A widespread self-cleaving ribozyme class is revealed by bioinformatics

Structural Studies of RNase P

(2013) Alfonso Mondragón   Annual Review of Biophysics

A framework for human microbiome research

(2012)   NATURE

The ubiquitous hammerhead ribozyme

(2012) C. Hammann et al.   RNA

R2R - software to speed the depiction of aesthetic consensus RNA secondary structures

(2011) Zasha Weinberg et al.   BMC BIOINFORMATICS

Structure-based Search Reveals Hammerhead Ribozymes in the Human Microbiome

(2011) Randi M. Jimenez et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Processing and Translation Initiation of Non-long Terminal Repeat Retrotransposons by Hepatitis Delta Virus (HDV)-like Self-cleaving Ribozymes

(2011) Dana J. Ruminski et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Prospects for Riboswitch Discovery and Analysis

(2011) Ronald R. Breaker   MOLECULAR CELL

Identification of an hepatitis delta virus-like ribozyme at the mRNA 5′-end of the L1Tc retrotransposon from Trypanosoma cruzi

(2011) Francisco J. Sánchez-Luque et al.   NUCLEIC ACIDS RESEARCH

HDV-like self-cleaving ribozymes

(2011) Chiu-Ho T. Webb et al.   RNA Biology

An expanded collection and refined consensus model of glmS ribozymes

(2011) P. J. McCown et al.   RNA

Widespread Genetic Switches and Toxicity Resistance Proteins for Fluoride

(2011) J. L. Baker et al.   SCIENCE

Identification of Hammerhead Ribozymes in All Domains of Life Reveals Novel Structural Variations

(2011) Jonathan Perreault et al.   PLoS Computational Biology

R2 Retrotransposons Encode a Self-Cleaving Ribozyme for Processing from an rRNA Cotranscript

(2010) D. G. Eickbush et al.   MOLECULAR AND CELLULAR BIOLOGY

Ab initio gene identification in metagenomic sequences

(2010) Wenhan Zhu et al.   NUCLEIC ACIDS RESEARCH

CDD: a Conserved Domain Database for the functional annotation of proteins

(2010) A. Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

From alpaca to zebrafish: Hammerhead ribozymes wherever you look

(2010) C. Seehafer et al.   RNA

Ubiquitous presence of the hammerhead ribozyme motif along the tree of life

(2010) M. de la Pena et al.   RNA

An Allosteric Self-Splicing Ribozyme Triggered by a Bacterial Second Messenger

(2010) E. R. Lee et al.   SCIENCE

Group II Introns: Mobile Ribozymes that Invade DNA

(2010) A. M. Lambowitz et al.   Cold Spring Harbor Perspectives in Biology

Small Self-cleaving Ribozymes

(2010) A. R. Ferre-D'Amare et al.   Cold Spring Harbor Perspectives in Biology

Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomes

(2010) Zasha Weinberg et al.   GENOME BIOLOGY

Infernal 1.0: inference of RNA alignments

(2009) E. P. Nawrocki et al.   BIOINFORMATICS

Widespread Occurrence of Self-Cleaving Ribozymes

(2009) C.-H. T. Webb et al.   SCIENCE

Viroid Replication: Rolling-Circles, Enzymes and Ribozymes

(2009) Ricardo Flores et al.   Viruses-Basel

Catalytic Strategies of Self-Cleaving Ribozymes

(2008) Jesse C. Cochrane et al.   ACCOUNTS OF CHEMICAL RESEARCH

DARN! A Weighted Constraint Solver for RNA Motif Localization

(2008) Matthias Zytnicki et al.   CONSTRAINTS

A discontinuous hammerhead ribozyme embedded in a mammalian messenger RNA

(2008) Monika Martick et al.   NATURE

Touchdown PCR for increased specificity and sensitivity in PCR amplification

(2008) Darren J Korbie et al.   Nature Protocols