The ecology of the microbiome: Networks, competition, and stability

Interaction-type diversity hypothesis and interaction strength: the condition for the positive complexity-stability effect to arise

(2015) Michio Kondoh et al.   POPULATION ECOLOGY

Ecological communities by design

(2015) J. K. Fredrickson   SCIENCE

The microbiome of uncontacted Amerindians

(2015) J. C. Clemente et al.   Science Advances

Classification and quantification of bacteriophage taxa in human gut metagenomes

(2014) Alison S Waller et al.   ISME Journal

The gut microbiota, bacterial metabolites and colorectal cancer

(2014) Petra Louis et al.   NATURE REVIEWS MICROBIOLOGY

Evolutionary limits to cooperation in microbial communities

(2014) Nuno M. Oliveira et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

On the structural stability of mutualistic systems

(2014) R. P. Rohr et al.   SCIENCE

The Genotypic View of Social Interactions in Microbial Communities

(2013) Sara Mitri et al.   Annual Review of Genetics

Microbiota Modulate Behavioral and Physiological Abnormalities Associated with Neurodevelopmental Disorders

(2013) Elaine Y. Hsiao et al.   CELL

Patterns and Processes of Microbial Community Assembly

(2013) D. R. Nemergut et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota

(2013) P. C. Kashyap et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Long-Term Stability of the Human Gut Microbiota

(2013) J. J. Faith et al.   SCIENCE

Ecological Modeling from Time-Series Inference: Insight into Dynamics and Stability of Intestinal Microbiota

(2013) Richard R. Stein et al.   PLoS Computational Biology

Competition, Not Cooperation, Dominates Interactions among Culturable Microbial Species

(2012) Kevin R. Foster et al.   CURRENT BIOLOGY

Identifying genomic and metabolic features that can underlie early successional and opportunistic lifestyles of human gut symbionts

(2012) C. Lozupone et al.   GENOME RESEARCH

Stability criteria for complex ecosystems

(2012) Stefano Allesina et al.   NATURE

Functional interactions between the gut microbiota and host metabolism

(2012) Valentina Tremaroli et al.   NATURE

Diversity, stability and resilience of the human gut microbiota

(2012) Catherine A. Lozupone et al.   NATURE

The human microbiome: ecosystem resilience and health

(2012) David A Relman   NUTRITION REVIEWS

Diversity of Interaction Types and Ecological Community Stability

(2012) A. Mougi et al.   SCIENCE

The Evolution of Mutualism in Gut Microbiota Via Host Epithelial Selection

(2012) Jonas Schluter et al.   PLOS BIOLOGY

Social Interaction, Noise and Antibiotic-Mediated Switches in the Intestinal Microbiota

(2012) Vanni Bucci et al.   PLoS Computational Biology

Duodenal and faecal microbiota of celiac children: molecular, phenotype and metabolome characterization

(2011) Raffaella Di Cagno et al.   BMC MICROBIOLOGY

Characterization of the Gastrointestinal Microbiota in Health and Inflammatory Bowel Disease

(2011) Peter De Cruz et al.   INFLAMMATORY BOWEL DISEASES

Antimicrobial Peptides Keep Insect Endosymbionts Under Control

(2011) F. H. Login et al.   SCIENCE

Random matrices: Universality of ESDs and the circular law

(2010) Terence Tao et al.   ANNALS OF PROBABILITY

Toward defining the autoimmune microbiome for type 1 diabetes

(2010) Adriana Giongo et al.   ISME Journal

A new vision of immunity: homeostasis of the superorganism

(2010) G Eberl   Mucosal Immunology

Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation

(2010) L. Dethlefsen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Has the Microbiota Played a Critical Role in the Evolution of the Adaptive Immune System?

(2010) Y. K. Lee et al.   SCIENCE

The human superorganism – Of microbes and men

(2009) Roy D. Sleator   MEDICAL HYPOTHESES

A microbial symbiosis factor prevents intestinal inflammatory disease

(2008) Sarkis K. Mazmanian et al.   NATURE

Defined spatial structure stabilizes a synthetic multispecies bacterial community

(2008) H. J. Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA