Defective cytokinin signaling reprograms lipid and flavonoid gene-to-metabolite networks to mitigate high salinity in Arabidopsis

Comparative metabolome and transcriptome analyses of susceptible Asparagus officinalis and resistant wild A. kiusianus revealed insights into stem blight disease resistance

(2020) Mostafa Abdelrahman et al.   PLANT AND CELL PHYSIOLOGY

The R2R3‐MYB transcription factor AtMYB49 modulates salt tolerance in Arabidopsis by modulating the cuticle formation and antioxidant defense

(2020) Ping Zhang et al.   PLANT CELL AND ENVIRONMENT

Characterization of raffinose metabolism genes uncovers a wild Arachis galactinol synthase conferring tolerance to abiotic stresses

(2020) Christina C. Vinson et al.   Scientific Reports

Abscisic acid-mediated induction of FLAVIN-CONTAINING MONOOXYGENASE 2 leads to reduced accumulation of methylthioalkyl glucosinolates in Arabidopsis thaliana

(2020) Yimeng Li et al.   PLANT SCIENCE

SNF1-Related Protein Kinases SnRK2.4 and SnRK2.10 Modulate ROS Homeostasis in Plant Response to Salt Stress

(2019) Katarzyna Patrycja Szymańska et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Arabidopsis IAR4 Modulates Primary Root Growth Under Salt Stress Through ROS-Mediated Modulation of Auxin Distribution

(2019) Yang Fu et al.   Frontiers in Plant Science

The Roles of GmERF135 in Improving Salt Tolerance and Decreasing ABA Sensitivity in Soybean

(2019) Meng-Jie Zhao et al.   Frontiers in Plant Science

Involvement of Phosphatidylserine and Triacylglycerol in the Response of Sweet Potato Leaves to Salt Stress

(2019) Yicheng Yu et al.   Frontiers in Plant Science

The Arabidopsis MYB transcription factor, MYB111 modulates salt responses by regulating flavonoid biosynthesis

(2019) Baozhu Li et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Overexpression of the Cytokinin Oxidase/dehydrogenase (CKX) from Medicago sativa Enhanced Salt Stress Tolerance of Arabidopsis

(2019) Shuxia Li et al.   JOURNAL OF PLANT BIOLOGY

Genome-wide and comparative analysis of bHLH38, bHLH39, bHLH100 and bHLH101 genes in Arabidopsis, tomato, rice, soybean and maize: insights into iron (Fe) homeostasis

(2018) Fırat Kurt et al.   BIOMETALS

Studies of cytokinin receptor–phosphotransmitter interaction provide evidences for the initiation of cytokinin signalling in the endoplasmic reticulum

(2018) Sergey N. Lomin et al.   FUNCTIONAL PLANT BIOLOGY

Dynamics of metabolic responses to periods of combined heat and drought in Arabidopsis thaliana under ambient and elevated atmospheric CO2

(2018) Gaurav Zinta et al.   JOURNAL OF EXPERIMENTAL BOTANY

Salt stress tolerance mechanisms and potential applications of legumes for sustainable reclamation of salt-degraded soils

(2018) Moses Akindele Abiala et al.   LAND DEGRADATION & DEVELOPMENT

Diacylglycerol acyltransferase 1 contributes to freezing tolerance

(2018) Steven A. Arisz et al.   PLANT PHYSIOLOGY

Metabolic responses to drought stress in the tissues of drought-tolerant and drought-sensitive wheat genotype seedlings

(2018) Rui Guo et al.   AoB Plants

Whole-Plant Metabolic Allocation Under Water Stress

(2018) Fabiane M. Mundim et al.   Frontiers in Plant Science

Transcriptomic and Physiological Evidence for the Relationship between Unsaturated Fatty Acid and Salt Stress in Peanut

(2018) Na Sui et al.   Frontiers in Plant Science

ArrayExpress update – from bulk to single-cell expression data

(2018) Awais Athar et al.   NUCLEIC ACIDS RESEARCH

Cytokinin action in response to abiotic and biotic stress in plants

(2018) Anne Cortleven et al.   PLANT CELL AND ENVIRONMENT

Arabidopsis molybdenum cofactor sulfurase ABA3 contributes to anthocyanin accumulation and oxidative stress tolerance in ABA-dependent and independent ways

(2018) Shunsuke Watanabe et al.   Scientific Reports

The metabolic response to drought

(2018) Norma Fàbregas et al.   JOURNAL OF EXPERIMENTAL BOTANY

A bioassay-guided fractionation system to identify endogenous small molecules that activate plasma membrane H+-ATPase activity in Arabidopsis

(2017) Xiuli Han et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Regulatory Hierarchy of the Arabidopsis Branched-chain Amino Acid Metabolic Network

(2017) Anqi Xing et al.   PLANT CELL

Multiple Copies of a Simple MYB-Binding Site Confers Trans-regulation by Specific Flavonoid-Related R2R3 MYBs in Diverse Species

(2017) Cyril Brendolise et al.   Frontiers in Plant Science

Changes in secondary metabolites in the halophytic putative crop species Crithmum maritimum L., Triglochin maritima L. and Halimione portulacoides (L.) Aellen as reaction to mild salinity

(2017) Christian Boestfleisch et al.   PLoS One

Enhancing cytokinin synthesis by overexpressingiptalleviated drought inhibition of root growth through activating ROS-scavenging systems inAgrostis stolonifera

(2016) Yi Xu et al.   JOURNAL OF EXPERIMENTAL BOTANY

A New Insight of Salt Stress Signaling in Plant

(2016) Hee Jin Park et al.   MOLECULES AND CELLS

Regulation of anthocyanin and proanthocyanidin biosynthesis byMedicago truncatulabHLH transcription factor MtTT8

(2016) Penghui Li et al.   NEW PHYTOLOGIST

PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants

(2016) Jinpu Jin et al.   NUCLEIC ACIDS RESEARCH

Salinity induces membrane structure and lipid changes in maize mesophyll and bundle sheath chloroplasts

(2016) Eiji Omoto et al.   PHYSIOLOGIA PLANTARUM

Wheat leaf lipids during heat stress: I. High day and night temperatures result in major lipid alterations

(2016) Sruthi Narayanan et al.   PLANT CELL AND ENVIRONMENT

Cell-Type-Specific H + -ATPase Activity in Root Tissues Enables K + Retention and Mediates Acclimation of Barley ( Hordeum vulgare ) to Salinity Stress

(2016) Lana Shabala et al.   PLANT PHYSIOLOGY

Arabidopsistype B cytokinin response regulators ARR1, ARR10, and ARR12 negatively regulate plant responses to drought

(2016) Kien Huu Nguyen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Alleviation of the adverse effects of salinity stress using trehalose in two rice varieties

(2016) M.M.-S. Abdallah et al.   SOUTH AFRICAN JOURNAL OF BOTANY

The Role and Regulation of ABI5 (ABA-Insensitive 5) in Plant Development, Abiotic Stress Responses and Phytohormone Crosstalk

(2016) Anna Skubacz et al.   Frontiers in Plant Science

Role of the Plasma Membrane in Saline Conditions: Lipids and Proteins

(2015) Mohamed Magdy F. Mansour et al.   BOTANICAL REVIEW

Accumulation of extra-chloroplastic triacylglycerols inArabidopsisseedlings during heat acclimation

(2015) Stephanie P. Mueller et al.   JOURNAL OF EXPERIMENTAL BOTANY

MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis

(2015) Hiroshi Tsugawa et al.   NATURE METHODS

Salinity tolerance of crops - what is the cost?

(2015) Rana Munns et al.   NEW PHYTOLOGIST

Senescence-inducible LEC2 enhances triacylglycerol accumulation in leaves without negatively affecting plant growth

(2015) Hyun Uk Kim et al.   PLANT BIOTECHNOLOGY JOURNAL

A tonoplast Glu/Asp/GABA exchanger that affects tomato fruit amino acid composition

(2015) Christopher J. Snowden et al.   PLANT JOURNAL

OsTCP19 influences developmental and abiotic stress signaling by modulating ABI4-mediated pathways

(2015) Pradipto Mukhopadhyay et al.   Scientific Reports

Endogenous Cytokinin Overproduction Modulates ROS Homeostasis and Decreases Salt Stress Resistance in Arabidopsis Thaliana

(2015) Yanping Wang et al.   Frontiers in Plant Science

Physiological implications of arginine metabolism in plants

(2015) Gudrun Winter et al.   Frontiers in Plant Science

ARACNe-based inference, using curated microarray data, of Arabidopsis thaliana root transcriptional regulatory networks

(2014) Ricardo A Chávez Montes et al.   BMC PLANT BIOLOGY

Dihydroxyacid dehydratase is important for gametophyte development and disruption causes increased susceptibility to salinity stress in Arabidopsis

(2014) Chun Zhang et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Interaction of the Arabidopsis Response Regulator ARR18 with bZIP63 Mediates the Regulation of PROLINE DEHYDROGENASE Expression

(2014) Manikandan Veerabagu et al.   Molecular Plant

Arabidopsis glycerol-3-phosphate permease 4 is localized in the plastids and involved in the accumulation of seed oil

(2014) Hiromitsu Kawai et al.   Plant Biotechnology

The Arabidopsis Ethylene/Jasmonic Acid-NRT Signaling Module Coordinates Nitrate Reallocation and the Trade-Off between Growth and Environmental Adaptation

(2014) G.-B. Zhang et al.   PLANT CELL

Roles of lipids as signaling molecules and mitigators during stress response in plants

(2014) Yozo Okazaki et al.   PLANT JOURNAL

Pathview: an R/Bioconductor package for pathway-based data integration and visualization

(2013) Weijun Luo et al.   BIOINFORMATICS

Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying both distinct and similar responses to cytokinin down- and up-regulation

(2013) Martin Černý et al.   JOURNAL OF EXPERIMENTAL BOTANY

Plant sugars are crucial players in the oxidative challenge during abiotic stress: extending the traditional concept

(2013) ELS KEUNEN et al.   PLANT CELL AND ENVIRONMENT

The role of lipid metabolism in the acquisition of desiccation tolerance inCraterostigma plantagineum: a comparative approach

