Hovlinc is a recently evolved class of ribozyme found in human lncRNA

Reciprocal monoallelic expression of ASAR lncRNA genes controls replication timing of human chromosome 6.

(2020) Michael Heskett et al.   RNA

An Ontology for Facilitating Discussion of Catalytic Strategies of RNA-Cleaving Enzymes

(2019) Philip C. Bevilacqua et al.   ACS Chemical Biology

Comparison of the Structures and Mechanisms of the Pistol and Hammerhead Ribozymes

(2019) Timothy J. Wilson et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Novel ribozymes: discovery, catalytic mechanisms, and the quest to understand biological function

(2019) Christina E Weinberg et al.   NUCLEIC ACIDS RESEARCH

The L-platform/L-scaffold framework: a blueprint for RNA-cleaving nucleic acid enzyme design

(2019) Colin S. Gaines et al.   RNA

B2 and ALU retrotransposons are self-cleaving ribozymes whose activity is enhanced by EZH2

(2019) Alfredo J. Hernandez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Strategies to Annotate and Characterize Long Noncoding RNAs: Advantages and Pitfalls

(2018) Huifen Cao et al.   TRENDS IN GENETICS

Ensembl 2018

(2017) Daniel R Zerbino et al.   NUCLEIC ACIDS RESEARCH

Analysis of protein-coding genetic variation in 60,706 humans

(2016) Monkol Lek et al.   NATURE

Twister ribozymes as highly versatile expression platforms for artificial riboswitches

(2016) Michele Felletti et al.   Nature Communications

New classes of self-cleaving ribozymes revealed by comparative genomics analysis

(2015) Zasha Weinberg et al.   Nature Chemical Biology

Chemistry and Biology of Self-Cleaving Ribozymes

(2015) Randi M. Jimenez et al.   TRENDS IN BIOCHEMICAL SCIENCES

Functional Nucleic-Acid-Based Sensors for Environmental Monitoring

(2014) Arghya Sett et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

A widespread self-cleaving ribozyme class is revealed by bioinformatics

(2013) Adam Roth et al.   Nature Chemical Biology

The Placental Mammal Ancestor and the Post-K-Pg Radiation of Placentals

(2013) M. A. O'Leary et al.   SCIENCE

VlincRNAs controlled by retroviral elements are a hallmark of pluripotency and cancer

(2013) Georges St Laurent et al.   GENOME BIOLOGY

Convergent Evolution of Adenosine Aptamers Spanning Bacterial, Human, and Random Sequences Revealed by Structure-Based Bioinformatics and Genomic SELEX

(2012) Michael M.K. Vu et al.   CHEMISTRY & BIOLOGY

Landscape of transcription in human cells

(2012) Sarah Djebali et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

R2R - software to speed the depiction of aesthetic consensus RNA secondary structures

(2011) Zasha Weinberg et al.   BMC BIOINFORMATICS

The majority of total nuclear-encoded non-ribosomal RNA in a human cell is 'dark matter' un-annotated RNA

(2011) Philipp Kapranov et al.   BMC BIOLOGY

Structure-based Search Reveals Hammerhead Ribozymes in the Human Microbiome

(2011) Randi M. Jimenez et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Intronic hammerhead ribozymes are ultraconserved in the human genome

(2010) Marcos de la Peña et al.   EMBO REPORTS

ProbKnot: Fast prediction of RNA secondary structure including pseudoknots

(2010) S. Bellaousov et al.   RNA

Phylogenetic analysis of 73 060 taxa corroborates major eukaryotic groups

(2009) Pablo A. Goloboff et al.   CLADISTICS

Retroposon analysis and recent geological data suggest near-simultaneous divergence of the three superorders of mammals

(2009) H. Nishihara et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A manganese-dependent ribozyme in the 3'-untranslated region of Xenopus Vg1 mRNA

(2008) N. G. Kolev et al.   NUCLEIC ACIDS RESEARCH

The Vienna RNA Websuite

(2008) A. R. Gruber et al.   NUCLEIC ACIDS RESEARCH

Metal ion specificities for folding and cleavage activity in the Schistosoma hammerhead ribozyme

(2008) J. L. Boots et al.   RNA