标题
The moonlighting of RAD23 in DNA repair and protein degradation
作者
关键词
-
出版物
Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
Volume 1866, Issue 2, Pages 194925
出版商
Elsevier BV
发表日期
2023-03-01
DOI
10.1016/j.bbagrm.2023.194925
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- The Ufd1 cofactor determines the linkage specificity of polyubiquitin chain engagement by the AAA+ ATPase Cdc48
- (2023) Cameron Williams et al. MOLECULAR CELL
- Mechanistic insights into enhancement or inhibition of phase separation by different polyubiquitin chains
- (2022) Thuy P Dao et al. EMBO REPORTS
- Polyubiquitin and ubiquitin-like signals share common recognition sites on proteasomal subunit Rpn1
- (2021) Andrew J. Boughton et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- The STI1‐domain is a flexible alpha‐helical fold with a hydrophobic groove
- (2021) Michelle Y. Fry et al. PROTEIN SCIENCE
- The cryo-EM structure of an ERAD protein channel formed by tetrameric human Derlin-1
- (2021) Bing Rao et al. Science Advances
- Proteasome in action: substrate degradation by the 26S proteasome
- (2021) Indrajit Sahu et al. BIOCHEMICAL SOCIETY TRANSACTIONS
- Dual proteome-scale networks reveal cell-specific remodeling of the human interactome
- (2021) Edward L. Huttlin et al. CELL
- Timely upstream events regulating nucleotide excision repair by ubiquitin-proteasome system: ubiquitin guides the way
- (2021) Anil K. Chauhan et al. DNA REPAIR
- Transcription-coupled nucleotide excision repair: New insights revealed by genomic approaches
- (2021) Mingrui Duan et al. DNA REPAIR
- A novel recognition site for polyubiquitin and ubiquitin-like signals in an unexpected region of proteasomal subunit Rpn1
- (2021) Andrew J. Boughton et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Highly accurate protein structure prediction with AlphaFold
- (2021) John Jumper et al. NATURE
- Previously uncharacterized interactions between the folded and intrinsically disordered domains impart asymmetric effects on UBQLN2 phase separation
- (2021) Tongyin Zheng et al. PROTEIN SCIENCE
- Cryo-EM structure of TFIIH/Rad4–Rad23–Rad33 in damaged DNA opening in nucleotide excision repair
- (2021) Trevor van Eeuwen et al. Nature Communications
- Mechanisms That Activate 26S Proteasomes and Enhance Protein Degradation
- (2021) Alfred L. Goldberg et al. Biomolecules
- Translocation of polyubiquitinated protein substrates by the hexameric Cdc48 ATPase
- (2021) Zhejian Ji et al. MOLECULAR CELL
- AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models
- (2021) Mihaly Varadi et al. NUCLEIC ACIDS RESEARCH
- The Cellular Location of Rad23, a Polyubiquitin Chain-Binding Protein, Plays a Key Role in its Interaction with Substrates of the Proteasome
- (2020) Evelyn Okeke et al. JOURNAL OF MOLECULAR BIOLOGY
- Stress- and ubiquitylation-dependent phase separation of the proteasome
- (2020) Sayaka Yasuda et al. NATURE
- Proteins containing ubiquitin-like (Ubl) domains not only bind to 26S proteasomes but also induce their activation
- (2020) Galen A. Collins et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Arabidopsis RAD23B regulates pollen development by mediating degradation of KRP1
- (2020) Lan Li et al. JOURNAL OF EXPERIMENTAL BOTANY
- Characterization of the CsPNG1 gene from cucumber and its function in response to salinity stress
- (2020) Kun Hou et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
- Structure, dynamics and functions of UBQLNs: at the crossroads of protein quality control machinery
- (2020) Tongyin Zheng et al. BIOCHEMICAL JOURNAL
- ER-associated Protein Degradation at Atomic Resolution
- (2020) Mohamed A. Eldeeb et al. TRENDS IN BIOCHEMICAL SCIENCES
- Mechanisms of substrate recognition by the 26S proteasome
- (2020) Caroline Davis et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Structure of hRpn10 Bound to UBQLN2 UBL Illustrates Basis for Complementarity between Shuttle Factors and Substrates at the Proteasome
- (2019) Xiang Chen et al. JOURNAL OF MOLECULAR BIOLOGY
- Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations
- (2019) Zhanyu Ding et al. MOLECULAR CELL
- The 26S Proteasome Utilizes a Kinetic Gateway to Prioritize Substrate Degradation
- (2019) Jared A.M. Bard et al. CELL
- Structure and mechanism of pyrimidine–pyrimidone (6-4) photoproduct recognition by the Rad4/XPC nucleotide excision repair complex
- (2019) Debamita Paul et al. NUCLEIC ACIDS RESEARCH
- Protein quality control in the secretory pathway
- (2019) Zhihao Sun et al. JOURNAL OF CELL BIOLOGY
- Towards a model of GCN2 activation
- (2019) Glenn R. Masson BIOCHEMICAL SOCIETY TRANSACTIONS
- Ubiquitin receptors are required for substrate-mediated activation of the proteasome’s unfolding ability
- (2019) Mary D. Cundiff et al. Scientific Reports
- Structure and Function of the 26S Proteasome
- (2018) Jared A.M. Bard et al. Annual Review of Biochemistry
- Protein Quality Control of the Endoplasmic Reticulum and Ubiquitin–Proteasome-Triggered Degradation of Aberrant Proteins: Yeast Pioneers the Path
- (2018) Nicole Berner et al. Annual Review of Biochemistry
- PolyQ-expanded huntingtin and ataxin-3 sequester ubiquitin adaptors hHR23B and UBQLN2 into aggregates via conjugated ubiquitin
- (2018) Hui Yang et al. FASEB JOURNAL
- Modulation of the secretory pathway by amino-acid starvation
- (2018) Wessel van Leeuwen et al. JOURNAL OF CELL BIOLOGY
- Ubiquitin Modulates Liquid-Liquid Phase Separation of UBQLN2 via Disruption of Multivalent Interactions
- (2018) Thuy P. Dao et al. MOLECULAR CELL
- Phosphorylation of xeroderma pigmentosum group C regulates ultraviolet-induced DNA damage repair
- (2018) Palak Shah et al. NUCLEIC ACIDS RESEARCH
- UFD-2 is an adaptor-assisted E3 ligase targeting unfolded proteins
- (2018) Doris Hellerschmied et al. Nature Communications
- UBL domain of Usp14 and other proteins stimulates proteasome activities and protein degradation in cells
- (2018) Hyoung Tae Kim et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Two mammalian homologs of yeast Rad23, HR23A and HR23B, as multifunctional proteins
- (2017) Masayuki Yokoi et al. GENE
- Interaction of the polyglutamine protein ataxin-3 with Rad23 regulates toxicity in Drosophila models of Spinocerebellar Ataxia Type 3
- (2017) Joanna R. Sutton et al. HUMAN MOLECULAR GENETICS
- The STI and UBA Domains of UBQLN1 Are Critical Determinants of Substrate Interaction and Proteostasis
- (2017) Zimple Kurlawala et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- In Vivo Ubiquitin Linkage-type Analysis Reveals that the Cdc48-Rad23/Dsk2 Axis Contributes to K48-Linked Chain Specificity of the Proteasome
- (2017) Hikaru Tsuchiya et al. MOLECULAR CELL
- Architecture of the human interactome defines protein communities and disease networks
- (2017) Edward L. Huttlin et al. NATURE
- Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3
- (2017) Stefan Schoebel et al. NATURE
- UBL/BAG-domain co-chaperones cause cellular stress upon overexpression through constitutive activation of Hsf1
- (2016) Esben G. Poulsen et al. CELL STRESS & CHAPERONES
- Ubiquitin‐like domains can target to the proteasome but proteolysis requires a disordered region
- (2016) Houqing Yu et al. EMBO JOURNAL
- Conserved Sequence Preferences Contribute to Substrate Recognition by the Proteasome
- (2016) Houqing Yu et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Nucleotide Excision Repair: Finely Tuned Molecular Orchestra of Early Pre-incision Events
- (2016) Qianzheng Zhu et al. PHOTOCHEMISTRY AND PHOTOBIOLOGY
- Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome
- (2016) Y. Shi et al. SCIENCE
- Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome
- (2016) Xiang Chen et al. STRUCTURE
- Gates, Channels, and Switches: Elements of the Proteasome Machine
- (2016) Daniel Finley et al. TRENDS IN BIOCHEMICAL SCIENCES
- Global-genome Nucleotide Excision Repair Controlled by Ubiquitin/Sumo Modifiers
