Nonribosomal peptide synthetases and nonribosomal cyanopeptides synthesis in Microcystis: A comparative genomics study

The Landscape of Recombination Events That Create Nonribosomal Peptide Diversity

(2021) Martin Baunach et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative genomics analysis of c-di-GMP metabolism and regulation in Microcystis aeruginosa

(2020) Meng Chen et al.   BMC GENOMICS

Phylogenomic Analysis of Secondary Metabolism in the Toxic Cyanobacterial Genera Anabaena, Dolichospermum and Aphanizomenon

(2020) Julia Österholm et al.   Toxins

Adenylation domains in nonribosomal peptide engineering

(2019) Hajo Kries et al.   CHEMBIOCHEM

Extracellular polysaccharide synthesis in a bloom-forming strain of Microcystis aeruginosa: implications for colonization and buoyancy

(2019) Meng Chen et al.   Scientific Reports

Cyanobacterial peptides beyond microcystins – A review on co-occurrence, toxicity, and challenges for risk assessment

(2019) Elisabeth M.-L. Janssen   WATER RESEARCH

Cyanobacterial bioactive metabolites—A review of their chemistry and biology

(2019) I-Shuo Huang et al.   HARMFUL ALGAE

antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline

(2019) Kai Blin et al.   NUCLEIC ACIDS RESEARCH

Coherence of Microcystis species revealed through population genomics

(2019) Olga M. Pérez-Carrascal et al.   ISME Journal

SWISS-MODEL: homology modelling of protein structures and complexes

(2018) Andrew Waterhouse et al.   NUCLEIC ACIDS RESEARCH

A review of microcystin detections in Estuarine and Marine waters: Environmental implications and human health risk

(2017) Ellen P. Preece et al.   HARMFUL ALGAE

DAMBE6: New Tools for Microbial Genomics, Phylogenetics, and Molecular Evolution

(2017) Xuhua Xia   JOURNAL OF HEREDITY

20 years of the SMART protein domain annotation resource

(2017) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

Genome sequences of lower Great Lakes Microcystis sp. reveal strain-specific genes that are present and expressed in western Lake Erie blooms

(2017) Kevin Anthony Meyer et al.   PLoS One

A review of the global ecology, genomics, and biogeography of the toxic cyanobacterium, Microcystis spp.

(2016) Matthew J. Harke et al.   HARMFUL ALGAE

Polyketide synthase and non-ribosomal peptide synthetase thioesterase selectivity: logic gate or a victim of fate?

(2016) Mark E. Horsman et al.   NATURAL PRODUCT REPORTS

CDD/SPARCLE: functional classification of proteins via subfamily domain architectures

(2016) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

NCBI prokaryotic genome annotation pipeline

(2016) Tatiana Tatusova et al.   NUCLEIC ACIDS RESEARCH

BPGA- an ultra-fast pan-genome analysis pipeline

(2016) Narendrakumar M. Chaudhari et al.   Scientific Reports

Genomic insights into the distribution, genetic diversity and evolution of polyketide synthases and nonribosomal peptide synthetases

(2015) Hao Wang et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

(2015) Donovan H. Parks et al.   GENOME RESEARCH

Natural Product Biosynthetic Diversity and Comparative Genomics of the Cyanobacteria

(2015) Elke Dittmann et al.   TRENDS IN MICROBIOLOGY

Comparative genomics reveals diversified CRISPR-Cas systems of globally distributed Microcystis aeruginosa, a freshwater bloom-forming cyanobacterium

(2015) Chen Yang et al.   Frontiers in Microbiology

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Nonproteinogenic Amino Acid Building Blocks for Nonribosomal Peptide and Hybrid Polyketide Scaffolds

(2013) Christopher T. Walsh et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

A Tribute to Disorder in the Genome of the Bloom-Forming Freshwater Cyanobacterium Microcystis aeruginosa

(2013) Jean-François Humbert et al.   PLoS One

Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing

(2013) P. M. Shih et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A review of current knowledge on toxic benthic freshwater cyanobacteria – Ecology, toxin production and risk management

(2013) Quiblier Catherine et al.   WATER RESEARCH

Non-Ribosomal Halogenated Protease Inhibitors from Cyanobacterial Isolates as Attractive Drug Targets

(2012) M.E. Silva-Stenico et al.   CURRENT MEDICINAL CHEMISTRY

Estimating divergence times in large molecular phylogenies

(2012) K. Tamura et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons

(2011) Nabil-Fareed Alikhan et al.   BMC GENOMICS

Cyanobacteria: an emerging source for drug discovery

(2011) Rahul Kunwar Singh et al.   JOURNAL OF ANTIBIOTICS

NRPSpredictor2—a web server for predicting NRPS adenylation domain specificity

(2011) Marc Röttig et al.   NUCLEIC ACIDS RESEARCH

Toward the estimation of the absolute quality of individual protein structure models

(2010) Pascal Benkert et al.   BIOINFORMATICS

Count: evolutionary analysis of phylogenetic profiles with parsimony and likelihood

(2010) M. Csuos   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Multiple Toxin Production in the CyanobacteriumMicrocystis: Isolation of the Toxic Protease Inhibitor Cyanopeptolin 1020

(2010) Karl Gademann et al.   JOURNAL OF NATURAL PRODUCTS

Plasticity and Evolution of Aeruginosin Biosynthesis in Cyanobacteria

(2009) K. Ishida et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Shifting the genomic gold standard for the prokaryotic species definition

(2009) Michael Richter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evidence for positive selection acting on microcystin synthetase adenylation domains in three cyanobacterial genera

(2008) Ave Tooming-Klunderud et al.   BMC EVOLUTIONARY BIOLOGY

Cyanobacterial bioactive molecules — an overview of their toxic properties

(2008) Pranita Jaiswal et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Secondary Metabolites from Cyanobacteria: Complex Structures and Powerful Bioactivities

(2008) Karl Gademann et al.   CURRENT ORGANIC CHEMISTRY

Halogenase Genes in Nonribosomal Peptide Synthetase Gene Clusters of Microcystis (Cyanobacteria): Sporadic Distribution and Evolution

(2008) S. Cadel-Six et al.   MOLECULAR BIOLOGY AND EVOLUTION

Nonribosomal Peptide Synthetases Involved in the Production of Medically Relevant Natural Products

(2008) Elizabeth A. Felnagle et al.   MOLECULAR PHARMACEUTICS