Inducible uniparental chromosome disomy to probe genomic imprinting at single-cell level in brain and beyond

Genomic imprinting in plants—revisiting existing models

(2020) Rita A. Batista et al.   GENES & DEVELOPMENT

Imprinted Cdkn1c genomic locus cell-autonomously promotes cell survival in cerebral cortex development

(2020) Susanne Laukoter et al.   Nature Communications

Role of the imprinted allele of the Cdkn1c gene in mouse neocortical development

(2020) Yui Imaizumi et al.   Scientific Reports

Modeling human epigenetic disorders in mice: Beckwith-Wiedemann syndrome and Silver-Russell syndrome

(2020) Suhee Chang et al.   Disease Models & Mechanisms

Is imprinting the result of “friendly fire” by the host defense system?

(2020) Miroslava Ondičová et al.   PLoS Genetics

Placental imprinting: Emerging mechanisms and functions

(2020) Courtney W. Hanna   PLoS Genetics

Lineage Tracing and Clonal Analysis in Developing Cerebral Cortex Using Mosaic Analysis with Double Markers (MADM)

(2020) Robert Beattie et al.   Jove-Journal of Visualized Experiments

Temple syndrome and Kagami-Ogata syndrome: clinical presentations, genotypes, models and mechanisms

(2020) Rexxi Prasasya et al.   HUMAN MOLECULAR GENETICS

Maternal H3K27me3-dependent autosomal and X chromosome imprinting

(2020) Zhiyuan Chen et al.   NATURE REVIEWS GENETICS

Cell-Type Specificity of Genomic Imprinting in Cerebral Cortex

(2020) Susanne Laukoter et al.   NEURON

Long noncoding RNA functionality in imprinted domain regulation

(2020) William A. MacDonald et al.   PLoS Genetics

Genomic imprinting disorders: lessons on how genome, epigenome and environment interact

(2019) David Monk et al.   NATURE REVIEWS GENETICS

Slide-seq: A scalable technology for measuring genome-wide expression at high spatial resolution

(2019) Samuel G. Rodriques et al.   SCIENCE

Genomic Imprinting and Physiological Processes in Mammals

(2019) Valter Tucci et al.   CELL

Temporal patterning of apical progenitors and their daughter neurons in the developing neocortex

(2019) L. Telley et al.   SCIENCE

Developmental Cell Death in the Cerebral Cortex

(2019) Fong Kuan Wong et al.   Annual Review of Cell and Developmental Biology

How Does Reprogramming to Pluripotency Affect Genomic Imprinting?

(2019) Valentina Perrera et al.   Frontiers in Cell and Developmental Biology

High-definition spatial transcriptomics for in situ tissue profiling

(2019) Sanja Vickovic et al.   NATURE METHODS

Placental genotype affects early postpartum maternal behaviour

(2019) Sarah Gardner et al.   Royal Society Open Science

Genomic imprinting and evolution of insect societies

(2019) Kenji Matsuura   POPULATION ECOLOGY

New subtypes of allele-specific epigenetic effects: implications for brain development, function and disease

(2019) Stephanie N Kravitz et al.   CURRENT OPINION IN NEUROBIOLOGY

Astrocytes, neurons, synapses: a tripartite view on cortical circuit development

(2018) Isabella Farhy-Tselnicker et al.   Neural Development

Early emergence of cortical interneuron diversity in the mouse embryo

(2018) Da Mi et al.   SCIENCE

Molecular Diversity and Specializations among the Cells of the Adult Mouse Brain

(2018) Arpiar Saunders et al.   CELL

Molecular Architecture of the Mouse Nervous System

(2018) Amit Zeisel et al.   CELL

Developmental diversification of cortical inhibitory interneurons

(2018) Christian Mayer et al.   NATURE

Parent of origin gene expression in a founder population identifies two new candidate imprinted genes at known imprinted regions

(2018) Sahar V. Mozaffari et al.   PLoS One

Epigenetic and Cellular Diversity in the Brain through Allele-Specific Effects

(2018) Wei-Chao Huang et al.   TRENDS IN NEUROSCIENCES

Maternal care boosted by paternal imprinting in mammals

(2018) H. D. J. Creeth et al.   PLOS BIOLOGY

Human Models Are Needed for Studying Human Neurodevelopmental Disorders

(2018) Xinyu Zhao et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Contributing factors of mortality in Prader-Willi syndrome

(2018) Jennifer Proffitt et al.   AMERICAN JOURNAL OF MEDICAL GENETICS PART A

Imprinted genes influencing the quality of maternal care

(2018) HDJ. Creeth et al.   FRONTIERS IN NEUROENDOCRINOLOGY

Epigenetic Cues Modulating the Generation of Cell-Type Diversity in the Cerebral Cortex

(2018) Nicole Amberg et al.   JOURNAL OF NEUROCHEMISTRY

Insights into imprinting from parent-of-origin phased methylomes and transcriptomes

