Architecture of the yeast Pol III pre-termination complex and pausing mechanism on poly(dT) termination signals
出版年份 2022 全文链接
标题
Architecture of the yeast Pol III pre-termination complex and pausing mechanism on poly(dT) termination signals
作者
关键词
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出版物
Cell Reports
Volume 40, Issue 10, Pages 111316
出版商
Elsevier BV
发表日期
2022-09-06
DOI
10.1016/j.celrep.2022.111316
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- An integrated model for termination of RNA polymerase III transcription
- (2022) Juanjuan Xie et al. Science Advances
- Structure of human RNA polymerase III elongation complex
- (2021) Liang Li et al. CELL RESEARCH
- Structural insights into transcriptional regulation of human RNA polymerase III
- (2021) Qianmin Wang et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Cryo-EM structures of human RNA polymerase III in its unbound and transcribing states
- (2021) Mathias Girbig et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Structural insights into RNA polymerase III-mediated transcription termination through trapping poly-deoxythymidine
- (2021) Haifeng Hou et al. Nature Communications
- Mechanism of RNA polymerase III termination-associated reinitiation-recycling conferred by the essential function of the N terminal-and-linker domain of the C11 subunit
- (2021) Saurabh Mishra et al. Nature Communications
- Structural basis for RNA polymerase III transcription repression by Maf1
- (2020) Matthias K. Vorländer et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Structure of human RNA polymerase III
- (2020) Ewan Phillip Ramsay et al. Nature Communications
- Senataxin homologue Sen1 is required for efficient termination of RNA polymerase III transcription
- (2019) Julieta Rivosecchi et al. EMBO JOURNAL
- Namdinator – automatic molecular dynamics flexible fitting of structural models into cryo-EM and crystallography experimental maps
- (2019) Rune Thomas Kidmose et al. IUCrJ
- Progress towards the Tree of Eukaryotes
- (2019) Patrick J. Keeling et al. CURRENT BIOLOGY
- Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix
- (2019) Dorothee Liebschner et al. Acta Crystallographica Section D-Structural Biology
- Real-time cryo-electron microscopy data preprocessing with Warp
- (2019) Dimitry Tegunov et al. NATURE METHODS
- Current Developments in Coot for Macromolecular Model Building of Electron Cryo‐microscopy and Crystallographic Data
- (2019) Ana Casañal et al. PROTEIN SCIENCE
- High‐resolution transcription maps reveal the widespread impact of roadblock termination in yeast
- (2018) Tito Candelli et al. EMBO JOURNAL
- MonoRes: Automatic and Accurate Estimation of Local Resolution for Electron Microscopy Maps
- (2018) Jose Luis Vilas et al. STRUCTURE
- ISOLDE: a physically realistic environment for model building into low-resolution electron-density maps
- (2018) Tristan Ian Croll Acta Crystallographica Section D-Structural Biology
- Structural visualization of RNA polymerase III transcription machineries
- (2018) Yan Han et al. Cell Discovery
- Structural basis of RNA polymerase III transcription initiation
- (2018) Guillermo Abascal-Palacios et al. NATURE
- Molecular mechanism of promoter opening by RNA polymerase III
- (2018) Matthias K. Vorländer et al. NATURE
- General Regulatory Factors Control the Fidelity of Transcription by Restricting Non-coding and Ectopic Initiation
- (2018) Drice Challal et al. MOLECULAR CELL
- New tools for automated high-resolution cryo-EM structure determination in RELION-3
- (2018) Jasenko Zivanov et al. eLife
- MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy
- (2017) Shawn Q Zheng et al. NATURE METHODS
- cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination
- (2017) Ali Punjani et al. NATURE METHODS
- UCSF ChimeraX: Meeting modern challenges in visualization and analysis
- (2017) Thomas D. Goddard et al. PROTEIN SCIENCE
- Model-based local density sharpening of cryo-EM maps
- (2017) Arjen J Jakobi et al. eLife
- Global analysis of transcriptionally engaged yeast RNA polymerase III reveals extended tRNA transcripts
- (2016) Tomasz W. Turowski et al. GENOME RESEARCH
- Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy
- (2016) J.M. de la Rosa-Trevín et al. JOURNAL OF STRUCTURAL BIOLOGY
- Gctf: Real-time CTF determination and correction
- (2016) Kai Zhang JOURNAL OF STRUCTURAL BIOLOGY
- Molecular Structures of Transcribing RNA Polymerase I
- (2016) Lucas Tafur et al. MOLECULAR CELL
- deepTools2: a next generation web server for deep-sequencing data analysis
- (2016) Fidel Ramírez et al. NUCLEIC ACIDS RESEARCH
- Active Center Control of Termination by RNA Polymerase III and tRNA Gene Transcription Levels In Vivo
- (2016) Keshab Rijal et al. PLoS Genetics
- Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble
- (2015) Christopher O. Barnes et al. MOLECULAR CELL
- Mechanism of Transcription Termination by RNA Polymerase III Utilizes a Non-template Strand Sequence-Specific Signal Element
- (2015) Aneeshkumar G. Arimbasseri et al. MOLECULAR CELL
- Molecular structures of unbound and transcribing RNA polymerase III
- (2015) Niklas A. Hoffmann et al. NATURE
- Transcription termination and the control of the transcriptome: why, where and how to stop
- (2015) Odil Porrua et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- PAR-CLIP data indicate that Nrd1-Nab3-dependent transcription termination regulates expression of hundreds of protein coding genes in yeast
- (2014) Shaun Webb et al. GENOME BIOLOGY
- Distinguishing Core and Holoenzyme Mechanisms of Transcription Termination by RNA Polymerase III
- (2013) A. G. Arimbasseri et al. MOLECULAR AND CELLULAR BIOLOGY
- Collaboration gets the most out of software
- (2013) Andrew Morin et al. eLife
- Low-resolution refinement tools inREFMAC5
- (2012) Robert A. Nicholls et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- RNA polymerase III mutants in TFIIFα-like C37 that cause terminator readthrough with no decrease in transcription output
- (2012) Keshab Rijal et al. NUCLEIC ACIDS RESEARCH
- Structural basis of RNA polymerase II backtracking, arrest and reactivation
- (2011) Alan C. M. Cheung et al. NATURE
- Structure-function analysis of hRPC62 provides insights into RNA polymerase III transcription initiation
- (2011) Stéphane Lefèvre et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Point mutations in the Rpb9-homologous domain of Rpc11 that impair transcription termination by RNA polymerase III
- (2011) J. R. Iben et al. NUCLEIC ACIDS RESEARCH
- Features and development ofCoot
- (2010) P. Emsley et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Jalview Version 2--a multiple sequence alignment editor and analysis workbench
- (2009) A. M. Waterhouse et al. BIOINFORMATICS
- Transcription termination by nuclear RNA polymerases
- (2009) P. Richard et al. GENES & DEVELOPMENT
- The C53/C37 Subcomplex of RNA Polymerase III Lies Near the Active Site and Participates in Promoter Opening
- (2009) George A. Kassavetis et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Identification of protein binding sites on U3 snoRNA and pre-rRNA by UV cross-linking and high-throughput analysis of cDNAs
- (2009) S. Granneman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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