(2013) Francisco Gasulla et al.   PLANT JOURNAL

The E3 Ligase AtRDUF1 Positively Regulates Salt Stress Responses in Arabidopsis thaliana

(2013) Junhua Li et al.   PLoS One

Arabidopsis AHP2, AHP3, and AHP5 histidine phosphotransfer proteins function as redundant negative regulators of drought stress response

(2013) R. Nishiyama et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multifunctional fructans and raffinose family oligosaccharides

(2013) Wim Van den Ende   Frontiers in Plant Science

Improved salt tolerance and delayed leaf senescence in transgenic cotton expressing the Agrobacterium IPT gene

(2012) Y. D. Liu et al.   BIOLOGIA PLANTARUM

Cytokinin receptor-dependent and receptor-independent pathways in the dehydration response of Arabidopsis thaliana

(2012) Na Young Kang et al.   JOURNAL OF PLANT PHYSIOLOGY

Cytokinins enhance sugar-induced anthocyanin biosynthesis in Arabidopsis

(2012) Prasanta Kumar Das et al.   MOLECULES AND CELLS

Transcriptome Analyses of a Salt-Tolerant Cytokinin-Deficient Mutant Reveal Differential Regulation of Salt Stress Response by Cytokinin Deficiency

(2012) Rie Nishiyama et al.   PLoS One

Oleosin Is Bifunctional Enzyme That Has Both Monoacylglycerol Acyltransferase and Phospholipase Activities

(2011) Velayoudame Parthibane et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Elevated cytokinin content in ipt transgenic creeping bentgrass promotes drought tolerance through regulating metabolite accumulation

(2011) E. B. Merewitz et al.   JOURNAL OF EXPERIMENTAL BOTANY

Enhanced Level of Anthocyanin Leads to Increased Salt Tolerance in Arabidopsis PAP1-D Plants upon Sucrose Treatment

(2011) Jee Eun Oh   Journal of the Korean Society for Applied Biological Chemistry

KNApSAcK Family Databases: Integrated Metabolite–Plant Species Databases for Multifaceted Plant Research

(2011) Farit Mochamad Afendi et al.   PLANT AND CELL PHYSIOLOGY

Analysis of Cytokinin Mutants and Regulation of Cytokinin Metabolic Genes Reveals Important Regulatory Roles of Cytokinins in Drought, Salt and Abscisic Acid Responses, and Abscisic Acid Biosynthesis

(2011) Rie Nishiyama et al.   PLANT CELL

ABI4 Activates DGAT1 Expression in Arabidopsis Seedlings during Nitrogen Deficiency

(2011) Y. Yang et al.   PLANT PHYSIOLOGY

Interdependence of threonine, methionine and isoleucine metabolism in plants: accumulation and transcriptional regulation under abiotic stress

(2010) Vijay Joshi et al.   AMINO ACIDS

Root-synthesized cytokinins improve shoot growth and fruit yield in salinized tomato (Solanum lycopersicum L.) plants

(2010) Michel Edmond Ghanem et al.   JOURNAL OF EXPERIMENTAL BOTANY

MassBank: a public repository for sharing mass spectral data for life sciences

(2010) Hisayuki Horai et al.   JOURNAL OF MASS SPECTROMETRY

Phosphatidic acid mediates salt stress response by regulation of MPK6 in Arabidopsis thaliana

(2010) Lijuan Yu et al.   NEW PHYTOLOGIST

Type-B response regulators ARR1 and ARR12 regulate expression of AtHKT1;1 and accumulation of sodium in Arabidopsis shoots

(2010) Michael G. Mason et al.   PLANT JOURNAL

Compensation for Systematic Cross-Contribution Improves Normalization of Mass Spectrometry Based Metabolomics Data

(2009) Henning Redestig et al.   ANALYTICAL CHEMISTRY

A Chloroplastic UDP-Glucose Pyrophosphorylase from Arabidopsis Is the Committed Enzyme for the First Step of Sulfolipid Biosynthesis

(2009) Y. Okazaki et al.   PLANT CELL

Phospholipase D and phosphatidic acid signalling in plant response to drought and salinity

(2009) YUEYUN HONG et al.   PLANT CELL AND ENVIRONMENT

Stimulation of Nonselective Amino Acid Export by Glutamine Dumper Proteins

(2009) R. Pratelli et al.   PLANT PHYSIOLOGY

arrayQualityMetrics—a bioconductor package for quality assessment of microarray data

(2008) Audrey Kauffmann et al.   BIOINFORMATICS

AmiGO: online access to ontology and annotation data

(2008) Seth Carbon et al.   BIOINFORMATICS

Type B Response Regulators of Arabidopsis Play Key Roles in Cytokinin Signaling and Plant Development

(2008) R. D. Argyros et al.   PLANT CELL

Effects of SAG12-ipt expression on cytokinin production, growth and senescence of creeping bentgrass (Agrostis stolonifera L.) under heat stress

(2008) Yan Xu et al.   PLANT GROWTH REGULATION

MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites

(2008) Fumio Matsuda et al.   PLANT JOURNAL