The American lobster genome reveals insights on longevity, neural, and immune adaptations

The hard clam genome reveals massive expansion and diversification of inhibitors of apoptosis in Bivalvia

(2021) Hao Song et al.   BMC BIOLOGY

Functional Insights From the Evolutionary Diversification of Big Defensins

(2020) Marco Gerdol et al.   Frontiers in Immunology

The diversification and lineage-specific expansion of nitric oxide signaling in Placozoa: insights in the evolution of gaseous transmission

(2020) Leonid L. Moroz et al.   Scientific Reports

The genome polishing tool POLCA makes fast and accurate corrections in genome assemblies

(2020) Aleksey V. Zimin et al.   PLoS Computational Biology

Penaeid shrimp genome provides insights into benthic adaptation and frequent molting

(2019) Xiaojun Zhang et al.   Nature Communications

Assembly of long, error-prone reads using repeat graphs

(2019) Mikhail Kolmogorov et al.   NATURE BIOTECHNOLOGY

Comparing Pool‐seq, Rapture, and GBS genotyping for inferring weak population structure: The American lobster ( Homarus americanus ) as a case study

(2019) Yann Dorant et al.   Ecology and Evolution

Impact of climate change on the American lobster (Homarus americanus): Physiological responses to combined exposure of elevated temperature and pCO2

(2019) Aaron K. Klymasz-Swartz et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Fast and accurate long-read assembly with wtdbg2

(2019) Jue Ruan et al.   NATURE METHODS

Decreased growth and increased shell disease in early benthic phase Homarus americanus in response to elevated CO2

(2018) EL McLean et al.   MARINE ECOLOGY PROGRESS SERIES

Regulation and function of p53: A perspective from Drosophila studies

(2018) María Clara Ingaramo et al.   MECHANISMS OF DEVELOPMENT

Characterization of the mature form of a β-defensin-like peptide, Hoa -D1, in the lobster Homarus americanus

(2018) Giap H. Vu et al.   MOLECULAR IMMUNOLOGY

Climate vulnerability and resilience in the most valuable North American fishery

(2018) Arnault Le Bris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Allatostatin C modulates nociception and immunity in Drosophila

(2018) Nathaniel D. Bachtel et al.   Scientific Reports

Decreased growth and increased shell disease in early benthic phase Homarus americanus in response to elevated CO2

(2018) EL McLean et al.   MARINE ECOLOGY PROGRESS SERIES

Clonal genome evolution and rapid invasive spread of the marbled crayfish

(2018) Julian Gutekunst et al.   Nature Ecology & Evolution

Heterochromatin: Guardian of the Genome

(2018) Aniek Janssen et al.   Annual Review of Cell and Developmental Biology

Hybrid assembly of the large and highly repetitive genome ofAegilops tauschii, a progenitor of bread wheat, with the MaSuRCA mega-reads algorithm

(2017) Aleksey V. Zimin et al.   GENOME RESEARCH

Chromatin Dynamics in Genome Stability: Roles in Suppressing Endogenous DNA Damage and Facilitating DNA Repair

(2017) Nidhi Nair et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Functional consequences of neuropeptide and small-molecule co-transmission

(2017) Michael P. Nusbaum et al.   NATURE REVIEWS NEUROSCIENCE

Census and evaluation of p53 target genes

(2017) M Fischer   ONCOGENE

The Pseudomonas syringae pv. actinidiae chemoreceptor protein F (PscF) periplasmic sensor domain: cloning, purification and X-ray crystallographic analysis

(2017) Tifany Oulavallickal et al.   Acta Crystallographica Section F-Structural Biology Communications

Estimating the total number of phosphoproteins and phosphorylation sites in eukaryotic proteomes

(2017) Panayotis Vlastaridis et al.   GigaScience

Pan-arthropod analysis reveals somatic piRNAs as an ancestral defence against transposable elements

(2017) Samuel H. Lewis et al.   Nature Ecology & Evolution

De novo transcriptome assembly for the lobster Homarus americanus and characterization of differential gene expression across nervous system tissues

(2016) Lara Lewis McGrath et al.   BMC GENOMICS

Linking risingpCO2and temperature to the larval development and physiology of the American lobster (Homarus americanus)

(2016) Jesica D. Waller et al.   ICES JOURNAL OF MARINE SCIENCE

Next-Generation Sequencing and the Crustacean Immune System: The Need for Alternatives in Immune Gene Annotation

