Phylogeny Reveals Novel HipA-Homologous Kinase Families and Toxin-Antitoxin Gene Organizations
出版年份 2021 全文链接
标题
Phylogeny Reveals Novel HipA-Homologous Kinase Families and Toxin-Antitoxin Gene Organizations
作者
关键词
-
出版物
mBio
Volume -, Issue -, Pages -
出版商
American Society for Microbiology
发表日期
2021-06-11
DOI
10.1128/mbio.01058-21
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A Bacterial Toxin Perturbs Intracellular Amino Acid Balance To Induce Persistence
- (2021) Xiaofeng Zhou et al. mBio
- Shutoff of host transcription triggers a toxin-antitoxin system to cleave phage RNA and abort infection
- (2021) Chantal K. Guegler et al. MOLECULAR CELL
- Type II toxin-antitoxin systems: evolution and revolutions
- (2020) N. Fraikin et al. JOURNAL OF BACTERIOLOGY
- Structure of HIRAN domain of human HLTF bound to duplex DNA provides structural basis for DNA unwinding to initiate replication fork regression
- (2020) Asami Hishiki et al. JOURNAL OF BIOCHEMISTRY
- IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era
- (2020) Bui Quang Minh et al. MOLECULAR BIOLOGY AND EVOLUTION
- hipBA toxin-antitoxin systems mediate persistence in Caulobacter crescentus
- (2020) Charlie Y. Huang et al. Scientific Reports
- Stress Can Induce Transcription of Toxin-Antitoxin Systems without Activating Toxin
- (2020) Michele LeRoux et al. MOLECULAR CELL
- Abortive Infection: Bacterial Suicide as an Antiviral Immune Strategy
- (2020) Anna Lopatina et al. Annual Review of Virology
- Diverse enzymatic activities mediate antiviral immunity in prokaryotes
- (2020) Linyi Gao et al. SCIENCE
- Bacterial Retrons Function In Anti-Phage Defense
- (2020) Adi Millman et al. CELL
- Definitions and guidelines for research on antibiotic persistence
- (2019) Nathalie Q. Balaban et al. NATURE REVIEWS MICROBIOLOGY
- Interactive Tree Of Life (iTOL) v4: recent updates and new developments
- (2019) Ivica Letunic et al. NUCLEIC ACIDS RESEARCH
- Hijacking the Hijackers: Escherichia coli Pathogenicity Islands Redirect Helper Phage Packaging for Their Own Benefit
- (2019) Alfred Fillol-Salom et al. MOLECULAR CELL
- Slow growth determines nonheritable antibiotic resistance in Salmonella enterica
- (2019) Mauricio H. Pontes et al. Science Signaling
- Serine-Threonine Kinases Encoded by Split hipA Homologs Inhibit Tryptophanyl-tRNA Synthetase
- (2019) Stine Vang Nielsen et al. mBio
- Bacterial Heterogeneity and Antibiotic Survival: Understanding and Combatting Persistence and Heteroresistance
- (2019) Liselot Dewachter et al. MOLECULAR CELL
- The structure of a polygamous repressor reveals how phage-inducible chromosomal islands spread in nature
- (2019) J. Rafael Ciges-Tomas et al. Nature Communications
- How pirate phage interferes with helper phage: Comparison of the two distinct strategies
- (2019) Namiko Mitarai JOURNAL OF THEORETICAL BIOLOGY
- Targeting Antibiotic Tolerance, Pathogen by Pathogen
- (2018) Sylvain Meylan et al. CELL
- Fighting bacterial persistence: Current and emerging anti-persister strategies and therapeutics
- (2018) Valerie Defraine et al. DRUG RESISTANCE UPDATES
- Phage-inducible chromosomal islands are ubiquitous within the bacterial universe
- (2018) Alfred Fillol-Salom et al. ISME Journal
- Serine/Threonine Protein Kinases from Bacteria, Archaea and Eukarya Share a Common Evolutionary Origin Deeply Rooted in the Tree of Life
- (2018) Ivan Andreas Stancik et al. JOURNAL OF MOLECULAR BIOLOGY
- Activation of the Stringent Response by Loading of RelA-tRNA Complexes at the Ribosomal A-Site
- (2018) Kristoffer Skovbo Winther et al. MOLECULAR CELL
- Toxins, Targets, and Triggers: An Overview of Toxin-Antitoxin Biology
- (2018) Alexander Harms et al. MOLECULAR CELL
- HMMER web server: 2018 update
- (2018) Simon C Potter et al. NUCLEIC ACIDS RESEARCH
- The kinases HipA and HipA7 phosphorylate different substrate pools in Escherichia coli to promote multidrug tolerance
- (2018) Maja Semanjski et al. Science Signaling
- Replication Fork Reversal: Players and Guardians
- (2017) Annabel Quinet et al. MOLECULAR CELL
- Directed evolution of SecB chaperones toward toxin-antitoxin systems
- (2017) Ambre Julie Sala et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Clustal Omega for making accurate alignments of many protein sequences
- (2017) Fabian Sievers et al. PROTEIN SCIENCE
- Antibiotic tolerance facilitates the evolution of resistance
- (2017) Irit Levin-Reisman et al. SCIENCE
- ATP and autophosphorylation driven conformational changes of HipA kinase revealed by ion mobility and crosslinking mass spectrometry
- (2016) Yurong Wen et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- Enhanced Efflux Activity Facilitates Drug Tolerance in Dormant Bacterial Cells
- (2016) Yingying Pu et al. MOLECULAR CELL
- W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis
- (2016) Jana Trifinopoulos et al. NUCLEIC ACIDS RESEARCH
- Mechanisms of bacterial persistence during stress and antibiotic exposure
- (2016) Alexander Harms et al. SCIENCE
- HLTF’s Ancient HIRAN Domain Binds 3′ DNA Ends to Drive Replication Fork Reversal
- (2015) Andrew C. Kile et al. MOLECULAR CELL
- Obg and Membrane Depolarization Are Part of a Microbial Bet-Hedging Strategy that Leads to Antibiotic Tolerance
- (2015) Natalie Verstraeten et al. MOLECULAR CELL
- Acis-acting antitoxin domain within the chromosomal toxin-antitoxin module EzeT ofEscherichia coliquenches toxin activity
- (2015) Andrea Rocker et al. MOLECULAR MICROBIOLOGY
- The chromosomal SezAT toxin-antitoxin system promotes the maintenance of the SsPI-1 pathogenicity island in epidemicStreptococcus suis
- (2015) Xinyue Yao et al. MOLECULAR MICROBIOLOGY
- HipBA–promoter structures reveal the basis of heritable multidrug tolerance
- (2015) Maria A. Schumacher et al. NATURE
- The Phyre2 web portal for protein modeling, prediction and analysis
- (2015) Lawrence A Kelley et al. Nature Protocols
- The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence
- (2014) Yurong Wen et al. NUCLEIC ACIDS RESEARCH
- Remarkable Mechanisms in Microbes to Resist Phage Infections
- (2014) Ron L. Dy et al. Annual Review of Virology
- HipA-Triggered Growth Arrest and -Lactam Tolerance in Escherichia coli Are Mediated by RelA-Dependent ppGpp Synthesis
- (2013) G. Bokinsky et al. JOURNAL OF BACTERIOLOGY
- Cell Growth Inhibition upon Deletion of Four Toxin-Antitoxin Loci from the Megaplasmids of Sinorhizobium meliloti
- (2013) B. Milunovic et al. JOURNAL OF BACTERIOLOGY
- Ultrafast Approximation for Phylogenetic Bootstrap
- (2013) B. Q. Minh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Molecular Mechanism of Bacterial Persistence by HipA
- (2013) Elsa Germain et al. MOLECULAR CELL
- Dynamic Persistence of Antibiotic-Stressed Mycobacteria
- (2013) Y. Wakamoto et al. SCIENCE
- HipA-mediated antibiotic persistence via phosphorylation of the glutamyl-tRNA-synthetase
- (2013) Ilana Kaspy et al. Nature Communications
- Identification and classification of bacterial Type III toxin–antitoxin systems encoded in chromosomal and plasmid genomes
- (2012) Tim R. Blower et al. NUCLEIC ACIDS RESEARCH
- Evolution of the eukaryotic protein kinases as dynamic molecular switches
- (2012) S. S. Taylor et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Regulation of the Escherichia coli HipBA Toxin-Antitoxin System by Proteolysis
- (2012) Sonja Hansen et al. PLoS One
- Role of Unusual P Loop Ejection and Autophosphorylation in HipA-Mediated Persistence and Multidrug Tolerance
- (2012) Maria A. Schumacher et al. Cell Reports
- Evolution of Stress Response in the Face of Unreliable Environmental Signals
- (2012) Markus Arnoldini et al. PLoS Computational Biology
- Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
- (2011) F. Sievers et al. Molecular Systems Biology
- Diversity of bacterial type II toxin–antitoxin systems: a comprehensive search and functional analysis of novel families
- (2011) Raphaël Leplae et al. NUCLEIC ACIDS RESEARCH
- The Three Vibrio cholerae Chromosome II-Encoded ParE Toxins Degrade Chromosome I following Loss of Chromosome II
- (2010) J. Yuan et al. JOURNAL OF BACTERIOLOGY
- Moonlighting bacteriophage proteins derepress staphylococcal pathogenicity islands
- (2010) María Ángeles Tormo-Más et al. NATURE
- New kinase regulation mechanism found in HipBA: a bacterial persistence switch
- (2009) Artem Evdokimov et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Jalview Version 2--a multiple sequence alignment editor and analysis workbench
- (2009) A. M. Waterhouse et al. BIOINFORMATICS
- SaPI mutations affecting replication and transfer and enabling autonomous replication in the absence of helper phage
- (2009) Carles Úbeda et al. MOLECULAR MICROBIOLOGY
- The phage abortive infection system, ToxIN, functions as a protein–RNA toxin–antitoxin pair
- (2009) Peter C. Fineran et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Molecular Mechanisms of HipA-Mediated Multidrug Tolerance and Its Neutralization by HipB
- (2009) M. A. Schumacher et al. SCIENCE
- Comprehensive Functional Analysis of Mycobacterium tuberculosis Toxin-Antitoxin Systems: Implications for Pathogenesis, Stress Responses, and Evolution
- (2009) Holly R. Ramage et al. PLoS Genetics
- A Toxin–Antitoxin System Promotes the Maintenance of an Integrative Conjugative Element
- (2009) Rachel A. F. Wozniak et al. PLoS Genetics
- HicA of Escherichia coli Defines a Novel Family of Translation-Independent mRNA Interferases in Bacteria and Archaea
- (2008) M. G. Jorgensen et al. JOURNAL OF BACTERIOLOGY
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started