Acceleration of DNA Hybridization Chain Reactions on 3D Nanointerfaces of Magnetic Particles and Their Direct Application in the Enzyme-Free Amplified Detection of microRNA

Simple Single-Legged DNA Walkers at Diffusion-Limited Nanointerfaces of Gold Nanoparticles Driven by a DNA Circuit Mechanism

(2020) Motoi Oishi et al.   ACS Nano

Dynamically Programmed Switchable DNA Hydrogels Based on a DNA Circuit Mechanism

(2019) Motoi Oishi et al.   Small

Soft Robotics Programmed with Double Crosslinking DNA Hydrogels

(2019) Zhi Zhao et al.   ADVANCED FUNCTIONAL MATERIALS

Stochastic RNA Walkers for Intracellular MicroRNA Imaging

(2019) Mingshu Xiao et al.   ANALYTICAL CHEMISTRY

Exploration of the Kinetics of Toehold-Mediated Strand Displacement via Plasmon Rulers

(2018) Mei-Xing Li et al.   ACS Nano

Localized DNA Hybridization Chain Reactions on DNA Origami

(2018) Hieu Bui et al.   ACS Nano

Double Photosystems-Based ‘Z-Scheme’ Photoelectrochemical Sensing Mode for Ultrasensitive Detection of Disease Biomarker Accompanying Three-Dimensional DNA Walker

(2018) Shuzhen Lv et al.   ANALYTICAL CHEMISTRY

Accelerating DNA-based computing on a supramolecular polymer

(2018) Wouter Engelen et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Programmable Target-Initiated DNAzyme Walker Walking along a Spatially Isolated and Highly Hybridizable Substrate Track on a Nanoparticle Surface

(2018) Ke Yang et al.   ACS Applied Materials & Interfaces

A spatially localized architecture for fast and modular DNA computing

(2017) Gourab Chatterjee et al.   Nature Nanotechnology

DNA sequence–directed shape change of photopatterned hydrogels via high-degree swelling

(2017) Angelo Cangialosi et al.   SCIENCE

Design and Analysis of Localized DNA Hybridization Chain Reactions

(2017) Hieu Bui et al.   Small

Enzyme-Powered Three-Dimensional DNA Nanomachine for DNA Walking, Payload Release, and Biosensing

(2016) Xiaolong Yang et al.   ACS Nano

A Surface-Confined Proton-Driven DNA Pump Using a Dynamic 3D DNA Scaffold

(2016) Dan Zhu et al.   ADVANCED MATERIALS

An Engineered Kinetic Amplification Mechanism for Single Nucleotide Variant Discrimination by DNA Hybridization Probes

(2016) Sherry Xi Chen et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Tuning Toehold Length and Temperature to Achieve Rapid, Colorimetric Detection of DNA from the Disassembly of DNA–Gold Nanoparticle Aggregates

(2016) Michael K. Lam et al.   LANGMUIR

An Efficient Particle-Based DNA Circuit System: Catalytic Disassembly of DNA/PEG-Modified Gold Nanoparticle-Magnetic Bead Composites for Colorimetric Detection of miRNA

(2016) Motoi Oishi et al.   Small

Two-color imaging of microRNA with enzyme-free signal amplification via hybridization chain reactions in living cells

(2016) Lu Li et al.   Chemical Science

The Formal Language and Design Principles of Autonomous DNA Walker Circuits

(2016) Michael A. Boemo et al.   ACS Synthetic Biology

Enzyme-free and isothermal detection of microRNA based on click-chemical ligation-assisted hybridization coupled with hybridization chain reaction signal amplification

(2015) Motoi Oishi   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Catalytic Molecular Imaging of MicroRNA in Living Cells by DNA-Programmed Nanoparticle Disassembly

(2015) Xuewen He et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Isothermal Amplification of Nucleic Acids

(2015) Yongxi Zhao et al.   CHEMICAL REVIEWS

Electrostatic Nucleic Acid Nanoassembly Enables Hybridization Chain Reaction in Living Cells for Ultrasensitive mRNA Imaging

(2015) Zhan Wu et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

What Controls the “Off/On Switch” in the Toehold-Mediated Strand Displacement Reaction on DNA Conjugated Gold Nanoparticles?

(2015) Dongbao Yao et al.   LANGMUIR

Computing in mammalian cells with nucleic acid strand exchange

(2015) Benjamin Groves et al.   Nature Nanotechnology

Kinetic study of DNA hybridization on DNA-modified gold nanoparticles with engineered nano-interfaces

(2015) Akari Takashima et al.   RSC Advances

Probabilistic Analysis of Localized DNA Hybridization Circuits

(2015) Neil Dalchau et al.   ACS Synthetic Biology

Ultrasensitive Detection of DNA and RNA Based on Enzyme-Free Click Chemical Ligation Chain Reaction on Dispersed Gold Nanoparticles

(2014) Daiki Kato et al.   ACS Nano

Mismatches Improve the Performance of Strand-Displacement Nucleic Acid Circuits

(2014) Yu Sherry Jiang et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Functional DNA Nanostructures for Theranostic Applications

(2013) Hao Pei et al.   ACCOUNTS OF CHEMICAL RESEARCH

Gold-Nanoparticle-Based Colorimetric Discrimination of Cancer-Related Point Mutations with Picomolar Sensitivity

(2013) Paola Valentini et al.   ACS Nano

Real-Time Detection of Isothermal Amplification Reactions with Thermostable Catalytic Hairpin Assembly

(2013) Yu (Sherry) Jiang et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Programmable chemical controllers made from DNA

(2013) Yuan-Jyue Chen et al.   Nature Nanotechnology

On the biophysics and kinetics of toehold-mediated DNA strand displacement

(2013) Niranjan Srinivas et al.   NUCLEIC ACIDS RESEARCH

One-Step, Multiplexed Fluorescence Detection of microRNAs Based on Duplex-Specific Nuclease Signal Amplification

(2012) Bin-Cheng Yin et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

A Logic-Gated Nanorobot for Targeted Transport of Molecular Payloads

(2012) S. M. Douglas et al.   SCIENCE

Neural network computation with DNA strand displacement cascades

(2011) Lulu Qian et al.   NATURE

Dynamic DNA nanotechnology using strand-displacement reactions

(2011) David Yu Zhang et al.   Nature Chemistry

Rational, modular adaptation of enzyme-free DNA circuits to multiple detection methods

(2011) Bingling Li et al.   NUCLEIC ACIDS RESEARCH

Nanomaterials Based on DNA

(2010) Nadrian C. Seeman   Annual Review of Biochemistry

Programmable in situ amplification for multiplexed imaging of mRNA expression

(2010) Harry M T Choi et al.   NATURE BIOTECHNOLOGY

The Role Radius of Curvature Plays in Thiolated Oligonucleotide Loading on Gold Nanoparticles

(2009) Haley D. Hill et al.   ACS Nano

Kinetically Controlled Self-Assembly of DNA Oligomers

(2009) Daniel Lubrich et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Control of DNA Strand Displacement Kinetics Using Toehold Exchange

(2009) David Yu Zhang et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Enzyme-Based Multi-Component Optical Nanoprobes for Sequence- Specific Detection of DNA Hybridization

(2008) J. Li et al.   ADVANCED MATERIALS

Programming biomolecular self-assembly pathways

(2008) Peng Yin et al.   NATURE