iVirus: facilitating new insights in viral ecology with software and community data sets imbedded in a cyberinfrastructure
出版年份 2016 全文链接
标题
iVirus: facilitating new insights in viral ecology with software and community data sets imbedded in a cyberinfrastructure
作者
关键词
-
出版物
ISME Journal
Volume 11, Issue 1, Pages 7-14
出版商
Springer Nature
发表日期
2016-07-15
DOI
10.1038/ismej.2016.89
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Functional interactions of archaea, bacteria and viruses in a hypersaline endolithic community
- (2016) Alexander Crits-Christoph et al. ENVIRONMENTAL MICROBIOLOGY
- Nanoarchaeota, Their Sulfolobales Host, and Nanoarchaeota Virus Distribution across Yellowstone National Park Hot Springs
- (2015) Jacob H. Munson-McGee et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Seasonal time bombs: dominant temperate viruses affect Southern Ocean microbial dynamics
- (2015) Jennifer R Brum et al. ISME Journal
- High-Throughput Sequencing Technologies
- (2015) Jason A. Reuter et al. MOLECULAR CELL
- Patterns and ecological drivers of ocean viral communities
- (2015) J. R. Brum et al. SCIENCE
- Determinants of community structure in the global plankton interactome
- (2015) G. Lima-Mendez et al. SCIENCE
- The Human Skin Double-Stranded DNA Virome: Topographical and Temporal Diversity, Genetic Enrichment, and Dynamic Associations with the Host Microbiome
- (2015) Geoffrey D. Hannigan et al. mBio
- Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
- (2015) Simon Roux et al. eLife
- VirSorter: mining viral signal from microbial genomic data
- (2015) Simon Roux et al. PeerJ
- Metavir 2: new tools for viral metagenome comparison and assembled virome analysis
- (2014) Simon Roux et al. BMC BIOINFORMATICS
- Depth-stratified functional and taxonomic niche specialization in the ‘core’ and ‘flexible’ Pacific Ocean Virome
- (2014) Bonnie L Hurwitz et al. ISME Journal
- Modeling ecological drivers in marine viral communities using comparative metagenomics and network analyses
- (2014) B. L. Hurwitz et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Sequencing platform and library preparation choices impact viral metagenomes
- (2013) Sergei A Solonenko et al. BMC GENOMICS
- The Pacific Ocean Virome (POV): A Marine Viral Metagenomic Dataset and Associated Protein Clusters for Quantitative Viral Ecology
- (2013) Bonnie L. Hurwitz et al. PLoS One
- Rapid evolution of the human gut virome
- (2013) S. Minot et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The global virome: not as big as we thought?
- (2013) J Cesar Ignacio-Espinoza et al. Current Opinion in Virology
- Metabolic reprogramming by viruses in the sunlit and dark ocean
- (2013) Bonnie L Hurwitz et al. GENOME BIOLOGY
- CRISPR targeting reveals a reservoir of common phages associated with the human gut microbiome
- (2012) A. Stern et al. GENOME RESEARCH
- Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
- (2012) J Gregory Caporaso et al. ISME Journal
- Assessing the Diversity and Specificity of Two Freshwater Viral Communities through Metagenomics
- (2012) Simon Roux et al. PLoS One
- Ocean viruses: Rigorously evaluating the metagenomic sample-to-sequence pipeline
- (2012) Melissa B. Duhaime et al. VIROLOGY
- VIROME: a standard operating procedure for analysis of viral metagenome sequences
- (2012) K. Eric Wommack et al. Standards in Genomic Sciences
- A fast, lock-free approach for efficient parallel counting of occurrences of k-mers
- (2011) Guillaume Marçais et al. BIOINFORMATICS
- Comparative metagenomics of microbial traits within oceanic viral communities
- (2011) Itai Sharon et al. ISME Journal
- The iPlant Collaborative: Cyberinfrastructure for Plant Biology
- (2011) Stephen A. Goff et al. Frontiers in Plant Science
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- SIMAP—a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters
- (2009) Thomas Rattei et al. NUCLEIC ACIDS RESEARCH
- Metagenomic Analysis of RNA Viruses in a Fresh Water Lake
- (2009) Appolinaire Djikeng et al. PLoS One
- Reticulate Representation of Evolutionary and Functional Relationships between Phage Genomes
- (2008) G. Lima-Mendez et al. MOLECULAR BIOLOGY AND EVOLUTION
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