Long-read RNA sequencing of Pacific abalone Haliotis discus hannai reveals innate immune system responses to environmental stress

Transcriptomic Response of Mussel Gills After a Vibrio splendidus Infection Demonstrates Their Role in the Immune Response

(2021) Amaro Saco et al.   Frontiers in Immunology

Single-molecule long-read (SMRT) transcriptome sequencing of Mercenaria mercenaria reveals a powerful anti-apoptotic system critical for air exposure endurance

(2021) Cong Zhou et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Differential Expression of Long Non-Coding RNA (lncRNA) in Mediterranean Mussel (Mytilus galloprovincialis) Hemocytes under Immune Stimuli

(2021) Patricia Pereiro et al.   Genes

Characterization of a thioester-containing protein from the pearl oyster Pinctada fucata and its role in phagocytosis

(2021) Jing Wang et al.   Aquaculture Reports

CD109 antigen-like gene is induced by ecdysone signaling and involved in the cellular immunity of Helicoverpa armigera

(2020) Di Jiang et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

The functional roles of the non-coding RNAs in molluscs

(2020) Zhang Hongkuan et al.   GENE

Identification and functional analysis of a thioester-containing protein from Portunus trituberculatus reveals its involvement in the prophenoloxidase system, phagocytosis and AMP synthesis

(2019) Junhao Ning et al.   AQUACULTURE

Re-thinking adaptive immunity in the beetles: Evolutionary and functional trajectories of lncRNAs

(2019) Ali Ali et al.   GENOMICS

Dynamic immune and metabolism response of clam Meretrix petechialis to Vibrio challenge revealed by a time series of transcriptome analysis

(2019) Jiajia Yu et al.   FISH & SHELLFISH IMMUNOLOGY

Characterization of a Toll-like receptor (TLR) signaling pathway in Biomphalaria glabrata and its potential regulation by NF-kappaB

(2018) Judith E. Humphries et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Differential lncRNA expression profiles reveal the potential roles of lncRNAs in antiviral immune response of Crassostrea gigas

(2018) Weiming Sun et al.   FISH & SHELLFISH IMMUNOLOGY

Transcriptome analysis and discovery of genes involved in immune pathways from coelomocytes of Onchidium struma after bacterial challenge

(2018) Mingming Zhang et al.   FISH & SHELLFISH IMMUNOLOGY

CD109 deficiency induces osteopenia with an osteoporosis-like phenotype in vivo

(2018) Shinji Mii et al.   GENES TO CELLS

CD109 and squamous cell carcinoma

(2018) Ruixia Qi et al.   Journal of Translational Medicine

BgTEP: An Antiprotease Involved in Innate Immune Sensing in Biomphalaria glabrata

(2018) Anaïs Portet et al.   Frontiers in Immunology

Transcriptome analysis of Mytilus coruscus hemocytes in response to Vibrio alginnolyficus infection

(2017) Wenqiang Dong et al.   FISH & SHELLFISH IMMUNOLOGY

Alternative Splicing Profile and Sex-Preferential Gene Expression in the Female and Male Pacific Abalone Haliotis discus hannai

(2017) Mi Kim et al.   Genes

Evolution and Function of Thioester-Containing Proteins and the Complement System in the Innate Immune Response

(2017) Upasana Shokal et al.   Frontiers in Immunology

Genome sequence of pacific abalone (Haliotis discus hannai): the first draft genome in family Haliotidae

(2017) Bo-Hye Nam et al.   GigaScience

Three novel C1q domain containing proteins from the disk abalone Haliotis discus discus : Genomic organization and analysis of the transcriptional changes in response to bacterial pathogens

(2016) S.D.N.K. Bathige et al.   FISH & SHELLFISH IMMUNOLOGY

PI3K-AKT signaling pathway is involved in hypoxia/thermal-induced immunosuppression of small abalone Haliotis diversicolor

(2016) Yulong Sun et al.   FISH & SHELLFISH IMMUNOLOGY

Natural environmental impacts on teleost immune function

(2016) Daniel L. Makrinos et al.   FISH & SHELLFISH IMMUNOLOGY

Identification of a female spawn-associated Kazal-type inhibitor from the tropical abalone Haliotis asinina