(2018) Florian Zink et al.   NATURE GENETICS

Cellular localization of the cell cycle inhibitor Cdkn1c controls growth arrest of adult skeletal muscle stem cells

(2018) Despoina Mademtzoglou et al.   eLife

Dopaminergic and behavioural changes in a loss-of-imprinting model of Cdkn1c

(2017) G. I. McNamara et al.   GENES BRAIN AND BEHAVIOR

Integrating Next-Generation Genomic Sequencing and Mass Spectrometry To Estimate Allele-Specific Protein Abundance in Human Brain

(2017) Thomas S. Wingo et al.   JOURNAL OF PROTEOME RESEARCH

Discriminating RNA variants with single-molecule allele-specific FISH

(2017) Martyna O. Urbanek et al.   MUTATION RESEARCH-REVIEWS IN MUTATION RESEARCH

Neuronal cell-type classification: challenges, opportunities and the path forward

(2017) Hongkui Zeng et al.   NATURE REVIEWS NEUROSCIENCE

The BRAIN Initiative Cell Census Consortium: Lessons Learned toward Generating a Comprehensive Brain Cell Atlas

(2017) Joseph R. Ecker et al.   NEURON

Spatiotemporal gene expression trajectories reveal developmental hierarchies of the human cortex

(2017) Tomasz J. Nowakowski et al.   SCIENCE

The promise of spatial transcriptomics for neuroscience in the era of molecular cell typing

(2017) Ed Lein et al.   SCIENCE

Disrupted neuronal maturation in Angelman syndrome-derived induced pluripotent stem cells

(2017) James J. Fink et al.   Nature Communications

Mapping the mouse Allelome reveals tissue-specific regulation of allelic expression

(2017) Daniel Andergassen et al.   eLife

DNA Methylation Profiling of Uniparental Disomy Subjects Provides a Map of Parental Epigenetic Bias in the Human Genome

(2016) Ricky S. Joshi et al.   AMERICAN JOURNAL OF HUMAN GENETICS

New Perspectives on Genomic Imprinting, an Essential and Multifaceted Mode of Epigenetic Control in the Developing and Adult Brain

(2016) Julio D. Perez et al.   Annual Review of Neuroscience

Recent Advances in Imprinting Disorders

(2016) L. Soellner et al.   CLINICAL GENETICS

Visualizing allele-specific expression in single cells reveals epigenetic mosaicism in anH19loss-of-imprinting mutant

(2016) Paul Ginart et al.   GENES & DEVELOPMENT

The Role of Epigenetic Mechanisms in the Regulation of Gene Expression in the Nervous System

(2016) Justyna Cholewa-Waclaw et al.   JOURNAL OF NEUROSCIENCE

Adult mouse cortical cell taxonomy revealed by single cell transcriptomics

(2016) Bosiljka Tasic et al.   NATURE NEUROSCIENCE

Angelman syndrome — insights into a rare neurogenetic disorder

(2016) Karin Buiting et al.   Nature Reviews Neurology

Genetic Background Limits Generalizability of Genotype-Phenotype Relationships

(2016) Laura J. Sittig et al.   NEURON

Regulatory links between imprinted genes: evolutionary predictions and consequences

(2016) Manus M. Patten et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Maternal prenatal depression is associated with decreased placental expression of the imprinted gene PEG3

(2016) A. B. Janssen et al.   PSYCHOLOGICAL MEDICINE

Sequential transcriptional waves direct the differentiation of newborn neurons in the mouse neocortex

(2016) L. Telley et al.   SCIENCE

Parent-of-Origin DNA Methylation Dynamics during Mouse Development

(2016) Yonatan Stelzer et al.   Cell Reports

Analysis of Genome-Wide Monoallelic Expression Patterns in Three Major Cell Types of Mouse Visual Cortex Using Laser Capture Microdissection

(2016) Chia-Yi Lin et al.   PLoS One

Generating Neuronal Diversity in the Mammalian Cerebral Cortex

(2015) Simona Lodato et al.   Annual Review of Cell and Developmental Biology

Imprinted expression in cystic embryoid bodies shows an embryonic and not an extra-embryonic pattern

(2015) Tomasz M. Kulinski et al.   DEVELOPMENTAL BIOLOGY

The landscape of genomic imprinting across diverse adult human tissues

(2015) Yael Baran et al.   GENOME RESEARCH

Genetic conflict reflected in tissue-specific maps of genomic imprinting in human and mouse

(2015) Tomas Babak et al.   NATURE GENETICS

Diversity of astrocyte functions and phenotypes in neural circuits

(2015) Baljit S Khakh et al.   NATURE NEUROSCIENCE

Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq

(2015) A. Zeisel et al.   SCIENCE

Noncanonical Genomic Imprinting Effects in Offspring

(2015) Paul J. Bonthuis et al.   Cell Reports

Quantitative and functional interrogation of parent-of-origin allelic expression biases in the brain

(2015) Julio D Perez et al.   eLife

Mechanisms of astrocyte development and their contributions to neurodevelopmental disorders

