标题
Host habitat is the major determinant of the gut microbiome of fish
作者
关键词
-
出版物
Microbiome
Volume 9, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2021-07-31
DOI
10.1186/s40168-021-01113-x
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Comparative Analyses of Vertebrate Gut Microbiomes Reveal Convergence between Birds and Bats
- (2020) Se Jin Song et al. mBio
- Host diet and evolutionary history explain different aspects of gut microbiome diversity among vertebrate clades
- (2019) Nicholas D. Youngblut et al. Nature Communications
- Rates of gut microbiome divergence in mammals
- (2018) Alex H. Nishida et al. MOLECULAR ECOLOGY
- Allometry and Ecology of the Bilaterian Gut Microbiome
- (2018) Scott Sherrill-Mix et al. mBio
- Fish Gut Microbiome: Current Approaches and Future Perspectives
- (2018) Chandni Talwar et al. INDIAN JOURNAL OF MICROBIOLOGY
- Convergence of gut microbiotas in the adaptive radiations of African cichlid fishes
- (2017) Laura Baldo et al. ISME Journal
- Multi-Omics Analysis Reveals a Correlation between the Host Phylogeny, Gut Microbiota and Metabolite Profiles in Cyprinid Fishes
- (2017) Tongtong Li et al. Frontiers in Microbiology
- Microbiome evolution along divergent branches of the vertebrate tree of life: what is known and unknown
- (2016) Timothy J. Colston et al. MOLECULAR ECOLOGY
- Marine mammals harbor unique microbiotas shaped by and yet distinct from the sea
- (2016) Elisabeth M. Bik et al. Nature Communications
- The gut microbiome and degradation enzyme activity of wild freshwater fishes influenced by their trophic levels
- (2016) Han Liu et al. Scientific Reports
- A new view of the fish gut microbiome: Advances from next-generation sequencing
- (2015) Mahdi Ghanbari et al. AQUACULTURE
- Diet strongly influences the gut microbiota of surgeonfishes
- (2015) Sou Miyake et al. MOLECULAR ECOLOGY
- Structure and function of the global ocean microbiome
- (2015) S. Sunagawa et al. SCIENCE
- Proteobacteria: microbial signature of dysbiosis in gut microbiota
- (2015) Na-Ri Shin et al. TRENDS IN BIOTECHNOLOGY
- The Bamboo-Eating Giant Panda Harbors a Carnivore-Like Gut Microbiota, with Excessive Seasonal Variations
- (2015) Zhengsheng Xue et al. mBio
- Microbiota and Mucosal Immunity in Amphibians
- (2015) Bruno M. Colombo et al. Frontiers in Immunology
- Insect Gut Bacterial Diversity Determined by Environmental Habitat, Diet, Developmental Stage, and Phylogeny of Host
- (2014) Ji-Hyun Yun et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Diet is a major factor governing the fecal butyrate-producing community structure across Mammalia, Aves and Reptilia
- (2014) Marius Vital et al. ISME Journal
- Characterization of Intestinal Bacteria in Wild and Domesticated Adult Black Tiger Shrimp (Penaeus monodon)
- (2014) Wanilada Rungrassamee et al. PLoS One
- Characterization of bacterial community shift in human Ulcerative Colitis patients revealed by Illumina based 16S rRNA gene amplicon sequencing
- (2014) Sandeep A Walujkar et al. Gut Pathogens
- Characterizing the avian gut microbiota: membership, driving influences, and potential function
- (2014) David W. Waite et al. Frontiers in Microbiology
- Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences
- (2014) Jai Ram Rideout et al. PeerJ
- An increase in theAkkermansiaspp. population induced by metformin treatment improves glucose homeostasis in diet-induced obese mice
- (2013) Na-Ri Shin et al. GUT
- Fish gut microbiota analysis differentiates physiology and behavior of invasive Asian carp and indigenous American fish
- (2013) Lin Ye et al. ISME Journal
- Clinical Insights from Metagenomic Analysis of Sputum Samples from Patients with Cystic Fibrosis
- (2013) Y. W. Lim et al. JOURNAL OF CLINICAL MICROBIOLOGY
- MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
- (2013) Koichiro Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Diet rapidly and reproducibly alters the human gut microbiome
- (2013) Lawrence A. David et al. NATURE
- Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
- (2013) Morgan G I Langille et al. NATURE BIOTECHNOLOGY
- Effects of arabinoxylan-oligosaccharides (AXOS) on juvenile Siberian sturgeon (Acipenser baerii) performance, immune responses and gastrointestinal microbial community
- (2012) Zahra Geraylou et al. FISH & SHELLFISH IMMUNOLOGY
- Host genetic and environmental effects on mouse intestinal microbiota
- (2012) James H Campbell et al. ISME Journal
- Ecological drift and local exposures drive enteric bacterial community differences within species of Galápagos iguanas
- (2012) EMILY W. LANKAU et al. MOLECULAR ECOLOGY
- Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis
- (2012) KAREN E. SULLAM et al. MOLECULAR ECOLOGY
- A framework for human microbiome research
- (2012) NATURE
- Host-Gut Microbiota Metabolic Interactions
- (2012) J. K. Nicholson et al. SCIENCE
- Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment
- (2012) Xochitl C Morgan et al. GENOME BIOLOGY
- The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome
- (2012) Daniel McDonald et al. GigaScience
- Evidence for a core gut microbiota in the zebrafish
- (2011) Guus Roeselers et al. ISME Journal
- Phylogenetic analysis of the fecal microbial community in herbivorous land and marine iguanas of the Galápagos Islands using 16S rRNA-based pyrosequencing
- (2011) Pei-Ying Hong et al. ISME Journal
- Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage
- (2011) Chris L Dupont et al. ISME Journal
- Enterotypes of the human gut microbiome
- (2011) Manimozhiyan Arumugam et al. NATURE
- Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans
- (2011) B. D. Muegge et al. SCIENCE
- Metagenomic biomarker discovery and explanation
- (2011) Nicola Segata et al. GENOME BIOLOGY
- Role of gastrointestinal microbiota in fish
- (2010) Sukanta K Nayak AQUACULTURE RESEARCH
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Postprandial remodeling of the gut microbiota in Burmese pythons
- (2010) Elizabeth K Costello et al. ISME Journal
- Soil bacterial and fungal communities across a pH gradient in an arable soil
- (2010) Johannes Rousk et al. ISME Journal
- Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions
- (2010) Jens Reeder et al. NATURE METHODS
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors
- (2010) A. K. Benson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa
- (2010) C. De Filippo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
- (2010) Jeremy Goecks et al. GENOME BIOLOGY
- PyNAST: a flexible tool for aligning sequences to a template alignment
- (2009) J. G. Caporaso et al. BIOINFORMATICS
- Molecular analysis of intestinal microbiota of rainbow trout (Oncorhynchus mykiss)
- (2009) Paola Navarrete et al. FEMS MICROBIOLOGY ECOLOGY
- Community-Wide Response of the Gut Microbiota to Enteropathogenic Citrobacter rodentium Infection Revealed by Deep Sequencing
- (2009) C. Hoffmann et al. INFECTION AND IMMUNITY
- FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
- (2009) M. N. Price et al. MOLECULAR BIOLOGY AND EVOLUTION
- Worlds within worlds: evolution of the vertebrate gut microbiota
- (2008) Ruth E. Ley et al. NATURE REVIEWS MICROBIOLOGY
- NCBI BLAST: a better web interface
- (2008) M. Johnson et al. NUCLEIC ACIDS RESEARCH
- Evolution of Mammals and Their Gut Microbes
- (2008) R. E. Ley et al. SCIENCE
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