Ecological Linkages between a Biofilm Ecosystem and Reactor Performance: The Specificity of Biofilm Development Phases

Distinct growth stages controlled by the interplay of deterministic and stochastic processes in functional anammox biofilms

(2021) Robert Niederdorfer et al.   WATER RESEARCH

Interaction variability shapes succession of synthetic microbial ecosystems

(2020) Feng Liu et al.   Nature Communications

Successional Dynamics of Molecular Ecological Network of Anammox Microbial Communities under Elevated Salinity

(2020) Tao Ya et al.   WATER RESEARCH

Forfeiting the priority effect: turnover defines biofilm community succession

(2019) Colin J. Brislawn et al.   ISME Journal

Taxonomic relatedness and environmental pressure synergistically drive the primary succession of biofilm microbial communities in reclaimed wastewater distribution systems

(2019) Guijuan Zhang et al.   ENVIRONMENT INTERNATIONAL

Combined Deterministic and Stochastic Processes Control Microbial Succession in Replicate Granular Biofilm Reactors

(2019) Raquel Liébana et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Importance of Species Sorting and Immigration on the Bacterial Assembly of Different-Sized Aggregates in a Full-Scale Aerobic Granular Sludge Plant

(2019) Muhammad Ali et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Bacterial assembly in the bio-cake of membrane bioreactors: Stochastic vs. deterministic processes

(2019) Ronghua Xu et al.   WATER RESEARCH

Impacts of diel temperature variations on nitrogen removal and metacommunity of anammox biofilm reactors

(2019) Yabing Meng et al.   WATER RESEARCH

Moving bed biofilm reactor technology in municipal wastewater treatment: A review

(2019) Alessandro di Biase et al.   JOURNAL OF ENVIRONMENTAL MANAGEMENT

Large-sized planktonic bioaggregates possess high biofilm formation potentials: Bacterial succession and assembly in the biofilm metacommunity

(2019) Ronghua Xu et al.   WATER RESEARCH

Potential roles of acyl homoserine lactone based quorum sensing in sequencing batch nitrifying biofilm reactors with or without the addition of organic carbon

(2018) Yuepeng Sun et al.   BIORESOURCE TECHNOLOGY

A novel single-stage process integrating simultaneous COD oxidation, partial nitritation-denitritation and anammox (SCONDA) for treating ammonia-rich organic wastewater

(2018) Xin Zhou et al.   BIORESOURCE TECHNOLOGY

Towards physicochemical and biological effects on detachment and activity recovery of aging biofilm by enzyme and surfactant treatments

(2018) Hui Huang et al.   BIORESOURCE TECHNOLOGY

Metagenomics-based interpretation of AHLs-mediated quorum sensing in Anammox biofilm reactors for low-strength wastewater treatment

(2018) Yuepeng Sun et al.   CHEMICAL ENGINEERING JOURNAL

The mechanical scouring of bio-carriers improves phosphorus removal and mediates functional microbiomes in membrane bioreactors

(2018) Ronghua Xu et al.   Environmental Science-Water Research & Technology

Strain-level diversity drives alternative community types in millimetre-scale granular biofilms

(2018) Gabriel E. Leventhal et al.   Nature Microbiology

Attachment of anaerobic ammonium-oxidizing bacteria to augmented carrier material

(2017) Maciej S. Kowalski et al.   ENVIRONMENTAL TECHNOLOGY

Stochastic Community Assembly: Does It Matter in Microbial Ecology?

(2017) Jizhong Zhou et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Augmentation of acyl homoserine lactones-producing and -quenching bacterium into activated sludge for its granulation

(2017) Yu-Sheng Li et al.   WATER RESEARCH

From biofilm ecology to reactors: a focused review

(2017) Joshua P. Boltz et al.   WATER SCIENCE AND TECHNOLOGY

Metabolic network analysis reveals microbial community interactions in anammox granules

(2017) Christopher E. Lawson et al.   Nature Communications

The Social Life of Aeromonas through Biofilm and Quorum Sensing Systems

(2017) Emilie Talagrand-Reboul et al.   Frontiers in Microbiology

Wastewater Valorization by Pure Bacterial Cultures to Extracellular Polymeric Substances (EPS) with High Emulsifying Potential and Flocculation Activities

(2017) Efi-Maria Drakou et al.   Waste and Biomass Valorization

Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns

(2017) Amnon Amir et al.   mSystems

Halotolerant aminopeptidase M29 from Mesorhizobium SEMIA 3007 with biotechnological potential and its impact on biofilm synthesis

