Adaptation of Soil Fungal Community Structure and Assembly to Long- Versus Short-Term Nitrogen Addition in a Tropical Forest

Nutrient availability is a dominant predictor of soil bacterial and fungal community composition after nitrogen addition in subtropical acidic forests

(2021) Juyan Cui et al.   PLoS One

Long-term nitrogen addition and reduced precipitation restructure soil fungal community in a temperate forest

(2021) Guoyong Yan et al.   SCANDINAVIAN JOURNAL OF FOREST RESEARCH

Stochastic processes drive bacterial and fungal community assembly in sustainable intensive agricultural soils of Shanghai, China

(2021) Shuangxi Li et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Temperature and microbial interactions drive the deterministic assembly processes in sediments of hot springs

(2021) Qing He et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Minerals play key roles in driving prokaryotic and fungal community in the surface sediments of the Qinghai-Tibetan lakes

(2020) Jian Yang et al.   FEMS MICROBIOLOGY ECOLOGY

How mycorrhizal associations drive plant population and community biology

(2020) Leho Tedersoo et al.   SCIENCE

Global response patterns of plant photosynthesis to nitrogen addition: A meta‐analysis

(2020) Xingyun Liang et al.   GLOBAL CHANGE BIOLOGY

Abundant fungi adapt to broader environmental gradients than rare fungi in agricultural fields

(2020) Shuo Jiao et al.   GLOBAL CHANGE BIOLOGY

Nitrogen and water addition regulate soil fungal diversity and co-occurrence networks

(2020) Yongliang Chen et al.   JOURNAL OF SOILS AND SEDIMENTS

Meta-analysis of the impacts of global change factors on soil microbial diversity and functionality

(2020) Zhenghu Zhou et al.   Nature Communications

Effects of Nitrogen Deposition on Nitrogen-Mineralizing Enzyme Activity and Soil Microbial Community Structure in a Korean Pine Plantation

(2020) Wenyuan He et al.   MICROBIAL ECOLOGY

Biogeographic patterns of microbial co-occurrence ecological networks in six American forests

(2020) Qichao Tu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Phosphorus Reduces Negative Effects of Nitrogen Addition on Soil Microbial Communities and Functions

(2020) Zongwei Xia et al.   Microorganisms

Different responses of soil bacterial and fungal communities to nitrogen deposition in a subtropical forest

(2020) Jianqing Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

A newly discovered function of nitrate reductase in chemoautotrophic vanadate transformation by natural mackinawite in aquifer

(2020) Chao He et al.   WATER RESEARCH

Protist communities are more sensitive to nitrogen fertilization than other microorganisms in diverse agricultural soils

(2019) Zhi-Bo Zhao et al.   Microbiome

Stabilization of atmospheric nitrogen deposition in China over the past decade

(2019) Guirui Yu et al.   Nature Geoscience

Fine root dynamics responses to nitrogen addition depend on root order, soil layer, and experimental duration in a subtropical forest

(2019) Wenjuan Wang et al.   BIOLOGY AND FERTILITY OF SOILS

Phylogenetic conservation of bacterial responses to soil nitrogen addition across continents

(2019) Kazuo Isobe et al.   Nature Communications

The response of soil fungal diversity and community composition to long-term fertilization

(2019) Sami Ullah et al.   APPLIED SOIL ECOLOGY

Response and driving factors of soil microbial diversity related to global nitrogen addition

(2019) Yang Yang et al.   LAND DEGRADATION & DEVELOPMENT

Long-term nitrogen fertilization indirectly affects soil fungi community structure by changing soil and pruned litter in a subtropical tea (Camellia sinensis L.) plantation in China

(2019) Xiangde Yang et al.   PLANT AND SOIL

A general framework for quantitatively assessing ecological stochasticity

(2019) Daliang Ning et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Soil fungal community assembly processes under long-term fertilization

(2019) Yu Shi et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Soil fungal assemblage complexity is dependent on soil fertility and dominated by deterministic processes

(2019) Junjie Guo et al.   NEW PHYTOLOGIST

Species Differences in Nitrogen Acquisition in Humid Subtropical Forest Inferred From 15N Natural Abundance and Its Response to Tracer Addition

(2019) Geshere Abdisa Gurmesa et al.   Forests

The scale dependence of fungal community distribution in paddy soil driven by stochastic and deterministic processes

(2019) Jianshu Zhao et al.   Fungal Ecology

Effects of long-term nitrogen deposition on phosphorus leaching dynamics in a mature tropical forest

(2018) Kaijun Zhou et al.   BIOGEOCHEMISTRY

OUP accepted manuscript

(2018)   BIOINFORMATICS

Plant acclimation to long-term high nitrogen deposition in an N-rich tropical forest

(2018) Xiankai Lu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial adaptation to long-term N supply prevents large responses in N dynamics and N losses of a subtropical forest

(2018) Xiaoge Han et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Nitrogen deposition combined with elevated precipitation is conducive to maintaining the stability of the soil fungal diversity on the Stipa baicalensis steppe

(2018) Haifang Zhang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Responses of soil microbial community to continuous experimental nitrogen additions for 13 years in a nitrogen-rich tropical forest

(2018) Cong Wang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Diversity and Enzyme Activity of Ectomycorrhizal Fungal Communities Following Nitrogen Fertilization in an Urban-Adjacent Pine Plantation

(2018) Chen Ning et al.   Forests

Effect of intermediate disturbance on soil microbial functional diversity depends on the amount of effective resources

(2018) Ximei Zhang et al.   ENVIRONMENTAL MICROBIOLOGY

Nitrogen-induced new net primary production and carbon sequestration in global forests

(2018) Enzai Du et al.   ENVIRONMENTAL POLLUTION

Nitrogen addition alters ectomycorrhizal fungal communities and soil enzyme activities in a tropical montane forest

(2017) Adriana Corrales et al.   Fungal Ecology

Contrasting the relative importance of species sorting and dispersal limitation in shaping marine bacterial versus protist communities

(2017) Wenxue Wu et al.   ISME Journal

Stochastic Community Assembly: Does It Matter in Microbial Ecology?

(2017) Jizhong Zhou et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Nitrogen deposition and precipitation induced phylogenetic clustering of arbuscular mycorrhizal fungal communities

(2017) Yong-Liang Chen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Chronic nitrogen additions fundamentally restructure the soil fungal community in a temperate forest

(2016) Eric W. Morrison et al.   Fungal Ecology

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

Engineering the Rhizosphere

(2016) Yves Dessaux et al.   TRENDS IN PLANT SCIENCE

Mineral vs. Organic Amendments: Microbial Community Structure, Activity and Abundance of Agriculturally Relevant Microbes Are Driven by Long-Term Fertilization Strategies

(2016) Davide Francioli et al.   Frontiers in Microbiology

Temporally Variable Geographical Distance Effects Contribute to the Assembly of Root-Associated Fungal Communities

(2016) Christopher J. Barnes et al.   Frontiers in Microbiology

Long-term nitrogen addition causes the evolution of less-cooperative mutualists

(2015) Dylan J. Weese et al.   EVOLUTION

Revisiting the ‘Gadgil effect’: do interguild fungal interactions control carbon cycling in forest soils?

(2015) Christopher W. Fernandez et al.   NEW PHYTOLOGIST

Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession

(2015) Francisco Dini-Andreote et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Differential responses of total and active soil microbial communities to long-term experimental N deposition

(2015) Zachary B. Freedman et al.   SOIL BIOLOGY & BIOCHEMISTRY

Estimating and mapping ecological processes influencing microbial community assembly

(2015) James C. Stegen et al.   Frontiers in Microbiology

Initial Copper Stress Strengthens the Resistance of Soil Microorganisms to a Subsequent Copper Stress

(2014) Jing Li et al.   MICROBIAL ECOLOGY

Microbial community responses to anthropogenically induced environmental change: towards a systems approach

(2013) Andrew Bissett et al.   ECOLOGY LETTERS

Nitrogen deposition weakens plant-microbe interactions in grassland ecosystems

(2013) Cunzheng Wei et al.   GLOBAL CHANGE BIOLOGY

Quantifying community assembly processes and identifying features that impose them

(2013) James C Stegen et al.   ISME Journal

Patterns and Processes of Microbial Community Assembly

(2013) D. R. Nemergut et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Metabolic modeling of species interaction in the human microbiome elucidates community-level assembly rules

(2013) R. Levy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Long-Term Experimental Nitrogen Deposition Alters the Composition of the Active Fungal Community in the Forest Floor

(2013) Elizabeth M. Entwistle et al.   SOIL SCIENCE SOCIETY OF AMERICA JOURNAL

Molecular ecological network analyses

(2012) Ye Deng et al.   BMC BIOINFORMATICS

Who is who in litter decomposition? Metaproteomics reveals major microbial players and their biogeochemical functions

(2012) Thomas Schneider et al.   ISME Journal

Stochastic and deterministic assembly processes in subsurface microbial communities

(2012) James C Stegen et al.   ISME Journal

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

Stochastic and deterministic processes interact in the assembly of desert microbial communities on a global scale

(2011) Tancredi Caruso et al.   ISME Journal

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

Phylogenetic Molecular Ecological Network of Soil Microbial Communities in Response to Elevated CO2

(2011) J. Zhou et al.   mBio

Reduction of forest soil respiration in response to nitrogen deposition

(2010) I. A. Janssens et al.   Nature Geoscience

Responses of ecosystem nitrogen cycle to nitrogen addition: a meta-analysis

(2010) Meng Lu et al.   NEW PHYTOLOGIST

Conceptual Synthesis in Community Ecology

(2010) Mark Vellend   QUARTERLY REVIEW OF BIOLOGY

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA