Identification of key gene networks controlling organic acid and sugar metabolism during watermelon fruit development by integrating metabolic phenotypes and gene expression profiles

Functional Analysis Reveals the Regulatory Role of PpTST1 Encoding Tonoplast Sugar Transporter in Sugar Accumulation of Peach Fruit

(2020) Peng et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

BcpLH organizes a specific subset of microRNAs to form a leafy head in Chinese cabbage (Brassica rapa ssp. pekinensis)

(2020) Wenqing Ren et al.   Horticulture Research

Expression pattern of sugars and organic acids regulatory genes during watermelon fruit development

(2020) Umer Muhammad Jawad et al.   SCIENTIA HORTICULTURAE

Genome-wide association study reveals novel loci associated with body size and carcass yields in Pekin ducks

(2019) Meng-Ting Deng et al.   BMC GENOMICS

Identification of suitable reference genes for normalization of RT-qPCR data in eggplant fruit and shoot borer (Leucinodes orbonalis Guenée)

(2019) Bheeranna Kariyanna et al.   BIOLOGIA

Transcriptomic Analysis of Red-Fleshed Apples Reveals the Novel Role of MdWRKY11 in Flavonoid and Anthocyanin Biosynthesis

(2018) Nan Wang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Changes in secondary metabolites, organic acids and soluble sugars during the development of plum fruit cv. ‘Furongli’ (Prunus salicina Lindl.)

(2018) Cui-Cui Jiang et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

Comparative transcriptome analysis reveals key genes potentially related to soluble sugar and organic acid accumulation in watermelon

(2018) Lei Gao et al.   PLoS One

Metagenomic and Metatranscriptomic Analyses of Diverse Watermelon Cultivars Reveal the Role of Fruit Associated Microbiome in Carbohydrate Metabolism and Ripening of Mature Fruits

(2018) Thangasamy Saminathan et al.   Frontiers in Plant Science

A Tonoplast Sugar Transporter Underlies a Sugar Accumulation QTL in Watermelon

(2017) Yi Ren et al.   PLANT PHYSIOLOGY

Differential gene expression in Varroa jacobsoni mites following a host shift to European honey bees (Apis mellifera)

(2016) Gladys K. Andino et al.   BMC GENOMICS

Spatial accumulation pattern of citrulline and other nutrients in immature and mature watermelon fruits

(2016) Kinya Akashi et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

The Citrus transcription factor, CitERF13, regulates citric acid accumulation via a protein-protein interaction with the vacuolar proton pump, CitVHA-c4

(2016) Shao-jia Li et al.   Scientific Reports

Uncovering co-expression gene network modules regulating fruit acidity in diverse apples

(2015) Yang Bai et al.   BMC GENOMICS

Genes Encoding Aluminum-Activated Malate Transporter II and their Association with Fruit Acidity in Apple

(2015) Baiquan Ma et al.   Plant Genome

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Identification of Suitable Reference Genes for Gene Expression Normalization in qRT-PCR Analysis in Watermelon

(2014) Qiusheng Kong et al.   PLoS One

Leaf Fructose Content Is Controlled by the Vacuolar Transporter SWEET17 in Arabidopsis

(2013) Fabien Chardon et al.   CURRENT BIOLOGY

What controls fleshy fruit acidity? A review of malate and citrate accumulation in fruit cells

(2013) A. Etienne et al.   JOURNAL OF EXPERIMENTAL BOTANY

Overexpression of a proton-coupled vacuolar glucose exporter impairs freezing tolerance and seed germination

(2013) Patrick A. W. Klemens et al.   NEW PHYTOLOGIST

The vacuolar channel VvALMT9 mediates malate and tartrate accumulation in berries of Vitis vinifera

(2013) Alexis De Angeli et al.   PLANTA

Role of metabolite transporters in source-sink carbon allocation

(2013) Frank Ludewig et al.   Frontiers in Plant Science

Hexose Kinases and Their Role in Sugar-Sensing and Plant Development

(2013) David Granot et al.   Frontiers in Plant Science

Proteomic analysis of apricot fruit during ripening

(2012) Chiara D'Ambrosio et al.   Journal of Proteomics

A natural mutation-led truncation in one of the two aluminum-activated malate transporter-like genes at the Ma locus is associated with low fruit acidity in apple

(2012) Yang Bai et al.   MOLECULAR GENETICS AND GENOMICS

Expression Patterns of Genes Involved in Sugar Metabolism and Accumulation during Apple Fruit Development

(2012) Mingjun Li et al.   PLoS One

A Novel Arabidopsis Vacuolar Glucose Exporter Is Involved in Cellular Sugar Homeostasis and Affects the Composition of Seed Storage Compounds

(2011) G. Poschet et al.   PLANT PHYSIOLOGY

Metabolic Profiling during Peach Fruit Development and Ripening Reveals the Metabolic Networks That Underpin Each Developmental Stage

(2011) V. A. Lombardo et al.   PLANT PHYSIOLOGY

Sucrose Efflux Mediated by SWEET Proteins as a Key Step for Phloem Transport

(2011) L.-Q. Chen et al.   SCIENCE

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Carbon metabolism of peach fruit after harvest: changes in enzymes involved in organic acid and sugar level modifications

(2009) J. Borsani et al.   JOURNAL OF EXPERIMENTAL BOTANY

Molecular cloning of three malic acid related genes MdPEPC, MdVHA-A, MdcyME and their expression analysis in apple fruits

(2009) Yu-Xin Yao et al.   SCIENTIA HORTICULTURAE

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Gene expression in developing watermelon fruit

(2008) W Patrick Wechter et al.   BMC GENOMICS

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS