The Role and Activity of SWI/SNF Chromatin Remodelers

The SWI/SNF subunit BRG1 affects alternative splicing by changing RNA binding factor interactions with nascent RNA

(2022) Antoni Gañez-Zapater et al.   MOLECULAR GENETICS AND GENOMICS

Brahma safeguards canalization of cardiac mesoderm differentiation

(2022) Swetansu K. Hota et al.   NATURE

SWI/SNF senses carbon starvation with a pH-sensitive low complexity sequence

(2022) J Ignacio Gutierrez et al.   eLife

Structure of human chromatin-remodelling PBAF complex bound to a nucleosome

(2022) Junjie Yuan et al.   NATURE

SWI2/SNF2 chromatin remodeling ATPases SPLAYED and BRAHMA control embryo development in rice

(2022) Qian Xun et al.   PLANT CELL REPORTS

SMARCE1 deficiency generates a targetable mSWI/SNF dependency in clear cell meningioma

(2022) Roodolph St. Pierre et al.   NATURE GENETICS

Comprehensive identification of SWI/SNF complex subunits underpins deep eukaryotic ancestry and reveals new plant components

(2022) Jorge Hernández-García et al.   Communications Biology

The TRIPLE PHD FINGERS proteins are required for SWI/SNF complex-mediated +1 nucleosome positioning and transcription start site determination in Arabidopsis

(2022) Borja Diego-Martin et al.   NUCLEIC ACIDS RESEARCH

Genome‐wide occupancy of Arabidopsis SWI/SNF chromatin remodeler SPLAYED provides insights into its interplay with its close homolog BRAHMA and Polycomb proteins

(2021) Jie Shu et al.   PLANT JOURNAL

LEAFY is a pioneer transcription factor and licenses cell reprogramming to floral fate

(2021) Run Jin et al.   Nature Communications

The chromatin-remodeling protein BAF60/SWP73A regulates the plant immune receptor NLRs

(2021) Chien-Yu Huang et al.   Cell Host & Microbe

The LEAFY floral regulator displays pioneer transcription factor properties

(2021) Xuelei Lai et al.   Molecular Plant

Acute BAF perturbation causes immediate changes in chromatin accessibility

(2021) Sandra Schick et al.   NATURE GENETICS

Mammalian SWI/SNF continuously restores local accessibility to chromatin

(2021) Mario Iurlaro et al.   NATURE GENETICS

BAF57/SMARCE1 Interacting with Splicing Factor SRSF1 Regulates Mechanical Stress-Induced Alternative Splicing of Cyclin D1

(2021) Jianguo Feng et al.   Genes

Bromodomain-containing Proteins BRD1, BRD2, and BRD13 are Core Subunits of SWI/SNF Complexes and are Vital for their Genomic Targeting in Arabidopsis

(2021) Yaoguang Yu et al.   Molecular Plant

ARID1A regulates R-loop associated DNA replication stress

(2021) Shuhe Tsai et al.   PLoS Genetics

The Chromatin Remodeling ATPase BRAHMA Interacts with the GATA-family Transcription Factor GNC to Regulate Flowering Time in Arabidopsis

(2021) Jie Yang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Nascent RNA antagonizes the interaction of a set of regulatory proteins with chromatin

(2021) Lenka Skalska et al.   MOLECULAR CELL

mSWI/SNF promotes Polycomb repression both directly and through genome-wide redistribution

(2021) Christopher M. Weber et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Bromodomain containing 9 (BRD9) regulates macrophage inflammatory responses by potentiating glucocorticoid receptor activity

(2021) Liu Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

FUS oncofusion protein condensates recruit mSWI/SNF chromatin remodeler via heterotypic interactions between prion‐like domains

(2021) Richoo B. Davis et al.   PROTEIN SCIENCE

Chromatin landscape signals differentially dictate the activities of mSWI/SNF family complexes

(2021) Nazar Mashtalir et al.   SCIENCE

LFR Physically and Genetically Interacts With SWI/SNF Component SWI3B to Regulate Leaf Blade Development in Arabidopsis

(2021) Xiaowei Lin et al.   Frontiers in Plant Science

Plant transcription factors — being in the right place with the right company

(2021) Lucia Strader et al.   CURRENT OPINION IN PLANT BIOLOGY

Acute depletion of the ARID1A subunit of SWI/SNF complexes reveals distinct pathways for activation and repression of transcription

(2021) Seraina Blümli et al.   Cell Reports

The SWI/SNF ATP-Dependent Chromatin Remodeling Complex in Arabidopsis Responds to Environmental Changes in Temperature-Dependent Manner

(2020) Dominika M. Gratkowska-Zmuda et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

CK2-Dependent Phosphorylation of the Brg1 Chromatin Remodeling Enzyme Occurs during Mitosis

(2020) Teresita Padilla-Benavides et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Structure of nucleosome-bound human BAF complex

(2020) Shuang He et al.   SCIENCE

Unwinding BRAHMA Functions in Plants

(2020) Caroline Thouly et al.   Genes

Cryo-EM structure of SWI/SNF complex bound to a nucleosome

(2020) Yan Han et al.   NATURE

Structure of SWI/SNF chromatin remodeller RSC bound to a nucleosome

(2020) Felix R. Wagner et al.   NATURE

Structure of the yeast Swi/Snf complex in a nucleosome free state

(2020) Chengcheng Wang et al.   Nature Communications

Regulation of the Mammalian SWI/SNF Family of Chromatin Remodeling Enzymes by Phosphorylation during Myogenesis

(2020) Teresita Padilla-Benavides et al.   Biology-Basel

Non-Coding RNAs and Nucleosome Remodeling Complexes: An Intricate Regulatory Relationship

(2020) Benjamin J. Patty et al.   Biology-Basel

Pioneer Transcription Factors Initiating Gene Network Changes

(2020) Kenneth S. Zaret   Annual Review of Genetics

Genome-wide CRISPR screens reveal host factors critical for SARS-CoV-2 infection

(2020) Jin Wei et al.   CELL

The SWI/SNF ATPase BRG1 stimulates DNA end resection and homologous recombination by reducing nucleosome density at DNA double strand breaks and by promoting the recruitment of the CtIP nuclease

(2020) Emily Hays et al.   CELL CYCLE

OsLFR is essential for early endosperm and embryo development by interacting with SWI/SNF complex members in Oryza sativa

(2020) Dongmei Qi et al.   PLANT JOURNAL

Pioneer-like factor GAF cooperates with PBAP (SWI/SNF) and NURF (ISWI) to regulate transcription

(2020) Julius Judd et al.   GENES & DEVELOPMENT

Structural insights into assembly and function of the RSC chromatin remodeling complex

(2020) Richard W. Baker et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Elucidating the regulatory mechanism of Swi1 prion in global transcription and stress responses

(2020) Zhiqiang Du et al.   Scientific Reports

RNA Sequencing Reveals Specific Transcriptomic Signatures Distinguishing Effects of the [SWI+] Prion and SWI1 Deletion in Yeast Saccharomyces cerevisiae

(2019) Yury V. Malovichko et al.   Genes

Profiling of Pluripotency Factors in Single Cells and Early Embryos

(2019) Sarah J. Hainer et al.   CELL

SWI/SNF: Complex complexes in genome stability and cancer

(2019) Cristina Ribeiro-Silva et al.   DNA REPAIR

Integration of transcriptional repression and Polycomb-mediated silencing of WUSCHEL in floral meristems

(2019) Bo Sun et al.   PLANT CELL

Floral regulators FLC and SOC1 directly regulate expression of the B3-type transcription factor TARGET OF FLC AND SVP 1 at the Arabidopsis shoot apex via antagonistic chromatin modifications

(2019) René Richter et al.   PLoS Genetics

A SWI/SNF subunit regulates chromosomal dissociation of structural maintenance complex 5 during DNA repair in plant cells

(2019) Jieming Jiang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Unwinding chromatin at the right places: how BAF is targeted to specific genomic locations during development

(2019) Patric J. Ho et al.   DEVELOPMENT

Opposing chromatin remodelers control transcription initiation frequency and start site selection

(2019) Slawomir Kubik et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Chromatin remodeling for the transcription of type 2C protein phosphatase genes in response to salt stress

(2019) Nguyen Hoai Nguyen et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Recurrent SMARCB1 Mutations Reveal a Nucleosome Acidic Patch Interaction Site That Potentiates mSWI/SNF Complex Chromatin Remodeling

