Cell-free chemoenzymatic starch synthesis from carbon dioxide

A new-to-nature carboxylation module to improve natural and synthetic CO2 fixation

(2021) Marieke Scheffen et al.   Nature Catalysis

A modular in vitro platform for the production of terpenes and polyketides from CO2

(2021) Srividhya Sundaram et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Light-powered CO2 fixation in a chloroplast mimic with natural and synthetic parts

(2020) Tarryn E. Miller et al.   SCIENCE

Converting Escherichia coli to a Synthetic Methylotroph Growing Solely on Methanol

(2020) Frederic Y.-H. Chen et al.   CELL

Evolutionary innovations in starch metabolism

(2020) Melanie R Abt et al.   CURRENT OPINION IN PLANT BIOLOGY

Isobutanol production freed from biological limits using synthetic biochemistry

(2020) Saken Sherkhanov et al.   Nature Communications

Solar cell efficiency tables (version 57)

(2020) Martin Green et al.   PROGRESS IN PHOTOVOLTAICS

Awakening a latent carbon fixation cycle in Escherichia coli

(2020) Ari Satanowski et al.   Nature Communications

Constructing a synthetic pathway for acetyl-coenzyme A from one-carbon through enzyme design

(2019) Xiaoyun Lu et al.   Nature Communications

2-Hydroxyacyl-CoA lyase catalyzes acyloin condensation for one-carbon bioconversion

(2019) Alexander Chou et al.   Nature Chemical Biology

Advances and challenges in understanding the electrocatalytic conversion of carbon dioxide to fuels

(2019) Yuvraj Y. Birdja et al.   Nature Energy

Systematic design and in vitro validation of novel one-carbon assimilation pathways

(2019) Xue Yang et al.   METABOLIC ENGINEERING

CO2 hydrogenation to high-value products via heterogeneous catalysis

(2019) Run-Ping Ye et al.   Nature Communications

Ethanol effects on the overexpression of heterologous catalase in Escherichia coli BL21 (DE3)

(2018) Hongchen Zheng et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Insights into Cell-Free Conversion of CO2 to Chemicals by a Multienzyme Cascade Reaction

(2018) Raushan Kumar Singh et al.   ACS Catalysis

A synthetic biochemistry platform for cell free production of monoterpenes from glucose

(2017) Tyler P. Korman et al.   Nature Communications

A highly selective and stable ZnO-ZrO 2 solid solution catalyst for CO 2 hydrogenation to methanol

(2017) Jijie Wang et al.   Science Advances

A synthetic pathway for the fixation of carbon dioxide in vitro

(2016) Thomas Schwander et al.   SCIENCE

ATLAS of Biochemistry: A Repository of All Possible Biochemical Reactions for Synthetic Biology and Metabolic Engineering Studies

(2016) Noushin Hadadi et al.   ACS Synthetic Biology

Tethering of Nicotinamide Adenine Dinucleotide Inside Hollow Nanofibers for High-Yield Synthesis of Methanol from Carbon Dioxide Catalyzed by Coencapsulated Multienzymes

(2015) Xiaoyuan Ji et al.   ACS Nano

Straightforward Synthesis of Terminally Phosphorylated L -Sugars via Multienzymatic Cascade Reactions

(2015) Virgil Hélaine et al.   ADVANCED SYNTHESIS & CATALYSIS

Mechanistic Analysis of an Engineered Enzyme that Catalyzes the Formose Reaction

(2015) Sean Poust et al.   CHEMBIOCHEM

Vibrio vulnificusglycogen branching enzyme preferentially transfers very short chains: N1 domain determines the chain length transferred

(2015) Hye-Jin Jo et al.   FEBS LETTERS

C1 metabolism redesigned

(2015) Yi-Shu Tai et al.   Nature Chemical Biology

Asymmetric assembly of aldose carbohydrates from formaldehyde and glycolaldehyde by tandem biocatalytic aldol reactions

(2015) Anna Szekrenyi et al.   Nature Chemistry

PubChem Substance and Compound databases

(2015) Sunghwan Kim et al.   NUCLEIC ACIDS RESEARCH

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

(2015) Ron Caspi et al.   NUCLEIC ACIDS RESEARCH

Computational protein design enables a novel one-carbon assimilation pathway

(2015) Justin B. Siegel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An Unprecedented Effective Enzymatic Carboxylation of Phenols

(2015) Jie Ren et al.   ACS Catalysis

Rapid Selective Electrocatalytic Reduction of Carbon Dioxide to Formate by an Iridium Pincer Catalyst Immobilized on Carbon Nanotube Electrodes

(2014) Peng Kang et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

POVME 2.0: An Enhanced Tool for Determining Pocket Shape and Volume Characteristics