(2016) Tianfang Wang et al.   JOURNAL OF PEPTIDE SCIENCE

Long Non-Coding RNAs (lncRNAs) of Sea Cucumber: Large-Scale Prediction, Expression Profiling, Non-Coding Network Construction, and lncRNA-microRNA-Gene Interaction Analysis of lncRNAs in Apostichopus japonicus and Holothuria glaberrima During LPS Challenge and Radial Organ Complex Regeneration

(2016) Chuang Mu et al.   MARINE BIOTECHNOLOGY

De novo assembly and annotation of the European abalone Haliotis tuberculata transcriptome

(2016) Ewan Harney et al.   Marine Genomics

Molecular Basis for Adaptation of Oysters to Stressful Marine Intertidal Environments

(2016) Guofan Zhang et al.   Annual Review of Animal Biosciences

Gill Development and Its Functional and Evolutionary Implications in the Blue Mussel Mytilus edulis (Bivalvia: Mytilidae)

(2016) Rozenn Cannuel et al.   BIOLOGICAL BULLETIN

Transcriptome Analysis Revealed Changes of Multiple Genes Involved in Haliotis discus hannai Innate Immunity during Vibrio parahemolyticus Infection

(2016) Bo-Hye Nam et al.   PLoS One

Therapeutic potential of abalone and status of bioactive molecules: A comprehensive review

(2015) H. A. R. Suleria et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

ChAkt1 involvement in orchestrating the immune and heat shock responses in Crassostrea hongkongensis: Molecular cloning and functional characterization

(2015) Fuxuan Wang et al.   FISH & SHELLFISH IMMUNOLOGY

Identification, molecular characterization, and gene expression analysis of a CD109 molecule in the Hawaiian bobtail squid Euprymna scolopes

(2015) Natasha Yazzie et al.   FISH & SHELLFISH IMMUNOLOGY

Transcriptome profiling of the Pacific oyster Crassostrea gigas by Illumina RNA-seq

(2015) Hyun-Jeong Lim et al.   Genes & Genomics

Construction of the BAC Library of Small Abalone (Haliotis diversicolor) for Gene Screening and Genome Characterization

(2015) Likun Jiang et al.   MARINE BIOTECHNOLOGY

Transcriptome profiles of wild and cultured South African abalone, Haliotis midae

(2015) Barbara Picone et al.   Marine Genomics

De novo RNA-Seq Analysis of the Venus Clam, Cyclina sinensis, and the Identification of Immune-Related Genes

(2015) Baoping Pan et al.   PLoS One

proovread : large-scale high-accuracy PacBio correction through iterative short read consensus

(2014) Thomas Hackl et al.   BIOINFORMATICS

Multicore and GPU algorithms for Nussinov RNA folding

(2014) Junjie Li et al.   BMC BIOINFORMATICS

Identification and expression analysis of immune-related genes linked to Rel/NF-κB signaling pathway under stresses and bacterial challenge from the small abalone Haliotis diversicolor

(2014) Xin Zhang et al.   FISH & SHELLFISH IMMUNOLOGY

Exploiting genomic data to identify proteins involved in abalone reproduction

(2014) Omar Mendoza-Porras et al.   Journal of Proteomics

De Novo Characterisation of the Greenlip Abalone Transcriptome (Haliotis laevigata) with a Focus on the Heat Shock Protein 70 (HSP70) Family

(2014) Brett P. Shiel et al.   MARINE BIOTECHNOLOGY

Tegillarca granosa extract Haishengsu (HSS) suppresses expression of mdr1, BCR/ABL and sorcin in drug-resistant K562/ADM tumors in mice

(2013) GY Li et al.   Advances in Medical Sciences

Signaling networks of Rho GTPases in cell motility

(2013) Samer Hanna et al.   CELLULAR SIGNALLING

Toll-like receptors and MyD88 adaptors in Mytilus: Complete cds and gene expression levels

(2013) Mylène Toubiana et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Molecular cloning, characterization and expression analysis of three heat shock responsive genes from Haliotis diversicolor

(2013) Yitao Huang et al.   FISH & SHELLFISH IMMUNOLOGY

Cloning, characterization, hypoxia and heat shock response of hypoxia inducible factor-1 (HIF-1) from the small abalone Haliotis diversicolor

(2013) Xiuhong Cai et al.   GENE

Transcriptome-Wide Single Nucleotide Polymorphisms (SNPs) for Abalone (Haliotis midae): Validation and Application Using GoldenGate Medium-Throughput Genotyping Assays

(2013) Aletta Bester-Van Der Merwe et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Transcriptome Analysis Reveals a Rich Gene Set Related to Innate Immunity in the Eastern Oyster (Crassostrea virginica)

(2013) Linlin Zhang et al.   MARINE BIOTECHNOLOGY

Mass spectrometry and next-generation sequencing reveal an abundant and rapidly evolving abalone sperm protein

(2013) MELODY R. PALMER et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts

(2013) Liang Sun et al.   NUCLEIC ACIDS RESEARCH

Characterization of the transcriptomes ofHaliotis rufescensreproductive tissues

(2012) Valentina Valenzuela-Muñoz et al.   AQUACULTURE RESEARCH

Acclimation-dependent expression of heat shock protein 70 in Pacific abalone (Haliotis discus hannai Ino) and its acute response to thermal exposure

(2012) Jiaqi Li et al.   CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY

Characterization of interleukin-1 receptor-associated kinase 1 binding protein 1 gene in small abalone Haliotis diversicolor

(2012) Hui Ge et al.   GENE

Molecular cloning, characterization and expression of heat shock protein 70 gene from the oyster Crassostrea hongkongensis responding to thermal stress and exposure of Cu2+ and malachite green

(2012) Zhanhui Zhang et al.   GENE

Analysis of a deep transcriptome from the mantle tissue of Patella vulgata Linnaeus (Mollusca: Gastropoda: Patellidae) reveals candidate biomineralising genes

(2012) Gijsbert D. A. Werner et al.   MARINE BIOTECHNOLOGY

Transcriptome-wide polymorphisms of red abalone (Haliotis rufescens) reveal patterns of gene flow and local adaptation

(2012) Pierre De Wit et al.   MOLECULAR ECOLOGY

The oyster genome reveals stress adaptation and complexity of shell formation

(2012) Guofan Zhang et al.   NATURE

De Novo Sequencing and Transcriptome Analysis of the Central Nervous System of Mollusc Lymnaea stagnalis by Deep RNA Sequencing

(2012) Hisayo Sadamoto et al.   PLoS One

Pyrosequencing of Haliotis diversicolor Transcriptomes: Insights into Early Developmental Molluscan Gene Expression

(2012) Zi-Xia Huang et al.   PLoS One

Epithelial Nitration by a Peroxidase/NOX5 System Mediates Mosquito Antiplasmodial Immunity

(2012) G. d. A. Oliveira et al.   SCIENCE

Molecular cloning and expression of interleukin-1 receptor-associated kinase 4, an important mediator of Toll-like receptor signal pathway, from small abalone Haliotis diversicolor

(2011) Hui Ge et al.   FISH & SHELLFISH IMMUNOLOGY

An insect TEP in a crustacean is specific for cuticular tissues and involved in intestinal defense

(2011) Chenglin Wu et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Transcriptome Sequencing and De Novo Analysis for Yesso Scallop (Patinopecten yessoensis) Using 454 GS FLX

(2011) Rui Hou et al.   PLoS One

Insights into shell deposition in the Antarctic bivalve Laternula elliptica: gene discovery in the mantle transcriptome using 454 pyrosequencing

(2010) Melody S Clark et al.   BMC GENOMICS

A primitive Toll-like receptor signaling pathway in mollusk Zhikong scallop Chlamys farreri

(2010) Mengqiang Wang et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Temperature effects on oxygen thresholds for hypoxia in marine benthic organisms

(2010) RAQUEL VAQUER-SUNYER et al.   GLOBAL CHANGE BIOLOGY

Pyrosequencing of Mytilus galloprovincialis cDNAs: Tissue-Specific Expression Patterns

(2010) John A. Craft et al.   PLoS One

Molecular cloning and characterization of macrophage migration inhibitory factor from small abalone Haliotis diversicolor supertexta

(2009) Baozhen Wang et al.   FISH & SHELLFISH IMMUNOLOGY

Identification of the up-regulated expression genes in hemocytes of variously colored abalone (Haliotis diversicolor Reeve, 1846) challenged with bacteria

(2008) Ke-Jian Wang et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Molecular cloning and responsive expression of macrophage expressed gene from small abalone Haliotis diversicolor supertexta

(2007) Guo-Dong Wang et al.   FISH & SHELLFISH IMMUNOLOGY