Ecological patterns, diversity and core taxa of microbial communities in groundwater-fed rapid gravity filters

The Bacterial Communities of Full-Scale Biologically Active, Granular Activated Carbon Filters Are Stable and Diverse and Potentially Contain Novel Ammonia-Oxidizing Microorganisms

(2015) Timothy M. LaPara et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial community composition of a household sand filter used for arsenic, iron, and manganese removal from groundwater in Vietnam

(2015) Katja Sonja Nitzsche et al.   CHEMOSPHERE

An improved method to set significance thresholds forβdiversity testing in microbial community comparisons

(2015) Arda Gülay et al.   ENVIRONMENTAL MICROBIOLOGY

Groundwater Chemistry Determines the Prokaryotic Community Structure of Waterworks Sand Filters

(2015) Christian N. Albers et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Aquifer environment selects for microbial species cohorts in sediment and groundwater

(2015) Laura A Hug et al.   ISME Journal

The activated sludge ecosystem contains a core community of abundant organisms

(2015) Aaron M Saunders et al.   ISME Journal

Complete nitrification by a single microorganism

(2015) Maartje A. H. J. van Kessel et al.   NATURE

Complete nitrification by Nitrospira bacteria

(2015) Holger Daims et al.   NATURE

Extracellular Enzyme Activity and Microbial Diversity Measured on Seafloor Exposed Basalts from Loihi Seamount Indicate the Importance of Basalts to Global Biogeochemical Cycling

(2014) Myrna E. Jacobson Meyers et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Internal Porosity of Mineral Coating Supports Microbial Activity in Rapid Sand Filters for Groundwater Treatment

(2014) Arda Gülay et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Functionally relevant diversity of closely related Nitrospira in activated sludge

(2014) Christiane Gruber-Dorninger et al.   ISME Journal

Distinct soil microbial diversity under long-term organic and conventional farming

(2014) Martin Hartmann et al.   ISME Journal

Effects of dynamic operating conditions on nitrification in biological rapid sand filters for drinking water treatment

(2014) Carson O. Lee et al.   WATER RESEARCH

NxrBencoding the beta subunit of nitrite oxidoreductase as functional and phylogenetic marker for nitrite-oxidizingNitrospira

(2013) Michael Pester et al.   ENVIRONMENTAL MICROBIOLOGY

454 pyrosequencing analyses of bacterial and archaeal richness in 21 full-scale biogas digesters

(2013) Carina Sundberg et al.   FEMS MICROBIOLOGY ECOLOGY

Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone

(2013) Sangita Ganesh et al.   ISME Journal

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Energy, ecology and the distribution of microbial life

(2013) J. L. Macalady et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A novel bench-scale column assay to investigate site-specific nitrification biokinetics in biological rapid sand filters

(2013) K. Tatari et al.   WATER RESEARCH

Microbial Survey of a Full-Scale, Biologically Active Filter for Treatment of Drinking Water

(2012) Colin P. White et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacterial Community Structure in the Drinking Water Microbiome Is Governed by Filtration Processes

(2012) Ameet J. Pinto et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Heterogeneous Nitrification in a Full-Scale Rapid Sand Filter Treating Groundwater

(2012) Laure Lopato et al.   JOURNAL OF ENVIRONMENTAL ENGINEERING

Ammonium removal pathways and microbial community in GAC-sand dual media filter in drinking water treatment

(2012) Shuo Feng et al.   JOURNAL OF ENVIRONMENTAL SCIENCES

Amplification by PCR Artificially Reduces the Proportion of the Rare Biosphere in Microbial Communities

(2012) Juan M. Gonzalez et al.   PLoS One

Global Biogeography and Quantitative Seasonal Dynamics of Gemmatimonadetes in Soil

(2011) Jennifer M. DeBruyn et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Removing Noise From Pyrosequenced Amplicons

(2011) Christopher Quince et al.   BMC BIOINFORMATICS

Beyond the Venn diagram: the hunt for a core microbiome

(2011) Ashley Shade et al.   ENVIRONMENTAL MICROBIOLOGY

The energy–diversity relationship of complex bacterial communities in Arctic deep-sea sediments

(2011) Christina Bienhold et al.   ISME Journal

454 Pyrosequencing reveals bacterial diversity of activated sludge from 14 sewage treatment plants

(2011) Tong Zhang et al.   ISME Journal

Experimental tests of the bacterial distance–decay relationship

(2010) Thomas Bell   ISME Journal

Heterogeneity of Rapid Sand Filters and Its Effect on Contaminant Transport and Nitrification Performance

(2010) Laure Lopato et al.   JOURNAL OF ENVIRONMENTAL ENGINEERING

Comparative Genomic Analysis of Fruiting Body Formation in Myxococcales

(2010) S. Huntley et al.   MOLECULAR BIOLOGY AND EVOLUTION

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Multivariate Cutoff Level Analysis (MultiCoLA) of large community data sets

(2010) Angélique Gobet et al.   NUCLEIC ACIDS RESEARCH

Fine-Scale Bacterial Beta Diversity within a Complex Ecosystem (Zodletone Spring, OK, USA): The Role of the Rare Biosphere

(2010) Noha H. Youssef et al.   PLoS One

A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria

(2010) S. Lucker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ammonia-Oxidizing Bacteria and Archaea in Groundwater Treatment and Drinking Water Distribution Systems

(2009) P. W. J. J. van der Wielen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

(2009) N. L. Ward et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Shifts betweenNitrospira- andNitrobacter-like nitrite oxidizers underlie the response of soil potential nitrite oxidation to changes in tillage practices

(2009) E. Attard et al.   ENVIRONMENTAL MICROBIOLOGY

Assessing and conserving groundwater biodiversity: synthesis and perspectives

(2009) JANINE GIBERT et al.   FRESHWATER BIOLOGY

Towards the definition of a core of microorganisms involved in anaerobic digestion of sludge

(2009) Delphine Rivière et al.   ISME Journal

Microbial community structure and its functional implications

(2009) Jed A. Fuhrman   NATURE

Microbial biodiversity in groundwater ecosystems

(2008) C. GRIEBLER et al.   FRESHWATER BIOLOGY

Molecular characterization of microbial populations in groundwater sources and sand filters for drinking water production

(2008) W.W.J.M. de Vet et al.   WATER RESEARCH