Impact of kinetic isotope effects in isotopic studies of metabolic systems

Sampling of intracellular metabolites for stationary and non-stationary 13C metabolic flux analysis in Escherichia coli

(2014) Pierre Millard et al.   ANALYTICAL BIOCHEMISTRY

Isotopic Studies of Metabolic Systems by Mass Spectrometry: Using Pascal’s Triangle To Produce Biological Standards with Fully Controlled Labeling Patterns

(2014) Pierre Millard et al.   ANALYTICAL CHEMISTRY

X13CMS: Global Tracking of Isotopic Labels in Untargeted Metabolomics

(2014) Xiaojing Huang et al.   ANALYTICAL CHEMISTRY

Parallel labeling experiments validate Clostridium acetobutylicum metabolic network model for 13 C metabolic flux analysis

(2014) Jennifer Au et al.   METABOLIC ENGINEERING

A novel platform for automated high-throughput fluxome profiling of metabolic variants

(2014) Stéphanie Heux et al.   METABOLIC ENGINEERING

Kinetic models in industrial biotechnology – Improving cell factory performance

(2014) Joachim Almquist et al.   METABOLIC ENGINEERING

Quantitative flux analysis reveals folate-dependent NADPH production

(2014) Jing Fan et al.   NATURE

Stable isotope-labeling studies in metabolomics: new insights into structure and dynamics of metabolic networks

(2014) Achuthanunni Chokkathukalam et al.   Bioanalysis

Measurement uncertainty of isotopologue fractions in fluxomics determined via mass spectrometry

(2013) R. Guerrasio et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

IsoDesign: A software for optimizing the design of13C-metabolic flux analysis experiments

(2013) Pierre Millard et al.   BIOTECHNOLOGY AND BIOENGINEERING

Kinetic isotope effects significantly influence intracellular metabolite13C labeling patterns and flux determination

(2013) Thomas M. Wasylenko et al.   Biotechnology Journal

Systematic identification of allosteric protein-metabolite interactions that control enzyme activity in vivo

(2013) Hannes Link et al.   NATURE BIOTECHNOLOGY

The Carbon Storage Regulator (Csr) System Exerts a Nutrient-Specific Control over Central Metabolism in Escherichia coli Strain Nissle 1917

(2013) Olga Revelles et al.   PLoS One

Isotopic profiling of 13C-labeled biological samples by two-dimensional heteronuclear J-resolved nuclear magnetic resonance spectroscopy

(2012) Edern Cahoreau et al.   ANALYTICAL BIOCHEMISTRY

Rational design of 13C-labeling experiments for metabolic flux analysis in mammalian cells

(2012) Scott B Crown et al.   BMC Systems Biology

UFJCOSY: A Fast 3D NMR Method for Measuring Isotopic Enrichments in Complex Samples

(2012) Patrick Giraudeau et al.   CHEMPHYSCHEM

Isotope labeling experiments in metabolomics and fluxomics

(2012) Sebastian Klein et al.   Wiley Interdisciplinary Reviews-Systems Biology and Medicine

Ultrafast Quantitative 2D NMR: An Efficient Tool for the Measurement of Specific Isotopic Enrichments in Complex Biological Mixtures

(2011) Patrick Giraudeau et al.   ANALYTICAL CHEMISTRY

Collisional fragmentation of central carbon metabolites in LC-MS/MS increases precision of 13C metabolic flux analysis

(2011) Martin Rühl et al.   BIOTECHNOLOGY AND BIOENGINEERING

Fluxomers: a new approach for 13C metabolic flux analysis

(2011) Orr Srour et al.   BMC Systems Biology

Large-scale 13C-flux analysis reveals distinct transcriptional control of respiratory and fermentative metabolism in Escherichia coli

(2011) B. R. B. Haverkorn van Rijsewijk et al.   Molecular Systems Biology

13C metabolic flux analysis for larger scale cultivation using gas chromatography-combustion-isotope ratio mass spectrometry

(2010) Yongbo Yuan et al.   METABOLIC ENGINEERING

The Systems Biology Graphical Notation

(2009) Nicolas Le Novère et al.   NATURE BIOTECHNOLOGY

Demonstration of the ethylmalonyl-CoA pathway by using 13C metabolomics

(2009) R. Peyraud et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analysis of 13C labeling enrichment in microbial culture applying metabolic tracer experiments using gas chromatography–combustion–isotope ratio mass spectrometry

(2008) Elmar Heinzle et al.   ANALYTICAL BIOCHEMISTRY

Development and application of a differential method for reliable metabolome analysis in Escherichia coli

(2008) Hilal Taymaz-Nikerel et al.   ANALYTICAL BIOCHEMISTRY

13C labeling experiments at metabolic nonstationary conditions: An exploratory study

(2008) Sebastian Wahl et al.   BMC BIOINFORMATICS