- (2016) Peter Rüthemann et al. Frontiers in Genetics
- Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family
- (2016) Jean-François Trempe et al. Scientific Reports
- Recognition of Damaged DNA for Nucleotide Excision Repair: A Correlated Motion Mechanism with a Mismatched cis-syn Thymine Dimer Lesion
- (2015) Hong Mu et al. BIOCHEMISTRY
- Nucleosome positioning, nucleotide excision repair and photoreactivation in Saccharomyces cerevisiae
- (2015) Laetitia Guintini et al. DNA REPAIR
- XPC: Going where no DNA damage sensor has gone before
- (2015) Leah Nemzow et al. DNA REPAIR
- Sequence composition of disordered regions fine-tunes protein half-life
- (2015) Susan Fishbain et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The deubiquitinase ataxin-3 requires Rad23 and DnaJ-1 for its neuroprotective role in Drosophila melanogaster
- (2015) Wei-Ling Tsou et al. NEUROBIOLOGY OF DISEASE
- Architecture of the human XPC DNA repair and stem cell coactivator complex
- (2015) Elisa T. Zhang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- SUMO and ubiquitin-dependent XPC exchange drives nucleotide excision repair
- (2015) Loes van Cuijk et al. Nature Communications
- Sequence composition of disordered regions fine-tunes protein half-life
- (2015) Susan Fishbain et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Rad23 Interaction with the Proteasome Is Regulated by Phosphorylation of Its Ubiquitin-Like (UbL) Domain
- (2014) Ruei-Yue Liang et al. JOURNAL OF MOLECULAR BIOLOGY
- Dss1 Is a 26S Proteasome Ubiquitin Receptor
- (2014) Konstantinos Paraskevopoulos et al. MOLECULAR CELL
- Ubiquitin-binding site 2 of ataxin-3 prevents its proteasomal degradation by interacting with Rad23
- (2014) Jessica R. Blount et al. Nature Communications
- Human and yeast DNA damage recognition complexes bind with high affinity DNA structures mimicking in size transcription bubble
- (2013) Yuliya S. Krasikova et al. JOURNAL OF MOLECULAR RECOGNITION
- XPC promotes MDM2-mediated degradation of the p53 tumor suppressor
- (2013) Jing Yan Krzeszinski et al. MOLECULAR BIOLOGY OF THE CELL
- Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation
- (2013) Danielle L Swaney et al. NATURE METHODS
- Structure-function analysis of the EF-hand protein centrin-2 for its intracellular localization and nucleotide excision repair
- (2013) R. Nishi et al. NUCLEIC ACIDS RESEARCH
- Calcium-Binding Capacity of Centrin2 Is Required for Linear POC5 Assembly but Not for Nucleotide Excision Repair
- (2013) Tiago J. Dantas et al. PLoS One
- The Ubiquitin Code
- (2012) David Komander et al. Annual Review of Biochemistry
- NMR characterization of the interaction between the PUB domain of peptide:N-glycanase and ubiquitin-like domain of HR23
- (2012) Yukiko Kamiya et al. FEBS LETTERS
- The Ubiquitin-Proteasome System of Saccharomyces cerevisiae
- (2012) D. Finley et al. GENETICS
- Rpn1 and Rpn2 Coordinate Ubiquitin Processing Factors at Proteasome
- (2012) Rina Rosenzweig et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Recognition of DNA damage by XPC coincides with disruption of the XPC–RAD23 complex
- (2012) Steven Bergink et al. JOURNAL OF CELL BIOLOGY
- Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy
- (2012) E. Sakata et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Endoplasmic Reticulum-Associated Degradation Pathways of Budding Yeast
- (2012) G. Thibault et al. Cold Spring Harbor Perspectives in Biology
- Regulation of nucleotide excision repair through ubiquitination
- (2011) J. Li et al. ACTA BIOCHIMICA ET BIOPHYSICA SINICA
- The Molecular Basis of CRL4DDB2/CSA Ubiquitin Ligase Architecture, Targeting, and Activation
- (2011) Eric S. Fischer et al. CELL
- Defective nucleotide excision repair with normal centrosome structures and functions in the absence of all vertebrate centrins
- (2011) Tiago J. Dantas et al. JOURNAL OF CELL BIOLOGY
- Defining the geometry of the two-component proteasome degron
- (2011) Tomonao Inobe et al. Nature Chemical Biology
