Computational models in the service of X‐ray and cryo‐ electron microscopy structure determination
出版年份 2021 全文链接
标题
Computational models in the service of X‐ray and
cryo‐
electron microscopy structure determination
作者
关键词
-
出版物
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
Volume -, Issue -, Pages -
出版商
Wiley
发表日期
2021-08-27
DOI
10.1002/prot.26223
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Integrated, rational molecular replacement
- (2021) Isabel Usón et al. Acta Crystallographica Section D-Structural Biology
- Multisubunit RNA Polymerases of Jumbo Bacteriophages
- (2020) Maria L. Sokolova et al. Viruses-Basel
- Structure and function of bacteriophage CBA120 ORF211 (TSP2), the determinant of phage specificity towards E. coli O157:H7
- (2020) Julia Greenfield et al. Scientific Reports
- Using quantum chemistry to estimate chemical shifts in biomolecules
- (2020) David A. Case BIOPHYSICAL CHEMISTRY
- Structural basis for transcription initiation by bacterial ECF σ factors
- (2019) Lingting Li et al. Nature Communications
- Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120
- (2019) Michel Plattner et al. JOURNAL OF MOLECULAR BIOLOGY
- Structure and tailspike glycosidase machinery of ORF212 from E. coli O157:H7 phage CBA120 (TSP3)
- (2019) Julia Greenfield et al. Scientific Reports
- Advances in protein structure prediction and design
- (2019) Brian Kuhlman et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Ternary structure of the outer membrane transporter FoxA with resolved signalling domain provides insights into TonB-mediated siderophore uptake
- (2019) Inokentijs Josts et al. eLife
- Gut bacteria responding to dietary change encode sialidases that exhibit preference for red meat-associated carbohydrates
- (2019) Livia S. Zaramela et al. Nature Microbiology
- Modelling structures in cryo-EM maps
- (2019) Sony Malhotra et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Cryo‐electron microscopy targets in CASP13: Overview and evaluation of results
- (2019) Andriy Kryshtafovych et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Critical assessment of methods of protein structure prediction (CASP)—Round XIII
- (2019) Andriy Kryshtafovych et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Molecular replacement using structure predictions from databases
- (2019) Adam J. Simpkin et al. Acta Crystallographica Section D-Structural Biology
- A Completely Reimplemented MPI Bioinformatics Toolkit with a New HHpred Server at its Core
- (2018) Lukas Zimmermann et al. JOURNAL OF MOLECULAR BIOLOGY
- Epsin and Sla2 form assemblies through phospholipid interfaces
- (2018) Maria M. Garcia-Alai et al. Nature Communications
- cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination
- (2017) Ali Punjani et al. NATURE METHODS
- A non-canonical multisubunit RNA polymerase encoded by the AR9 phage recognizes the template strand of its uracil-containing promoters
- (2017) Maria Sokolova et al. NUCLEIC ACIDS RESEARCH
- Critical assessment of methods of protein structure prediction (CASP)-Round XII
- (2017) John Moult et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Transcription Profiling of Bacillus subtilis Cells Infected with AR9, a Giant Phage Encoding Two Multisubunit RNA Polymerases
- (2017) Daria Lavysh et al. mBio
- Sialidases from gut bacteria: a mini-review
- (2016) N. Juge et al. BIOCHEMICAL SOCIETY TRANSACTIONS
- Structure of the T4 baseplate and its function in triggering sheath contraction
- (2016) Nicholas M. I. Taylor et al. NATURE
- The genome of AR9, a giant transducing Bacillus phage encoding two multisubunit RNA polymerases
- (2016) Daria Lavysh et al. VIROLOGY
- STAC—A New Domain Associated with Transmembrane Solute Transport and Two-Component Signal Transduction Systems
- (2015) Mateusz Korycinski et al. JOURNAL OF MOLECULAR BIOLOGY
- The I-TASSER Suite: protein structure and function prediction
- (2015) Jianyi Yang et al. NATURE METHODS
- The Phyre2 web portal for protein modeling, prediction and analysis
- (2015) Lawrence A Kelley et al. Nature Protocols
- Some of the most interesting CASP11 targets through the eyes of their authors
- (2015) Andriy Kryshtafovych et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- A soluble mutant of the transmembrane receptor Af1503 features strong changes in coiled-coil periodicity
- (2014) Marcus D. Hartmann et al. JOURNAL OF STRUCTURAL BIOLOGY
- Crystallographic snapshot of the Escherichia coli EnvZ histidine kinase in an active conformation
- (2014) Hedda U. Ferris et al. JOURNAL OF STRUCTURAL BIOLOGY
- Development of Giant Bacteriophage KZ Is Independent of the Host Transcription Apparatus
- (2014) P.-J. Ceyssens et al. JOURNAL OF VIROLOGY
- Crystal Structure of ORF210 from E. coli O157:H1 Phage CBA120 (TSP1), a Putative Tailspike Protein
- (2014) Chen Chen et al. PLoS One
- The carbohydrate-active enzymes database (CAZy) in 2013
- (2013) Vincent Lombard et al. NUCLEIC ACIDS RESEARCH
- A suggested new bacteriophage genus: “Viunalikevirus”
- (2012) Evelien M. Adriaenssens et al. ARCHIVES OF VIROLOGY
- Host sialoglycans and bacterial sialidases: a mucosal perspective
- (2012) Amanda L. Lewis et al. CELLULAR MICROBIOLOGY
- Accurate protein structure modeling using sparse NMR data and homologous structure information
- (2012) J. M. Thompson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mechanism of Regulation of Receptor Histidine Kinases
- (2012) Hedda U. Ferris et al. STRUCTURE
- Using SAD data inPhaser
- (2011) Randy J. Read et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- REFMAC5 for the refinement of macromolecular crystal structures
- (2011) Garib N. Murshudov et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- The Mechanisms of HAMP-Mediated Signaling in Transmembrane Receptors
- (2011) Hedda U. Ferris et al. STRUCTURE
- Recent developments in classical density modification
- (2010) Kevin Cowtan ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Features and development ofCoot
- (2010) P. Emsley et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- PHENIX: a comprehensive Python-based system for macromolecular structure solution
- (2010) Paul D. Adams et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- I-TASSER: a unified platform for automated protein structure and function prediction
- (2010) Ambrish Roy et al. Nature Protocols
- Molecular replacement withMOLREP
- (2009) Alexei Vagin et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Outcome of a Workshop on Applications of Protein Models in Biomedical Research
- (2009) Torsten Schwede et al. STRUCTURE
- I-TASSER server for protein 3D structure prediction
- (2008) Yang Zhang BMC BIOINFORMATICS
- The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics
- (2008) B. L. Cantarel et al. NUCLEIC ACIDS RESEARCH
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More