Products
- (2013) Zhi-Qiang Xiong et al. Marine Drugs
- Pharmaceutically active secondary metabolites of marine actinobacteria
- (2013) Panchanathan Manivasagan et al. MICROBIOLOGICAL RESEARCH
- Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
- (2013) Chen-Shan Chin et al. NATURE METHODS
- PATRIC, the bacterial bioinformatics database and analysis resource
- (2013) Alice R. Wattam et al. NUCLEIC ACIDS RESEARCH
- Shining a Light on Dark Sequencing: Characterising Errors in Ion Torrent PGM Data
- (2013) Lauren M. Bragg et al. PLoS Computational Biology
- Genomic and transcriptomic insights into the thermo-regulated biosynthesis of validamycin in Streptomyces hygroscopicus 5008
- (2012) Hang Wu et al. BMC GENOMICS
- A tale of three next generation sequencing platforms: comparison of Ion torrent, pacific biosciences and illumina MiSeq sequencers
- (2012) Michael Quail et al. BMC GENOMICS
- Performance comparison of benchtop high-throughput sequencing platforms
- (2012) Nicholas J Loman et al. NATURE BIOTECHNOLOGY
- Hybrid error correction and de novo assembly of single-molecule sequencing reads
- (2012) Sergey Koren et al. NATURE BIOTECHNOLOGY
- Posttranslational β-methylation and macrolactamidination in the biosynthesis of the bottromycin complex of ribosomal peptide antibiotics
- (2012) Juan Pablo Gomez-Escribano et al. Chemical Science
- Bio-mining the microbial treasures of the ocean: New natural products
- (2011) Johannes F. Imhoff et al. BIOTECHNOLOGY ADVANCES
- Biosynthesis and Regulation of Grisemycin, a New Member of the Linaridin Family of Ribosomally Synthesized Peptides Produced by Streptomyces griseus IFO 13350
- (2011) J. Claesen et al. JOURNAL OF BACTERIOLOGY
- Sequence-specific error profile of Illumina sequencers
- (2011) Kensuke Nakamura et al. NUCLEIC ACIDS RESEARCH
- Identification of a bioactive 51-membered macrolide complex by activation of a silent polyketide synthase in Streptomyces ambofaciens
- (2011) L. Laureti et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Approaches to Capturing and Designing Biologically Active Small Molecules Produced by Uncultured Microbes
- (2010) Jörn Piel Annual Review of Microbiology
- Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technology
- (2010) Thomas D. Otto et al. BIOINFORMATICS
- A window into third-generation sequencing
- (2010) E. E. Schadt et al. HUMAN MOLECULAR GENETICS
- Marine Metagenomics: New Tools for the Study and Exploitation of Marine Microbial Metabolism
- (2010) Jonathan Kennedy et al. Marine Drugs
- Immense Essence of Excellence: Marine Microbial Bioactive Compounds
- (2010) Ira Bhatnagar et al. Marine Drugs
- SBSPKS: structure based sequence analysis of polyketide synthases
- (2010) Swadha Anand et al. NUCLEIC ACIDS RESEARCH
- Genome mining and genetic analysis of cypemycin biosynthesis reveal an unusual class of posttranslationally modified peptides
- (2010) J. Claesen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Microbisporicin gene cluster reveals unusual features of lantibiotic biosynthesis in actinomycetes
- (2010) L. C. Foulston et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Dissecting tunicamycin biosynthesis by genome mining: cloning and heterologous expression of a minimal gene cluster
- (2010) Filip J. Wyszynski et al. Chemical Science
- Engineering Streptomyces coelicolor for heterologous expression of secondary metabolite gene clusters
- (2010) Juan Pablo Gomez-Escribano et al. Microbial Biotechnology
- Computational Biology Methods and Their Application to the Comparative Genomics of Endocellular Symbiotic Bacteria of Insects
- (2009) Jennifer Commins et al. BIOLOGICAL PROCEDURES ONLINE
- Strategies for the Discovery of New Natural Products by Genome Mining
- (2009) Malek Zerikly et al. CHEMBIOCHEM
- Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes
- (2009) Iwanka Kozarewa et al. NATURE METHODS
- Renaissance in antibacterial discovery from actinomycetes
- (2008) R BALTZ CURRENT OPINION IN PHARMACOLOGY
- Genome Sequence of the Streptomycin-Producing Microorganism Streptomyces griseus IFO 13350
- (2008) Y. Ohnishi et al. JOURNAL OF BACTERIOLOGY
- Accurate whole human genome sequencing using reversible terminator chemistry
- (2008) David R. Bentley et al. NATURE
- Real-Time DNA Sequencing from Single Polymerase Molecules
- (2008) J. Eid et al. SCIENCE
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