(2014) Steven A Sloan et al.   CURRENT OPINION IN NEUROBIOLOGY

Using RNA sequencing for identifying gene imprinting and random monoallelic expression in human placenta

(2014) Tauno Metsalu et al.   Epigenetics

Highly restricted deletion of the SNORD116 region is implicated in Prader–Willi Syndrome

(2014) Eric Bieth et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

The role of genomic imprinting in biology and disease: an expanding view

(2014) Jo Peters   NATURE REVIEWS GENETICS

Single-Cell RNA-Seq Reveals Dynamic, Random Monoallelic Gene Expression in Mammalian Cells

(2014) Q. Deng et al.   SCIENCE

Genomic Imprinting in Mammals

(2014) D. P. Barlow et al.   Cold Spring Harbor Perspectives in Biology

Imprinted silencing is extended over broad chromosomal domains in mouse extra-embryonic lineages

(2013) Tomasz M Kulinski et al.   CURRENT OPINION IN CELL BIOLOGY

p57 controls adult neural stem cell quiescence and modulates the pace of lifelong neurogenesis

(2013) Shohei Furutachi et al.   EMBO JOURNAL

Research progress in allele-specific expression and its regulatory mechanisms

(2013) Uma Gaur et al.   JOURNAL OF APPLIED GENETICS

Allelic specificity of Ube3a Expression In The Mouse Brain During Postnatal Development

(2013) Matthew C. Judson et al.   JOURNAL OF COMPARATIVE NEUROLOGY

Placental programming of anxiety in adulthood revealed by Igf2-null models

(2013) Mikael Allan Mikaelsson et al.   Nature Communications

Mosaic Analysis with Double Markers Reveals Cell-Type-Specific Paternal Growth Dominance

(2013) Simon Hippenmeyer et al.   Cell Reports

Base-Resolution Analyses of Sequence and Parent-of-Origin Dependent DNA Methylation in the Mouse Genome

(2012) Wei Xie et al.   CELL

Astrocytes and disease: a neurodevelopmental perspective

(2012) A. V. Molofsky et al.   GENES & DEVELOPMENT

An integrated map of genetic variation from 1,092 human genomes

(2012)   NATURE

New insights into establishment and maintenance of DNA methylation imprints in mammals

(2012) G. Kelsey et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Importance of the matriline for genomic imprinting, brain development and behaviour

(2012) E. B. Keverne   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Correction: Extensions of MADM (Mosaic Analysis with Double Markers) in Mice

(2012) Bosiljka Tasic et al.   PLoS One

Imprinted Genes … and the Number Is?

(2012) Gavin Kelsey et al.   PLoS Genetics

Critical Evaluation of Imprinted Gene Expression by RNA–Seq: A New Perspective

(2012) Brian DeVeale et al.   PLoS Genetics

p57 Is Required for Quiescence and Maintenance of Adult Hematopoietic Stem Cells

(2011) Akinobu Matsumoto et al.   Cell Stem Cell

Extra-embryonic-specific imprinted expression is restricted to defined lineages in the post-implantation embryo

(2011) Quanah J. Hudson et al.   DEVELOPMENTAL BIOLOGY

Fetal overgrowth in the Cdkn1c mouse model of Beckwith-Wiedemann syndrome

(2011) S. J. Tunster et al.   Disease Models & Mechanisms

Imprinted genes and hypothalamic function

(2011) Elena Ivanova et al.   JOURNAL OF MOLECULAR ENDOCRINOLOGY

Placenta-Imprinted Gene Expression Association of Infant Neurobehavior

(2011) Carmen J. Marsit et al.   JOURNAL OF PEDIATRICS

Deregulation of the p57-E2F1-p53 Axis Results in Nonobstructive Hydrocephalus and Cerebellar Malformation in Mice

(2011) A. Matsumoto et al.   MOLECULAR AND CELLULAR BIOLOGY

Genome-wide assessment of imprinted expression in human cells

(2011) Lisanne Morcos et al.   GENOME BIOLOGY

Uniparental disomy and human disease: An overview

(2010) Kazuki Yamazawa et al.   AMERICAN JOURNAL OF MEDICAL GENETICS PART C-SEMINARS IN MEDICAL GENETICS

Genetic Mosaic Dissection of Lis1 and Ndel1 in Neuronal Migration

(2010) Simon Hippenmeyer et al.   NEURON

Impaired hippocampal plasticity and altered neurogenesis in adult Ube3a maternal deficient mouse model for Angelman syndrome

(2009) Sandrine Mardirossian et al.   EXPERIMENTAL NEUROLOGY

Longevity in mice without a father

(2009) M. Kawahara et al.   HUMAN REPRODUCTION

CDK Inhibitors: Cell Cycle Regulators and Beyond

(2008) Arnaud Besson et al.   DEVELOPMENTAL CELL

Fate mapping Nkx2.1-lineage cells in the mouse telencephalon

(2007) Qing Xu et al.   JOURNAL OF COMPARATIVE NEUROLOGY