标题
The Yin and Yang of codon usage
作者
关键词
-
出版物
HUMAN MOLECULAR GENETICS
Volume 25, Issue R2, Pages R77-R85
出版商
Oxford University Press (OUP)
发表日期
2016-06-29
DOI
10.1093/hmg/ddw207
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Codon Usage and 3′ UTR Length Determine Maternal mRNA Stability in Zebrafish
- (2016) Yuichiro Mishima et al. MOLECULAR CELL
- Synonymous Codons Direct Cotranslational Folding toward Different Protein Conformations
- (2016) Florian Buhr et al. MOLECULAR CELL
- Codon influence on protein expression in E. coli correlates with mRNA levels
- (2016) Grégory Boël et al. NATURE
- Codon Pair Bias Is a Direct Consequence of Dinucleotide Bias
- (2016) Dusan Kunec et al. Cell Reports
- Roles for Synonymous Codon Usage in Protein Biogenesis
- (2015) Julie L. Chaney et al. Annual Review of Biophysics
- Codon Optimality Is a Major Determinant of mRNA Stability
- (2015) Vladimir Presnyak et al. CELL
- Initiation of mRNA translation in bacteria: structural and dynamic aspects
- (2015) Claudio O. Gualerzi et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Codon Usage Influences the Local Rate of Translation Elongation to Regulate Co-translational Protein Folding
- (2015) Chien-Hung Yu et al. MOLECULAR CELL
- Translational tuning optimizes nascent protein folding in cells
- (2015) S. J. Kim et al. SCIENCE
- Understanding the Influence of Codon Translation Rates on Cotranslational Protein Folding
- (2014) Edward P. O’Brien et al. ACCOUNTS OF CHEMICAL RESEARCH
- A Dual Program for Translation Regulation in Cellular Proliferation and Differentiation
- (2014) Hila Gingold et al. CELL
- Distinctive tRNA Repertoires in Proliferating versus Differentiating Cells
- (2014) Ivan Topisirovic et al. CELL
- Expanding Anfinsen’s Principle: Contributions of Synonymous Codon Selection to Rational Protein Design
- (2014) Ian M. Sander et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Local slowdown of translation by nonoptimal codons promotes nascent-chain recognition by SRP in vivo
- (2014) Sebastian Pechmann et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Protein mistranslation: friend or foe?
- (2014) Liuís Ribas de Pouplana et al. TRENDS IN BIOCHEMICAL SCIENCES
- Exposing synonymous mutations
- (2014) Ryan C. Hunt et al. TRENDS IN GENETICS
- mRNA-programmed translation pauses in the targeting of E. coli membrane proteins
- (2014) Nir Fluman et al. eLife
- Co-translational mechanisms of protein maturation
- (2013) Felix Gloge et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Genetic Code-guided Protein Synthesis and Folding inEscherichia coli
- (2013) Shaoliang Hu et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Efficient translation initiation dictates codon usage at gene start
- (2013) K. Bentele et al. Molecular Systems Biology
- Non-optimal codon usage affects expression, structure and function of clock protein FRQ
- (2013) Mian Zhou et al. NATURE
- Exonic Transcription Factor Binding Directs Codon Choice and Affects Protein Evolution
- (2013) A. B. Stergachis et al. SCIENCE
- Causes and Effects of N-Terminal Codon Bias in Bacterial Genes
- (2013) D. B. Goodman et al. SCIENCE
- Large-scale analysis of conserved rare codon clusters suggests an involvement in co-translational molecular recognition events
- (2012) Matthieu Chartier et al. BIOINFORMATICS
- Codon usage bias: causative factors, quantification methods and genome-wide patterns: with emphasis on insect genomes
- (2012) Susanta K. Behura et al. BIOLOGICAL REVIEWS
- Coding exons function as tissue-specific enhancers of nearby genes
- (2012) Ramon Y. Birnbaum et al. GENOME RESEARCH
- The anti-Shine–Dalgarno sequence drives translational pausing and codon choice in bacteria
- (2012) Gene-Wei Li et al. NATURE
- Transcriptional Enhancers in Protein-Coding Exons of Vertebrate Developmental Genes
- (2012) Deborah I. Ritter et al. PLoS One
- Discovery and Characterization of Human Exonic Transcriptional Regulatory Elements
- (2012) Arshad H. Khan et al. PLoS One
- Coupling between codon usage, translation and protein export in Escherichia coli
- (2011) Yaramah M. Zalucki et al. Biotechnology Journal
- Efficiency of translation termination in humans is highly dependent upon nucleotides in the neighbourhood of a (premature) termination codon
- (2011) F. Pacho et al. JOURNAL OF MEDICAL GENETICS
- Understanding the contribution of synonymous mutations to human disease
- (2011) Zuben E. Sauna et al. NATURE REVIEWS GENETICS
- Species-Specific Codon Context Rules Unveil Non-Neutrality Effects of Synonymous Mutations
- (2011) Gabriela R. Moura et al. PLoS One
- Increased incidence of rare codon clusters at 5' and 3' gene termini:implications for function
- (2010) Thomas F Clarke et al. BMC GENOMICS
- Folding at the birth of the nascent chain: coordinating translation with co-translational folding
- (2010) Gong Zhang et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- The mechanism of eukaryotic translation initiation and principles of its regulation
- (2010) Richard J. Jackson et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Forces that influence the evolution of codon bias
- (2010) P. M. Sharp et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- A comprehensive analysis of translational missense errors in the yeast Saccharomyces cerevisiae
- (2010) E. B. Kramer et al. RNA
- A Universal Trend of Reduced mRNA Stability near the Translation-Initiation Site in Prokaryotes and Eukaryotes
- (2010) Wanjun Gu et al. PLoS Computational Biology
- Fidelity at the Molecular Level: Lessons from Protein Synthesis
- (2009) Hani S. Zaher et al. CELL
- Transient ribosomal attenuation coordinates protein synthesis and co-translational folding
- (2009) Gong Zhang et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Selection for minimization of translational frameshifting errors as a factor in the evolution of codon usage
- (2009) Yang Huang et al. NUCLEIC ACIDS RESEARCH
- Coding-Sequence Determinants of Gene Expression in Escherichia coli
- (2009) G. Kudla et al. SCIENCE
- Biased codon usage in signal peptides: a role in protein export
- (2009) Yaramah M. Zalucki et al. TRENDS IN MICROBIOLOGY
- Selection on Codon Bias
- (2008) Ruth Hershberg et al. Annual Review of Genetics
- Preferred and avoided codon pairs in three domains of life
- (2008) Age Tats et al. BMC GENOMICS
- Analysis of the distribution of functionally relevant rare codons
- (2008) Michael Widmann et al. BMC GENOMICS
- Synonymous Mutations and Ribosome Stalling Can Lead to Altered Folding Pathways and Distinct Minima
- (2008) Chung-Jung Tsai et al. JOURNAL OF MOLECULAR BIOLOGY
- Rare Codons Cluster
- (2008) Thomas F. Clarke et al. PLoS One
- Virus Attenuation by Genome-Scale Changes in Codon Pair Bias
- (2008) J. R. Coleman et al. SCIENCE
- A pause for thought along the co-translational folding pathway
- (2008) Anton A. Komar TRENDS IN BIOCHEMICAL SCIENCES
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started