(2014) Jacob D. Durrant et al.   Journal of Chemical Theory and Computation

BRENDA in 2015: exciting developments in its 25th year of existence

(2014) Antje Chang et al.   NUCLEIC ACIDS RESEARCH

Efficient CO2-Reducing Activity of NAD-Dependent Formate Dehydrogenase from Thiobacillus sp. KNK65MA for Formate Production from CO2 Gas

(2014) Hyunjun Choe et al.   PLoS One

Cold Adaptation: Structural and Functional Characterizations of Psychrophilic and Mesophilic Acetate Kinase

(2014) Md. Abul Kashem Tang et al.   PROTEIN JOURNAL

Engineered short branched-chain acyl-CoA synthesis in E. coli and acylation of chloramphenicol to branched-chain derivatives

(2013) Huiping Bi et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Starch biosynthesis, its regulation and biotechnological approaches to improve crop yields

(2013) Abdellatif Bahaji et al.   BIOTECHNOLOGY ADVANCES

COBRApy: COnstraints-Based Reconstruction and Analysis for Python

(2013) Ali Ebrahim et al.   BMC Systems Biology

Design and simulation of a methanol production plant from CO2 hydrogenation

(2013) Éverton Simões Van-Dal et al.   JOURNAL OF CLEANER PRODUCTION

Enhancing Sucrose Synthase Activity Results in Increased Levels of Starch and ADP-Glucose in Maize (Zea mays L.) Seed Endosperms

(2013) Jun Li et al.   PLANT AND CELL PHYSIOLOGY

Methylotrophic Bacillus methanolicus Encodes Two Chromosomal and One Plasmid Born NAD+ Dependent Methanol Dehydrogenase Paralogs with Different Catalytic and Biochemical Properties

(2013) Anne Krog et al.   PLoS One

Enzymatic transformation of nonfood biomass to starch

(2013) C. You et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Facilitated Substrate Channeling in a Self-Assembled Trifunctional Enzyme Complex

(2012) Chun You et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Suppression of α-amylase genes improves quality of rice grain ripened under high temperature

(2012) Makoto Hakata et al.   PLANT BIOTECHNOLOGY JOURNAL

Rational Engineering of Enzyme Allosteric Regulation through Sequence Evolution Analysis

(2012) Jae-Seong Yang et al.   PLoS Computational Biology

Aptamer-Mediated Inhibition ofMycobacterium tuberculosisPolyphosphate Kinase 2

(2011) Ka To Shum et al.   BIOCHEMISTRY

Structural basis for the bifunctionality of fructose-1,6-bisphosphate aldolase/phosphatase

(2011) Shinya Fushinobu et al.   NATURE

eQuilibrator--the biochemical thermodynamics calculator

(2011) A. Flamholz et al.   NUCLEIC ACIDS RESEARCH

Open Babel: An open chemical toolbox

(2011) Noel M O'Boyle et al.   Journal of Cheminformatics

Characterization of recombinant fructose-1,6-bisphosphate aldolase from Methylococcus capsulatus Bath

(2010) O. N. Rozova et al.   BIOCHEMISTRY-MOSCOW

Calibur: a tool for clustering large numbers of protein decoys

(2010) Shuai Cheng Li et al.   BMC BIOINFORMATICS

Fructose 1,6-bisphosphate aldolase/phosphatase may be an ancestral gluconeogenic enzyme

(2010) Rafael F. Say et al.   NATURE

Over-expression of AGPase genes enhances seed weight and starch content in transgenic maize

(2010) Ning Li et al.   PLANTA

Design and analysis of synthetic carbon fixation pathways

(2010) A. Bar-Even et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biochemistry and Genetics of Starch Synthesis

(2010) Peter L. Keeling et al.   Annual Review of Food Science and Technology

Asymmetric Self- and Cross-Aldol Reactions of Glycolaldehyde Catalyzed by D-Fructose-6-phosphate Aldolase

(2009) Xavier Garrabou et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

What is the maximum efficiency with which photosynthesis can convert solar energy into biomass?

(2008) Xin-Guang Zhu et al.   CURRENT OPINION IN BIOTECHNOLOGY

Replacement of a Phenylalanine by a Tyrosine in the Active Site Confers Fructose-6-phosphate Aldolase Activity to the Transaldolase ofEscherichia coliand Human Origin

(2008) Sarah Schneider et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Backrub-Like Backbone Simulation Recapitulates Natural Protein Conformational Variability and Improves Mutant Side-Chain Prediction

(2008) Colin A. Smith et al.   JOURNAL OF MOLECULAR BIOLOGY

RosettaLigand Docking with Full Ligand and Receptor Flexibility

(2008) Ian W. Davis et al.   JOURNAL OF MOLECULAR BIOLOGY