Antimicrobial resistance in Shiga toxin-producingEscherichia coliserogroups O157 and O26 isolated from human cases of diarrhoeal disease in England, 2015

Plasmid-mediated colistin resistance (mcr-1gene): three months later, the story unfolds

(2016) Robert L. Skov et al.   Eurosurveillance

Biofilm Formation, Virulence Gene Profiles, and Antimicrobial Resistance of Nine Serogroups of Non-O157 Shiga Toxin–ProducingEscherichia coli

(2016) Jiaying Wang et al.   Foodborne Pathogens and Disease

Detection of the plasmid-mediatedmcr-1gene conferring colistin resistance in human and food isolates ofSalmonella entericaandEscherichia coliin England and Wales

(2016) Michel Doumith et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study

(2016) Yi-Yun Liu et al.   LANCET INFECTIOUS DISEASES

Whole Genome Sequencing for Public Health Surveillance of Shiga Toxin-Producing Escherichia coli Other than Serogroup O157

(2016) Marie A. Chattaway et al.   Frontiers in Microbiology

Whole-Genome Sequencing for National Surveillance of Shiga Toxin–ProducingEscherichia coliO157

(2015) Timothy J. Dallman et al.   CLINICAL INFECTIOUS DISEASES

Cross-sectional survey of antibiotic resistance in Escherichia coli isolated from diseased farm livestock in England and Wales

(2015) T. E. A. CHENEY et al.   EPIDEMIOLOGY AND INFECTION

The epidemiology, microbiology and clinical impact of Shiga toxin-producing Escherichia coli in England, 2009–2012

(2015) L. BYRNE et al.   EPIDEMIOLOGY AND INFECTION

Molecular analysis of multidrug resistance in Shiga toxin-producing Escherichia coli O157:H7 isolated from meat and dairy products

(2015) Ashraf M. Ahmed et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

WGS accurately predicts antimicrobial resistance inEscherichia coli

(2015) Gregory H. Tyson et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study

(2015) Kate S Baker et al.   LANCET INFECTIOUS DISEASES

Genetic characterization of Shiga toxin-producing Escherichia coli O26:H11 strains isolated from animal, food, and clinical samples

(2015) Alejandra Krüger et al.   Frontiers in Cellular and Infection Microbiology

Epidemiology and microbiology of Shiga toxin-producing Escherichia coli other than serogroup O157 in England, 2009-2013

(2014) L. Byrne et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Predicting antimicrobial susceptibilities for Escherichia coli and Klebsiella pneumoniae isolates using whole genomic sequence data

(2013) N. Stoesser et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Molecular and Antimicrobial Susceptibility Analyses Distinguish Clinical from Bovine Escherichia coli O157 Strains

(2013) S. Vidovic et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Comparison of the Prevalences and Antimicrobial Resistances of Escherichia coli Isolates from Different Retail Meats in the United States, 2002 to 2008

(2012) S. Zhao et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing

(2012) E. Zankari et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Assessment of a real-time PCR for the detection and characterization of verocytotoxigenic Escherichia coli

(2012) C. Jenkins et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Gene Cluster Conferring Streptomycin, Sulfonamide, and Tetracycline Resistance inEscherichia coliO157:H7 Phage Types 23, 45, and 67

(2011) K. Ziebell et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

CTX-M-15 Extended-Spectrum β-Lactamase in a Shiga Toxin-Producing Escherichia coli Isolate of Serotype O111:H8

(2011) Charlotte Valat et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Multidrug-resistant, extensively drug-resistant and pandrug-resistant bacteria: an international expert proposal for interim standard definitions for acquired resistance

(2011) A.-P. Magiorakos et al.   CLINICAL MICROBIOLOGY AND INFECTION

Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology

(2011) Alexander Mellmann et al.   PLoS One

Characterization of antimicrobial resistance and seasonal prevalence ofEscherichia coliO157:H7 recovered from commercial feedlots in Alberta, Canada

(2010) M. Aslam et al.   LETTERS IN APPLIED MICROBIOLOGY