Westlake Gut Project: A consortium of microbiome epidemiology for the gut microbiome and health research in China

Gut Microbiome Composition Is Predictive of Incident Type 2 Diabetes in a Population Cohort of 5,572 Finnish Adults

(2022) Matti O. Ruuskanen et al.   DIABETES CARE

Mapping the human gut mycobiome in middle-aged and elderly adults: multiomics insights and implications for host metabolic health

(2022) Menglei Shuai et al.   GUT

Combined effects of host genetics and diet on human gut microbiota and incident disease in a single population cohort

(2022) Youwen Qin et al.   NATURE GENETICS

Environmental factors shaping the gut microbiome in a Dutch population

(2022) R. Gacesa et al.   NATURE

Large-scale association analyses identify host factors influencing human gut microbiome composition

(2021) Alexander Kurilshikov et al.   NATURE GENETICS

Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals

(2021) Francesco Asnicar et al.   NATURE MEDICINE

Plasma lipidomics in early pregnancy and risk of gestational diabetes mellitus: a prospective nested case–control study in Chinese women

(2021) Yi Wang et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Metabolically Abnormal But Normal-Weight Individuals Had a Higher Risk of Type 2 Diabetes Mellitus in a Cohort Study of a Chinese Population

(2021) Qiannan Chen et al.   Frontiers in Endocrinology

The Chinese Adolescent Cohort Study: Design, Implementation, and Major Findings

(2021) Ruonan Duan et al.   Frontiers in Nutrition

The effect of storage conditions on microbial communities in stool

(2020) Kristien Nel Van Zyl et al.   PLoS One

Population-level configurations of gut mycobiome across six ethnicities in urban and rural China

(2020) Yang Sun et al.   GASTROENTEROLOGY

Gut microbiota in human metabolic health and disease

(2020) Yong Fan et al.   NATURE REVIEWS MICROBIOLOGY

Health and disease markers correlate with gut microbiome composition across thousands of people

(2020) Ohad Manor et al.   Nature Communications

Interpretable Machine Learning Framework Reveals Robust Gut Microbiome Features Associated With Type 2 Diabetes

(2020) Wanglong Gou et al.   DIABETES CARE

Role of the microbiome in human development

(2019) Maria Gloria Dominguez-Bello et al.   GUT

A review of 10 years of human microbiome research activities at the US National Institutes of Health, Fiscal Years 2007-2016

(2019)   Microbiome

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

A comprehensive assessment of demographic, environmental, and host genetic associations with gut microbiome diversity in healthy individuals

(2019) Petar Scepanovic et al.   Microbiome

Sick Individuals and Sick (Microbial) Populations: Challenges in Epidemiology and the Microbiome

(2019) Audrey Renson et al.   Annual Review of Public Health

Current understanding of the human microbiome

(2018) Jack A Gilbert et al.   NATURE MEDICINE

American Gut: an Open Platform for Citizen Science Microbiome Research

(2018) Daniel McDonald et al.   mSystems

Environment dominates over host genetics in shaping human gut microbiota

(2018) Daphna Rothschild et al.   NATURE

Regional variation limits applications of healthy gut microbiome reference ranges and disease models

(2018) Yan He et al.   NATURE MEDICINE

Cohort Profile: The National FINRISK Study

(2017) Katja Borodulin et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY

Fungal microbiota dysbiosis in IBD

(2016) Harry Sokol et al.   GUT

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Population-level analysis of gut microbiome variation

(2016) Gwen Falony et al.   SCIENCE

Personalized Nutrition by Prediction of Glycemic Responses

(2015) David Zeevi et al.   CELL

Cohort profile: LifeLines DEEP, a prospective, general population cohort study in the northern Netherlands: study design and baseline characteristics

(2015) Ettje F Tigchelaar et al.   BMJ Open

The Effect of Sampling and Storage on the Fecal Microbiota Composition in Healthy and Diseased Subjects

(2015) Danyta I. Tedjo et al.   PLoS One

Association between dietary intake of flavonoid and bone mineral density in middle aged and elderly Chinese women and men

(2014) Z.-q. Zhang et al.   OSTEOPOROSIS INTERNATIONAL

Characterization of the Fecal Microbiota Using High-Throughput Sequencing Reveals a Stable Microbial Community during Storage

(2012) Ian M. Carroll et al.   PLoS One

Cohort Profile: The China Health and Nutrition Survey--monitoring and understanding socio-economic and health change in China, 1989-2011

(2009) B. M. Popkin et al.   INTERNATIONAL JOURNAL OF EPIDEMIOLOGY