- The Cdc48 ATPase modulates the interaction between two proteolytic factors Ufd2 and Rad23
- (2011) G. H. Baek et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Road to Ruin: Targeting Proteins for Degradation in the Endoplasmic Reticulum
- (2011) M. H. Smith et al. SCIENCE
- C-terminal UBA domains protect ubiquitin receptors by preventing initiation of protein degradation
- (2011) Christian Heinen et al. Nature Communications
- Regulation of Nucleotide Excision Repair by UV-DDB: Prioritization of Damage Recognition to Internucleosomal DNA
- (2011) Jia Fei et al. PLOS BIOLOGY
- Moonlighting proteins: An intriguing mode of multitasking
- (2010) Daphne H.E.W. Huberts et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH
- The Yeast E4 Ubiquitin Ligase Ufd2 Interacts with the Ubiquitin-like Domains of Rad23 and Dsk2 via a Novel and Distinct Ubiquitin-like Binding Domain
- (2010) Petra Hänzelmann et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- DDB2 Complex-Mediated Ubiquitylation around DNA Damage Is Oppositely Regulated by XPC and Ku and Contributes to the Recruitment of XPA
- (2010) Arato Takedachi et al. MOLECULAR AND CELLULAR BIOLOGY
- Monoubiquitination of RPN10 Regulates Substrate Recruitment to the Proteasome
- (2010) Marta Isasa et al. MOLECULAR CELL
- The RAD23 Family Provides an Essential Connection between the 26S Proteasome and Ubiquitylated Proteins in Arabidopsis
- (2010) L. M. Farmer et al. PLANT CELL
- RING Domain E3 Ubiquitin Ligases
- (2009) Raymond J. Deshaies et al. Annual Review of Biochemistry
- Recognition and Processing of Ubiquitin-Protein Conjugates by the Proteasome
- (2009) Daniel Finley Annual Review of Biochemistry
- Isolation of Mammalian 26S Proteasomes and p97/VCP Complexes Using the Ubiquitin-like Domain from HHR23B Reveals Novel Proteasome-Associated Proteins†
- (2009) Henrike C. Besche et al. BIOCHEMISTRY
- Ubiquitin-like and ubiquitin-associated domain proteins: significance in proteasomal degradation
- (2009) Vivian Su et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- The ubiquitin receptor Rad23: At the crossroads of nucleotide excision repair and proteasomal degradation
- (2009) Nico P. Dantuma et al. DNA REPAIR
- Two-stage dynamic DNA quality check by xeroderma pigmentosum group C protein
- (2009) Ulrike Camenisch et al. EMBO JOURNAL
- New ATPase regulators—p97 goes to the PUB
- (2009) Louise Madsen et al. INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY
- Rad4 Regulates Protein Turnover at a Postubiquitylation Step
- (2009) Yue Li et al. MOLECULAR BIOLOGY OF THE CELL
- Together, Rpn10 and Dsk2 Can Serve as a Polyubiquitin Chain-Length Sensor
- (2009) Daoning Zhang et al. MOLECULAR CELL
- CRL4s: the CUL4-RING E3 ubiquitin ligases
- (2009) Sarah Jackson et al. TRENDS IN BIOCHEMICAL SCIENCES
- Components of the ubiquitin-proteasome pathway compete for surfaces on Rad23 family proteins
- (2008) Amanda M Goh et al. BMC BIOCHEMISTRY
- The Cullin 4B-Based UV-Damaged DNA-Binding Protein Ligase Binds to UV-Damaged Chromatin and Ubiquitinates Histone H2A
- (2008) J. Guerrero-Santoro et al. CANCER RESEARCH
- Structural Basis of UV DNA-Damage Recognition by the DDB1–DDB2 Complex
- (2008) Andrea Scrima et al. CELL
- Rtt101 and Mms1 in budding yeast form a CUL4DDB1-like ubiquitin ligase that promotes replication through damaged DNA
- (2008) Iram Waris Zaidi et al. EMBO REPORTS
- Extraproteasomal Rpn10 Restricts Access of the Polyubiquitin-Binding Protein Dsk2 to Proteasome
- (2008) Yulia Matiuhin et al. MOLECULAR CELL
- Proteasome subunit Rpn13 is a novel ubiquitin receptor
- (2008) Koraljka Husnjak et al. NATURE
- A quantitative atlas of mitotic phosphorylation
- (2008) N. Dephoure et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mutations in the Hydrophobic Core of Ubiquitin Differentially Affect Its Recognition by Receptor Proteins
- (2007) Aydin Haririnia et al. JOURNAL OF MOLECULAR BIOLOGY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started