(2017) Elwi Machado Sierra et al.   Scientific Reports

Escaping the biofilm in more than one way: desorption, detachment or dispersion

(2016) Olga E Petrova et al.   CURRENT OPINION IN MICROBIOLOGY

Coexistence facilitates interspecific biofilm formation in complex microbial communities

(2016) Jonas S. Madsen et al.   ENVIRONMENTAL MICROBIOLOGY

Characterization and Significance of Sub-Visible Particles and Colloids in a Submerged Anaerobic Membrane Bioreactor (SAnMBR)

(2016) Zhongbo Zhou et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Methods for increasing the rate of anammox attachment in a sidestream deammonification MBBR

(2016) S. Klaus et al.   WATER SCIENCE AND TECHNOLOGY

Physicochemical characteristics and microbial community evolution of biofilms during the start-up period in a moving bed biofilm reactor

(2015) Yan Zhu et al.   BIORESOURCE TECHNOLOGY

Network succession reveals the importance of competition in response to emulsified vegetable oil amendment for uranium bioremediation

(2015) Ye Deng et al.   ENVIRONMENTAL MICROBIOLOGY

The ecology of the microbiome: Networks, competition, and stability

(2015) K. Z. Coyte et al.   SCIENCE

Biofouling of Reverse Osmosis Membranes: Positively Contributing Factors of Sphingomonas

(2014) Jenia Gutman et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Metacommunity organisation, spatial extent and dispersal in aquatic systems: patterns, processes and prospects

(2014) Jani Heino et al.   FRESHWATER BIOLOGY

The role of quorum sensing signalling in EPS production and the assembly of a sludge community into aerobic granules

(2014) Chuan Hao Tan et al.   ISME Journal

High prevalence of biofilm synergy among bacterial soil isolates in cocultures indicates bacterial interspecific cooperation

(2014) Dawei Ren et al.   ISME Journal

Competition-dispersal tradeoff ecologically differentiates recently speciated marine bacterioplankton populations

(2014) Y. Yawata et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interactions in multispecies biofilms: do they actually matter?

(2014) Mette Burmølle et al.   TRENDS IN MICROBIOLOGY

Structure, composition, and strength of nitrifying membrane-aerated biofilms

(2014) Carles Pellicer-Nàcher et al.   WATER RESEARCH

Biofilm development and the dynamics of preferential flow paths in porous media

(2013) Simona Bottero et al.   BIOFOULING

Quantifying community assembly processes and identifying features that impose them

(2013) James C Stegen et al.   ISME Journal

Comparison of bacterial communities of biofilms formed on different membrane surfaces

(2013) Sang-Hoon Lee et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Stochastic Assembly Leads to Alternative Communities with Distinct Functions in a Bioreactor Microbial Community

(2013) J. Zhou et al.   mBio

Molecular ecological network analyses

(2012) Ye Deng et al.   BMC BIOINFORMATICS

Competition, Not Cooperation, Dominates Interactions among Culturable Microbial Species

(2012) Kevin R. Foster et al.   CURRENT BIOLOGY

Effect of Different Operational Conditions on Biofilm Development, Nitrification, and Nitrifying Microbial Population in Moving-Bed Biofilm Reactors

(2012) J. P. Bassin et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Cure of Filament-Caused MBR Fouling in the Presence of Antibiotics: Taking Ciprofloxacin Exposure As an Example

(2012) Fangang Meng et al.   INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

betapart: an R package for the study of beta diversity

(2012) Andrés Baselga et al.   Methods in Ecology and Evolution

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

Should we stay or should we go: mechanisms and ecological consequences for biofilm dispersal

(2011) Diane McDougald et al.   NATURE REVIEWS MICROBIOLOGY

Phylogenetic Molecular Ecological Network of Soil Microbial Communities in Response to Elevated CO2

(2011) J. Zhou et al.   mBio

Functional Molecular Ecological Networks

(2010) J. Zhou et al.   mBio

Biofilm engineering: linking biofilm development at different length and time scales

(2009) E. Morgenroth et al.   REVIEWS IN ENVIRONMENTAL SCIENCE AND BIO-TECHNOLOGY

Nitrate removal using Brevundimonas diminuta MTCC 8486 from ground water

(2009) S. Kavitha et al.   WATER SCIENCE AND TECHNOLOGY