Patterns of in situ Mineral Colonization by Microorganisms in a ~60°C Deep Continental Subsurface Aquifer

Widespread energy limitation to life in global subseafloor sediments

(2020) J. A. Bradley et al.   Science Advances

Genome of the candidate phylum Aminicenantes bacterium from a deep subsurface thermal aquifer revealed its fermentative saccharolytic lifestyle

(2019) Vitaly V. Kadnikov et al.   EXTREMOPHILES

How long does it take a pyrite framboid to form?

(2019) David Rickard   EARTH AND PLANETARY SCIENCE LETTERS

Novel prosthecate bacteria from the candidate phylum Acetothermia

(2018) Liping Hao et al.   ISME Journal

The biomass distribution on Earth

(2018) Yinon M. Bar-On et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The deep-subsurface sulfate reducer Desulfotomaculum kuznetsovii employs two methanol-degrading pathways

(2018) Diana Z. Sousa et al.   Nature Communications

Bioenergetic Controls on Microbial Ecophysiology in Marine Sediments

(2018) James A. Bradley et al.   Frontiers in Microbiology

The biomass and biodiversity of the continental subsurface

(2018) C. Magnabosco et al.   Nature Geoscience

Genomic Description of ‘Candidatus Abyssubacteria,’ a Novel Subsurface Lineage Within the Candidate Phylum Hydrogenedentes

(2018) Lily Momper et al.   Frontiers in Microbiology

In situ electrochemical enrichment and isolation of a magnetite-reducing bacterium from a high pH serpentinizing spring

(2017) Annette R. Rowe et al.   ENVIRONMENTAL MICROBIOLOGY

Spatially resolved capture of hydrogen sulfide from the water column and sedimentary pore waters for abundance and stable isotopic analysis

(2017) D.A. Fike et al.   MARINE CHEMISTRY

Methyl-compound use and slow growth characterize microbial life in 2-km-deep subseafloor coal and shale beds

(2017) Elizabeth Trembath-Reichert et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Major phylum-level differences between porefluid and host rock bacterial communities in the terrestrial deep subsurface

(2017) Lily Momper et al.   Environmental Microbiology Reports

Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems

(2017) Sean P. Jungbluth et al.   PeerJ

Normalization and microbial differential abundance strategies depend upon data characteristics

(2017) Sophie Weiss et al.   Microbiome

Microbial turnover times in the deep seabed studied by amino acid racemization modelling

(2017) Stefan Braun et al.   Scientific Reports

Deep microbial life in high-quality granitic groundwater from geochemically and geographically distinct underground boreholes

(2016) Kohei Ino et al.   Environmental Microbiology Reports

Phylogeography, Salinity Adaptations and Metabolic Potential of the Candidate Division KB1 Bacteria Based on a Partial Single Cell Genome

(2016) Lisa M. Nigro et al.   Frontiers in Microbiology

Marine sponge skeleton photosensitized by copper phthalocyanine: A catalyst for Rhodamine B degradation

(2016) Małgorzata Norman et al.   Open Chemistry

Deep subsurface carbon cycling in the Nankai Trough (Japan)-Evidence of tectonically induced stimulation of a deep microbial biosphere

(2015) N. Riedinger et al.   GEOCHEMISTRY GEOPHYSICS GEOSYSTEMS

Comparison of Archaeal and Bacterial Diversity in Methane Seep Carbonate Nodules and Host Sediments, Eel River Basin and Hydrate Ridge, USA

(2015) Olivia U. Mason et al.   MICROBIAL ECOLOGY

Methane Seep Carbonates Host Distinct, Diverse, and Dynamic Microbial Assemblages

(2015) David H. Case et al.   mBio

Power limits for microbial life

(2015) Douglas E. LaRowe et al.   Frontiers in Microbiology

Mineral Microniches Control the Diversity of Subsurface Microbial Populations

(2014) Aaron A. Jones et al.   GEOMICROBIOLOGY JOURNAL

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

(2014) Paul J. McMurdie et al.   PLoS Computational Biology

Chemolithotrophy in the continental deep subsurface: Sanford Underground Research Facility (SURF), USA

(2014) Magdalena R. Osburn et al.   Frontiers in Microbiology

Trends and future challenges in sampling the deep terrestrial biosphere

(2014) Michael J. Wilkins et al.   Frontiers in Microbiology

Functional microbial diversity explains groundwater chemistry in a pristine aquifer

(2013) Theodore M Flynn et al.   BMC MICROBIOLOGY

Quantifying the degradation of organic matter in marine sediments: A review and synthesis

(2013) Sandra Arndt et al.   EARTH-SCIENCE REVIEWS

Weighing the deep continental biosphere

(2013) Sean McMahon et al.   FEMS MICROBIOLOGY ECOLOGY

Does aspartic acid racemization constrain the depth limit of the subsurface biosphere?

(2013) T. C. Onstott et al.   Geobiology

Mineralogy Drives Bacterial Biogeography of Hydrothermally Inactive Seafloor Sulfide Deposits

(2013) Brandy M. Toner et al.   GEOMICROBIOLOGY JOURNAL

Methyloversatilis thermotolerans sp. nov., a novel thermotolerant facultative methylotroph isolated from a hot spring

(2013) N. V. Doronina et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Diversity of Microbial Communities in Production and Injection Waters of Algerian Oilfields Revealed by 16S rRNA Gene Amplicon 454 Pyrosequencing

(2013) Nesrine Lenchi et al.   PLoS One

Surface chemistry allows for abiotic precipitation of dolomite at low temperature

(2013) Jennifer A. Roberts et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Turnover of microbial lipids in the deep biosphere and growth of benthic archaeal populations

(2013) S. Xie et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacteria–surface interactions

(2013) Hannah H. Tuson et al.   Soft Matter

Low Temperature Geomicrobiology Follows Host Rock Composition Along a Geochemical Gradient in Lau Basin

(2013) Jason B. Sylvan et al.   Frontiers in Microbiology

Desulfotomaculum spp. and related gram-positive sulfate-reducing bacteria in deep subsurface environments

(2013) Thomas Aüllo et al.   Frontiers in Microbiology

Facile synthesis of ultrathin magnetic iron oxide nanoplates by Schikorr reaction

(2013) Ming Ma et al.   Nanoscale Research Letters

Microbial and functional diversity of a subterrestrial high pH groundwater associated to serpentinization

(2012) Igor Tiago et al.   ENVIRONMENTAL MICROBIOLOGY

Comparative proteomic analysis reveals insights into anoxic growth ofMethyloversatilis universalis FAM5 on methanol and ethanol

(2012) Huijie Lu et al.   ENVIRONMENTAL MICROBIOLOGY

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

A Deeply Branching Thermophilic Bacterium with an Ancient Acetyl-CoA Pathway Dominates a Subsurface Ecosystem

(2012) Hideto Takami et al.   PLoS One

Prospects for the study of evolution in the deep biosphere

(2012) Jennifer F. Biddle   Frontiers in Microbiology

Capture of Planktonic Microbial Diversity in Fractures by Long-Term Monitoring of Flowing Boreholes, Evander Basin, South Africa

(2011) Mark M. Davidson et al.   GEOMICROBIOLOGY JOURNAL

Cultivation of methanogenic community from subseafloor sediments using a continuous-flow bioreactor

(2011) Hiroyuki Imachi et al.   ISME Journal

Carbon and nitrogen assimilation in deep subseafloor microbial cells

(2011) Y. Morono et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Deep Biosphere in Terrestrial Sediments in the Chesapeake Bay Area, Virginia, USA

(2011) Anja Breuker et al.   Frontiers in Microbiology

Subseafloor Ocean Crust Microbial Observatories: Development of FLOCS (FLow-through Osmo Colonization System) and Evaluation of Borehole Construction Materials

(2010) Beth Orcutt et al.   GEOMICROBIOLOGY JOURNAL

Colonization of subsurface microbial observatories deployed in young ocean crust

(2010) Beth N Orcutt et al.   ISME Journal

Mineralization of the metre-long biosilica structures of glass sponges is templated on hydroxylated collagen

(2010) Hermann Ehrlich et al.   Nature Chemistry

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Potential contaminant transport in the regional Carbonate Aquifer beneath Yucca Mountain, Nevada, USA

(2009) John Bredehoeft et al.   HYDROGEOLOGY JOURNAL

Interbasin flow in the Great Basin with special reference to the southern Funeral Mountains and the source of Furnace Creek springs, Death Valley, California, U.S.

(2009) Wayne R. Belcher et al.   JOURNAL OF HYDROLOGY

A high-resolution chemical and structural study of framboidal pyrite formed within a low-temperature bacterial biofilm

(2008) L. C. W. MACLEAN et al.   Geobiology

Environmental Genomics Reveals a Single-Species Ecosystem Deep Within Earth

(2008) D. Chivian et al.   SCIENCE