Comparative Analysis of Transposable Elements in Genus Calliptamus Grasshoppers Revealed That Satellite DNA Contributes to Genome Size Variation

A long-term conserved satellite DNA that remains unexpanded in several genomes of Characiformes fish is actively transcribed

(2021) Rodrigo Zeni dos Santos et al.   Genome Biology and Evolution

Eight Million Years of Satellite DNA Evolution in Grasshoppers of the Genus Schistocerca Illuminate the Ins and Outs of the Library Hypothesis

(2020) Octavio M Palacios-Gimenez et al.   Genome Biology and Evolution

Evolutionary rates of and selective constraints on the mitochondrial genomes of Orthoptera insects with different wing types

(2020) Huihui Chang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Comparative analysis of genomic repeat content in gomphocerine grasshoppers reveals expansion of satellite DNA and helitrons in species with unusually large genomes

(2020) Abhijeet Shah et al.   Genome Biology and Evolution

High dynamism for neo-sex chromosomes: satellite DNAs reveal complex evolution in a grasshopper

(2020) Ana B. S. M. Ferretti et al.   HEREDITY

Satellitome Analysis in the Ladybird Beetle Hippodamia variegata (Coleoptera, Coccinellidae)

(2020) Pablo Mora et al.   Genes

Global analysis of repetitive DNA from unassembled sequence reads using RepeatExplorer2

(2020) Petr Novák et al.   Nature Protocols

Genome Size of 17 Species From Caelifera (Orthoptera) and Determination of Internal Standards With Very Large Genome Size in Insecta

(2020) Ying Mao et al.   Frontiers in Physiology

Comparative analysis of morabine grasshopper genomes reveals highly abundant transposable elements and rapidly proliferating satellite DNA repeats

(2020) Octavio M. Palacios-Gimenez et al.   BMC BIOLOGY

RepeatProfiler: A pipeline for visualization and comparative analysis of repetitive DNA profiles

(2020) Sherif Negm et al.   Molecular Ecology Resources

Systematic survey of plant LTR-retrotransposons elucidates phylogenetic relationships of their polyprotein domains and provides a reference for element classification

(2019) Pavel Neumann et al.   Mobile DNA

Identification and characterization of abundant repetitive sequences in Allium cepa

(2019) Jiaping Fu et al.   Scientific Reports

High-throughput analysis of satellite DNA in the grasshopper Pyrgomorpha conica reveals abundance of homologous and heterologous higher-order repeats

(2018) Francisco J. Ruiz-Ruano et al.   CHROMOSOMA

How complete are “complete” genome assemblies?-An avian perspective

(2018) Valentina Peona et al.   Molecular Ecology Resources

Characterization of the satellitome in lower vascular plants: the case of the endangered fern Vandenboschia speciosa

(2018) F J Ruiz-Ruano et al.   ANNALS OF BOTANY

Satellite DNAs Unveil Clues about the Ancestry and Composition of B Chromosomes in Three Grasshopper Species

(2018) Diogo Milani et al.   Genes

Similar Evolutionary Trajectories for Retrotransposon Accumulation in Mammals

(2017) Reuben M. Buckley et al.   Genome Biology and Evolution

Satellite DNA: An Evolving Topic

(2017) Manuel Garrido-Ramos   Genes

Revisiting ancestral polyploidy in plants

(2017) Colin Ruprecht et al.   Science Advances

High-throughput analysis of the satellitome revealed enormous diversity of satellite DNAs in the neo-Y chromosome of the cricket Eneoptera surinamensis

(2017) Octavio Manuel Palacios-Gimenez et al.   Scientific Reports

Regular higher order repeat structures in beetleTribolium castaneumgenome

(2016) Ines Vlahović et al.   Genome Biology and Evolution

High-throughput sequencing and graph-based cluster analysis facilitate microsatellite development from a highly complex genome

(2016) Abhijeet B. Shah et al.   Ecology and Evolution

High-throughput analysis of the satellitome illuminates satellite DNA evolution

(2016) Francisco J. Ruiz-Ruano et al.   Scientific Reports

LTR retrotransposons, handy hitchhikers of plant regulation and stress response

(2015) Marie-Angèle Grandbastien   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Next-generation sequencing reveals differentially amplified tandem repeats as a major genome component of Northern Europe’s oldest Camellia japonica

(2015) Tony Heitkam et al.   CHROMOSOME RESEARCH

Repetitive DNA in eukaryotic genomes

(2015) Maria Assunta Biscotti et al.   CHROMOSOME RESEARCH

Genome-wide analysis of tandem repeats inTribolium castaneumgenome reveals abundant and highly dynamic tandem repeat families with satellite DNA features in euchromatic chromosomal arms

(2015) Martina Pavlek et al.   DNA RESEARCH

‘Satellite DNA transcripts have diverse biological roles in Drosophila’

(2015) G C S Kuhn   HEREDITY

The Contributions of Transposable Elements to the Structure, Function, and Evolution of Plant Genomes

(2014) Jeffrey L. Bennetzen et al.   Annual Review of Plant Biology

Comparative analysis of the location of rDNA in the Palaearctic bushcricket genus Isophya (Orthoptera: Tettigoniidae: Phaneropterinae)

(2014) Beata GRZYWACZ et al.   EUROPEAN JOURNAL OF ENTOMOLOGY

The locust genome provides insight into swarm formation and long-distance flight

(2014) Xianhui Wang et al.   Nature Communications

Repetitive Sequences in Plant Nuclear DNA: Types, Distribution, Evolution and Function

(2014) Shweta Mehrotra et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads

(2013) P. Novak et al.   BIOINFORMATICS

Chromosomal Mapping of Repetitive DNAs in the Grasshopper Abracris flavolineata Reveal Possible Ancestry of the B Chromosome and H3 Histone Spreading

(2013) Danilo Bueno et al.   PLoS One

Transposable Elements Are a Significant Contributor to Tandem Repeats in the Human Genome

(2012) Musaddeque Ahmed et al.   COMPARATIVE AND FUNCTIONAL GENOMICS

Different types of plant chromatin associated with modified histones H3 and H4 and methylated DNA

(2011) Lidiane Feitoza et al.   GENETICA

Repetitive DNA and next-generation sequencing: computational challenges and solutions

(2011) Todd J. Treangen et al.   NATURE REVIEWS GENETICS

Organisation of the plant genome in chromosomes

(2011) J. S. Pat Heslop-Harrison et al.   PLANT JOURNAL

Organization and Evolution of Subtelomeric Satellite Repeats in the Potato Genome

(2011) Giovana A. Torres et al.   G3-Genes Genomes Genetics

Chromosomal mapping of rDNAs and H3 histone sequences in the grasshopper rhammatocerus brasiliensis (acrididae, gomphocerinae): extensive chromosomal dispersion and co-localization of 5S rDNA/H3 histone clusters in the A complement and B chromosome

(2011) Nathalia L Oliveira et al.   Molecular Cytogenetics

Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data

(2010) Petr Novák et al.   BMC BIOINFORMATICS

B chromosome ancestry revealed by histone genes in the migratory locust

(2009) María Teruel et al.   CHROMOSOMA

Low-pass shotgun sequencing of the barley genome facilitates rapid identification of genes, conserved non-coding sequences and novel repeats

(2008) Thomas Wicker et al.   BMC GENOMICS

Satellite DNA in insects: a review

(2008) T Palomeque et al.   HEREDITY

Comparative Genomics and Molecular Dynamics of DNA Repeats in Eukaryotes

(2008) G.-F. Richard et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS