Different responses of soil bacterial and fungal communities to nitrogen deposition in a subtropical forest

Dissimilatory nitrate reduction to ammonium dominates soil nitrate retention capacity in subtropical forests

(2020) Xiuzhen Shi et al.   BIOLOGY AND FERTILITY OF SOILS

Critical transition of soil bacterial diversity and composition triggered by nitrogen enrichment

(2020) Weixing Liu et al.   ECOLOGY

Stabilization of atmospheric nitrogen deposition in China over the past decade

(2019) Guirui Yu et al.   Nature Geoscience

Primer selection impacts specific population abundances but not community dynamics in a monthly time-series 16S rRNA gene amplicon analysis of coastal marine bacterioplankton

(2018) Emma K. Wear et al.   ENVIRONMENTAL MICROBIOLOGY

Forest conversion induces seasonal variation in microbial β-diversity

(2018) Shengen Liu et al.   ENVIRONMENTAL MICROBIOLOGY

Plant and soil microbe responses to light, warming and nitrogen addition in a temperate forest

(2018) Shiyu Ma et al.   FUNCTIONAL ECOLOGY

Long-term warming rather than grazing significantly changed total and active soil procaryotic community structures

(2018) Rongxiao Che et al.   GEODERMA

Ammonium nitrogen content is a dominant predictor of bacterial community composition in an acidic forest soil with exogenous nitrogen enrichment

(2018) Yanxia Nie et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Responses of soil microbial community to continuous experimental nitrogen additions for 13 years in a nitrogen-rich tropical forest

(2018) Cong Wang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Diversity and Enzyme Activity of Ectomycorrhizal Fungal Communities Following Nitrogen Fertilization in an Urban-Adjacent Pine Plantation

(2018) Chen Ning et al.   Forests

Responses of forest ecosystems to increasing N deposition in China: A critical review

(2018) Di Tian et al.   ENVIRONMENTAL POLLUTION

Niche separation of comammox Nitrospira and canonical ammonia oxidizers in an acidic subtropical forest soil under long-term nitrogen deposition

(2018) Xiuzhen Shi et al.   SOIL BIOLOGY & BIOCHEMISTRY

Increased sequencing depth does not increase captured diversity of arbuscular mycorrhizal fungi

(2017) Martti Vasar et al.   MYCORRHIZA

Nitrogen deposition changes ectomycorrhizal communities in Swiss beech forests

(2017) L.C. de Witte et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Organic and inorganic nitrogen uptake by 21 dominant tree species in temperate and tropical forests

(2017) Min Liu et al.   TREE PHYSIOLOGY

Altered precipitation seasonality impacts the dominant fungal but rare bacterial taxa in subtropical forest soils

(2016) Qian Zhao et al.   BIOLOGY AND FERTILITY OF SOILS

Chronic nitrogen additions fundamentally restructure the soil fungal community in a temperate forest

(2016) Eric W. Morrison et al.   Fungal Ecology

Nitrogen fertilization directly affects soil bacterial diversity and indirectly affects bacterial community composition

(2016) Jun Zeng et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial activity in forest soil reflects the changes in ecosystem properties between summer and winter

(2015) Lucia Žifčáková et al.   ENVIRONMENTAL MICROBIOLOGY

Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii

(2015) Dimitrios Floudas et al.   FUNGAL GENETICS AND BIOLOGY

Successional and seasonal variations in soil and litter microbial community structure and function during tropical postagricultural forest regeneration: a multiyear study

(2015) A. Peyton Smith et al.   GLOBAL CHANGE BIOLOGY

The bacterial community inhabiting temperate deciduous forests is vertically stratified and undergoes seasonal dynamics

(2015) Rubén López-Mondéjar et al.   SOIL BIOLOGY & BIOCHEMISTRY

Differential responses of total and active soil microbial communities to long-term experimental N deposition

(2015) Zachary B. Freedman et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effects of nitrogen and phosphorus addition on soil microbial community in a secondary tropical forest of China

(2014) Jian Li et al.   BIOLOGY AND FERTILITY OF SOILS

Contrasting soil fungal community responses to experimental nitrogen addition using the large subunit rRNA taxonomic marker and cellobiohydrolase I functional marker

(2014) Rebecca C. Mueller et al.   MOLECULAR ECOLOGY

Soil biodiversity and soil community composition determine ecosystem multifunctionality

(2014) C. Wagg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Rate-specific responses of prokaryotic diversity and structure to nitrogen deposition in the Leymus chinensis steppe

(2014) Minjie Yao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Fungal but not bacterial soil communities recover after termination of decadal nitrogen additions to boreal forest

(2014) Mona N. Högberg et al.   SOIL BIOLOGY & BIOCHEMISTRY

Enhanced nitrogen deposition over China

(2013) Xuejun Liu et al.   NATURE

Seasonal dynamics of fungal communities in a temperate oak forest soil

(2013) Jana Voříšková et al.   NEW PHYTOLOGIST

Changes in Fungal Community Composition in Response to Elevated Atmospheric CO2 and Nitrogen Fertilization Varies with Soil Horizon

(2013) Carolyn F. Weber et al.   Frontiers in Microbiology

Identification of Cellulose-Responsive Bacterial and Fungal Communities in Geographically and Edaphically Different Soils by Using Stable Isotope Probing

(2012) Stephanie A. Eichorst et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Cross-biome metagenomic analyses of soil microbial communities and their functional attributes

(2012) N. Fierer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fundamentals of Microbial Community Resistance and Resilience

(2012) Ashley Shade et al.   Frontiers in Microbiology

Systematic Search for Cultivatable Fungi That Best Deconstruct Cell Walls of Miscanthus and Sugarcane in the Field

(2011) Prachand Shrestha et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Active and total microbial communities in forest soil are largely different and highly stratified during decomposition

(2011) Petr Baldrian et al.   ISME Journal

Simulated Atmospheric N Deposition Alters Fungal Community Composition and Suppresses Ligninolytic Gene Expression in a Northern Hardwood Forest

(2011) Ivan P. Edwards et al.   PLoS One

Soil moisture is the major factor influencing microbial community structure and enzyme activities across seven biogeoclimatic zones in western Canada

(2011) Beth F.T. Brockett et al.   SOIL BIOLOGY & BIOCHEMISTRY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Nitrogen deposition and forest nitrogen cycling along an urban-rural transect in southern China

(2010) YUNTING FANG et al.   GLOBAL CHANGE BIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Impact of white-rot fungi on numbers and community composition of bacteria colonizing beech wood from forest soil

(2009) Larissa B. Folman et al.   FEMS MICROBIOLOGY ECOLOGY

Amplification of soil fungal community DNA using the ITS86F and ITS4 primers

(2009) Tony Vancov et al.   FEMS MICROBIOLOGY LETTERS

Increased tree carbon storage in response to nitrogen deposition in the US

(2009) R. Quinn Thomas et al.   Nature Geoscience

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

Bacterial and fungal response to nitrogen fertilization in three coniferous forest soils

(2007) Fredrik Demoling et al.   SOIL BIOLOGY & BIOCHEMISTRY