(2019) Alfredo M. Valencia et al.   CELL

Nucleo-cytoplasmic Partitioning of ARF Proteins Controls Auxin Responses in Arabidopsis thaliana

(2019) Samantha K. Powers et al.   MOLECULAR CELL

Structure of the RSC complex bound to the nucleosome

(2019) Youpi Ye et al.   SCIENCE

The functional landscape of the human phosphoproteome

(2019) David Ochoa et al.   NATURE BIOTECHNOLOGY

SWI3B and HDA6 interact and are required for transposon silencing in Arabidopsis

(2019) Jie Yang et al.   PLANT JOURNAL

Architecture of the chromatin remodeler RSC and insights into its nucleosome engagement

(2019) Avinash B Patel et al.   eLife

Arabidopsis ARGONAUTE 1 Binds Chromatin to Promote Gene Transcription in Response to Hormones and Stresses

(2018) Chang Liu et al.   DEVELOPMENTAL CELL

Glioma tumor suppressor candidate region gene 1 (GLTSCR1) and its paralog GLTSCR1-like form SWI/SNF chromatin remodeling subcomplexes

(2018) Aktan Alpsoy et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Dynamics and function of DNA methylation in plants

(2018) Huiming Zhang et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

SWI/SNF interacts with cleavage and polyadenylation factors and facilitates pre-mRNA 3′ end processing

(2018) Simei Yu et al.   NUCLEIC ACIDS RESEARCH

LFR is functionally associated with AS2 to mediate leaf development in Arabidopsis

(2018) Xiaowei Lin et al.   PLANT JOURNAL

RNA/DNA Hybrid Interactome Identifies DXH9 as a Molecular Player in Transcriptional Termination and R-Loop-Associated DNA Damage

(2018) Agnese Cristini et al.   Cell Reports

The Tumor Suppressor ARID1A Controls Global Transcription via Pausing of RNA Polymerase II

(2018) Marco Trizzino et al.   Cell Reports

SWI2/SNF2 ATPase CHR2 remodels pri-miRNAs via Serrate to impede miRNA production

(2018) Zhiye Wang et al.   NATURE

Modular Organization and Assembly of SWI/SNF Family Chromatin Remodeling Complexes

(2018) Nazar Mashtalir et al.   CELL

Interactome mapping defines BRG1, a component of the SWI/SNF chromatin remodeling complex, as a new partner of the transcriptional regulator CTCF

(2018) Maria Michela Marino et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The SWI/SNF complex is a mechanoregulated inhibitor of YAP and TAZ

(2018) Lei Chang et al.   NATURE

A non-canonical SWI/SNF complex is a synthetic lethal target in cancers driven by BAF complex perturbation

(2018) Brittany C. Michel et al.   NATURE CELL BIOLOGY

The chromatin remodeler ZmCHB101 impacts alternative splicing contexts in response to osmotic stress

(2018) Xiaoming Yu et al.   PLANT CELL REPORTS

A non-canonical BRD9-containing BAF chromatin remodeling complex regulates naive pluripotency in mouse embryonic stem cells

(2018) Jovylyn Gatchalian et al.   Nature Communications

Proteasomal degradation of BRAHMA promotes Boron tolerance in Arabidopsis

(2018) Takuya Sakamoto et al.   Nature Communications

The SWI2/SNF2 Chromatin-Remodeling ATPase BRAHMA Regulates Chlorophyll Biosynthesis in Arabidopsis

(2017) Dong Zhang et al.   Molecular Plant

Mechanisms of action and regulation of ATP-dependent chromatin-remodelling complexes

(2017) Cedric R. Clapier et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The chromatin remodeling complex Swi/Snf regulates splicing of meiotic transcripts in Saccharomyces cerevisiae

(2017) Srivats Venkataramanan et al.   NUCLEIC ACIDS RESEARCH

A SUMO Ligase AtMMS21 Regulates the Stability of the Chromatin Remodeler BRAHMA in Root Development

(2017) Juanjuan Zhang et al.   PLANT PHYSIOLOGY

Histone-binding of DPF2 mediates its repressive role in myeloid differentiation

(2017) Ferdinand M. Huber et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide analysis of chromatin packing inArabidopsis thalianaat single-gene resolution

(2016) Chang Liu et al.   GENOME RESEARCH

SMARCA4 regulates gene expression and higher-order chromatin structure in proliferating mammary epithelial cells

(2016) A. Rasim Barutcu et al.   GENOME RESEARCH

A Direct Link between Abscisic Acid Sensing and the Chromatin-Remodeling ATPase BRAHMA via Core ABA Signaling Pathway Components

(2016) Marta Peirats-Llobet et al.   Molecular Plant

Smarca4 ATPase mutations disrupt direct eviction of PRC1 from chromatin

(2016) Benjamin Z Stanton et al.   NATURE GENETICS

Dynamics of BAF–Polycomb complex opposition on heterochromatin in normal and oncogenic states

(2016) Cigall Kadoch et al.   NATURE GENETICS

Concerted genomic targeting of H3K27 demethylase REF6 and chromatin-remodeling ATPase BRM in Arabidopsis

(2016) Chenlong Li et al.   NATURE GENETICS

HD2C histone deacetylase and a SWI/SNF chromatin remodelling complex interact and both are involved in mediating the heat stress response inArabidopsis

(2016) Daniel Buszewicz et al.   PLANT CELL AND ENVIRONMENT

Regulation of Vegetative Phase Change by SWI2/SNF2 Chromatin Remodeling ATPase BRAHMA

(2016) Yunmin Xu et al.   PLANT PHYSIOLOGY

Luminidependens (LD) is an Arabidopsis protein with prion behavior

(2016) Sohini Chakrabortee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Role of SWI/SNF Chromatin Remodeling Complexes in Hormone Crosstalk

(2016) Elzbieta Sarnowska et al.   TRENDS IN PLANT SCIENCE

Arabidopsis FORGETTER1 mediates stress-induced chromatin memory through nucleosome remodeling

(2016) Krzysztof Brzezinka et al.   eLife

AtEAF1 is a potential platform protein for Arabidopsis NuA4 acetyltransferase complex

(2015) Tomasz Bieluszewski et al.   BMC PLANT BIOLOGY

ARGONAUTE2 cooperates with SWI/SNF complex to determine nucleosome occupancy at human Transcription Start Sites

(2015) Claudia Carissimi et al.   NUCLEIC ACIDS RESEARCH

The Chromatin Remodeler SPLAYED Negatively Regulates SNC1-Mediated Immunity

(2015) Kaeli C.M. Johnson et al.   PLANT AND CELL PHYSIOLOGY

Dynamic Changes in ANGUSTIFOLIA3 Complex Composition Reveal a Growth Regulatory Mechanism in the Maize Leaf

(2015) Hilde Nelissen et al.   PLANT CELL

The Arabidopsis SWI2/SNF2 Chromatin Remodeling ATPase BRAHMA Targets Directly toPINsand Is Required for Root Stem Cell Niche Maintenance

(2015) Songguang Yang et al.   PLANT CELL

What Makes a Protein Sequence a Prion?

(2015) Raimon Sabate et al.   PLoS Computational Biology

The Arabidopsis SWI2/SNF2 Chromatin Remodeler BRAHMA Regulates Polycomb Function during Vegetative Development and Directly Activates the Flowering Repressor Gene SVP

(2015) Chenlong Li et al.   PLoS Genetics

Arabidopsis BREVIPEDICELLUS Interacts with the SWI2/SNF2 Chromatin Remodeling ATPase BRAHMA to Regulate KNAT2 and KNAT6 Expression in Control of Inflorescence Architecture

(2015) Minglei Zhao et al.   PLoS Genetics

Auxin-regulated chromatin switch directs acquisition of flower primordium founder fate

(2015) Miin-Feng Wu et al.   eLife

Chromatin versus pathogens: the function of epigenetics in plant immunity

(2015) Bo Ding et al.   Frontiers in Plant Science

Mammalian SWI/SNF chromatin remodeling complexes and cancer: Mechanistic insights gained from human genomics

(2015) C. Kadoch et al.   Science Advances

A SWI/SNF Chromatin Remodelling Protein Controls Cytokinin Production through the Regulation of Chromatin Architecture

(2015) Teddy Jégu et al.   PLoS One

The BAF60 Subunit of the SWI/SNF Chromatin-Remodeling Complex Directly Controls the Formation of a Gene Loop at FLOWERING LOCUS C in Arabidopsis

(2014) T. Jegu et al.   PLANT CELL

ANGUSTIFOLIA3 Binds to SWI/SNF Chromatin Remodeling Complexes to Regulate Transcription during Arabidopsis Leaf Development

(2014) L. Vercruyssen et al.   PLANT CELL

Transcriptional Regulation by Trithorax-Group Proteins

(2014) R. E. Kingston et al.   Cold Spring Harbor Perspectives in Biology

Regulation of Leaf Maturation by Chromatin-Mediated Modulation of Cytokinin Responses

(2013) Idan Efroni et al.   DEVELOPMENTAL CELL

DELLA-Interacting SWI3C Core Subunit of Switch/Sucrose Nonfermenting Chromatin Remodeling Complex Modulates Gibberellin Responses and Hormonal Cross Talk in Arabidopsis

(2013) E. A. Sarnowska et al.   PLANT PHYSIOLOGY

BRAHMA ATPase of the SWI/SNF Chromatin Remodeling Complex Acts as a Positive Regulator of Gibberellin-Mediated Responses in Arabidopsis

(2013) Rafal Archacki et al.   PLoS One

The SWI2/SNF2 Chromatin Remodeling ATPase BRAHMA Represses Abscisic Acid Responses in the Absence of the Stress Stimulus in Arabidopsis

(2012) S.-K. Han et al.   PLANT CELL

Mutations in two non-canonical Arabidopsis SWI2/SNF2 chromatin remodeling ATPases cause embryogenesis and stem cell maintenance defects

(2012) Yi Sang et al.   PLANT JOURNAL

SS18 Together with Animal-Specific Factors Defines Human BAF-Type SWI/SNF Complexes

(2012) Evelien Middeljans et al.   PLoS One

SWI2/SNF2 chromatin remodeling ATPases overcome polycomb repression and control floral organ identity with the LEAFY and SEPALLATA3 transcription factors

(2012) M.-F. Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development

(2012) C. Smaczniak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SWI/SNF regulates the alternative processing of a specific subset of pre-mRNAs in Drosophila melanogaster

(2011) Johan Waldholm et al.   BMC MOLECULAR BIOLOGY

Participation of Chromatin-Remodeling Proteins in the Repair of Ultraviolet-B-Damaged DNA

(2011) M. Campi et al.   PLANT PHYSIOLOGY

Brahma Is Required for Proper Expression of the Floral Repressor FLC in Arabidopsis

(2011) Sara Farrona et al.   PLoS One

Bap170, a Subunit of the Drosophila PBAP Chromatin Remodeling Complex, Negatively Regulates the EGFR Signaling

(2010) Rosaria Rendina et al.   GENETICS

Functional characterization of the HD-ZIP IV transcription factor OCL1 from maize

(2010) Nathalie Depège-Fargeix et al.   JOURNAL OF EXPERIMENTAL BOTANY

Chromatin remodelling during development

(2010) Lena Ho et al.   NATURE

Mechanism and regulation of acetylated histone binding by the tandem PHD finger of DPF3b

(2010) Lei Zeng et al.   NATURE

Genetic analysis of functional redundancy of BRM ATPase and ATSWI3C subunits of Arabidopsis SWI/SNF chromatin remodelling complexes

(2009) Rafal Archacki et al.   PLANTA

Brm transactivates the telomerase reverse transcriptase (TERT) gene and modulates the splicing patterns of its transcripts in concert with p54nrb

(2008) Taiji Ito et al.   BIOCHEMICAL JOURNAL

Histone Acetylation and Chromatin Remodeling Are Required for UV-B-Dependent Transcriptional Activation of Regulated Genes in Maize

(2008) P. Casati et al.   PLANT CELL

LFR, which encodes a novel nuclear-localized Armadillo-repeat protein, affects multiple developmental processes in the aerial organs in Arabidopsis

(2008) Zhijuan Wang et al.   PLANT MOLECULAR BIOLOGY

ES cell pluripotency and germ-layer formation require the SWI/SNF chromatin remodeling component BAF250a

(2008) X. Gao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Chromatin Remodeler SPLAYED Regulates Specific Stress Signaling Pathways

(2008) Justin W. Walley et al.   PLoS Pathogens