(2016) K. F. Clark et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Seascape genomics provides evidence for thermal adaptation and current-mediated population structure in American lobster (Homarus americanus )

(2016) Laura Benestan et al.   MOLECULAR ECOLOGY

Genome Stability Requires p53

(2016) Christine M. Eischen   Cold Spring Harbor Perspectives in Medicine

The genome of the crustacean Parhyale hawaiensis, a model for animal development, regeneration, immunity and lignocellulose digestion

(2016) Damian Kao et al.   eLife

Sequence diversity and evolution of antimicrobial peptides in invertebrates

(2015) Anchalee Tassanakajon et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

p53 genes function to restrain mobile elements

(2015) Annika Wylie et al.   GENES & DEVELOPMENT

Unbiased View of Synaptic and Neuronal Gene Complement in Ctenophores: Are There Pan-neuronal and Pan-synaptic Genes across Metazoa?

(2015) Leonid L. Moroz et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

RAD genotyping reveals fine-scale genetic structuring and provides powerful population assignment in a widely distributed marine species, the American lobster (Homarus americanus)

(2015) Laura Benestan et al.   MOLECULAR ECOLOGY

The Phyre2 web portal for protein modeling, prediction and analysis

(2015) Lawrence A Kelley et al.   Nature Protocols

Independent origins of neurons and synapses: insights from ctenophores

(2015) Leonid L. Moroz et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Slow adaptation in the face of rapid warming leads to collapse of the Gulf of Maine cod fishery

(2015) Andrew J. Pershing et al.   SCIENCE

Neuropeptidergic Signaling in the American Lobster Homarus americanus: New Insights from High-Throughput Nucleotide Sequencing

(2015) Andrew E. Christie et al.   PLoS One

Genome size estimates for crustaceans using Feulgen image analysis densitometry of ethanol-preserved tissues

(2014) Nicholas W. Jeffery et al.   CYTOMETRY PART A

Characterization and functional classification of American lobster (Homarus americanus) immune factor transcripts

(2014) K. Fraser Clark   FISH & SHELLFISH IMMUNOLOGY

CYP6 P450 Enzymes and ACE-1 Duplication Produce Extreme and Multiple Insecticide Resistance in the Malaria Mosquito Anopheles gambiae

(2014) Constant V. Edi et al.   PLoS Genetics

Developmentally programmed cell death in Drosophila

(2013) Donna Denton et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

A transcriptomic analysis of American lobster (Homarus americanus) immune response during infection with the bumper car parasite Anophryoides haemophila

(2013) K. Fraser Clark et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Molecular immune response of the American lobster (Homarus americanus) to the White Spot Syndrome Virus

(2013) K. Fraser Clark et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Estimating Gene Gain and Loss Rates in the Presence of Error in Genome Assembly and Annotation Using CAFE 3

(2013) Mira V. Han et al.   MOLECULAR BIOLOGY AND EVOLUTION

Of blood cells and the nervous system

(2012) Kalpana Makhijani et al.   FLY

Differential expression of American lobster (Homarus americanus) immune related genes during infection of Aerococcus viridans var. homari, the causative agent of Gaffkemia

(2012) K. Fraser Clark et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

(2011) Guillaume Marçais et al.   BIOINFORMATICS

MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

(2011) Carson Holt et al.   BMC BIOINFORMATICS

Parallel evolution of Nitric Oxide signaling: Diversity of synthesis and memory pathways

(2011) Leonid et al.   Frontiers in Bioscience-Landmark

Meraculous: De Novo Genome Assembly with Short Paired-End Reads

(2011) Jarrod A. Chapman et al.   PLoS One

The Ecoresponsive Genome of Daphnia pulex

(2011) J. K. Colbourne et al.   SCIENCE

Ageing and longevity in the Decapoda (Crustacea): A review

(2011) G. Vogt   ZOOLOGISCHER ANZEIGER

An anti-lipopolysaccharide factor from red swamp crayfish, Procambarus clarkii, exhibited antimicrobial activities in vitro and in vivo

(2010) Chen Sun et al.   FISH & SHELLFISH IMMUNOLOGY

Nuclear DNA content variation associated with muscle fiber hypertrophic growth in decapod crustaceans

(2010) Ana Gabriela Jimenez et al.   GENOME

How to minimize formation and growth of tumours: Potential benefits of decapod crustaceans for cancer research

(2008) Günter Vogt   INTERNATIONAL JOURNAL OF CANCER