Longitudinal dynamics of gut bacteriome, mycobiome and virome after fecal microbiota transplantation in graft-versus-host disease
出版年份 2021 全文链接
标题
Longitudinal dynamics of gut bacteriome, mycobiome and virome after fecal microbiota transplantation in graft-versus-host disease
作者
关键词
-
出版物
Nature Communications
Volume 12, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2021-01-04
DOI
10.1038/s41467-020-20240-x
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- FEAST: fast expectation-maximization for microbial source tracking
- (2019) Liat Shenhav et al. NATURE METHODS
- HumanMycobiomeScan: a new bioinformatics tool for the characterization of the fungal fraction in metagenomic samples
- (2019) Matteo Soverini et al. BMC GENOMICS
- Scaling read aligners to hundreds of threads on general-purpose processors
- (2018) Ben Langmead et al. BIOINFORMATICS
- Torquetenovirus Dynamics and Immune Marker Properties in Patients Following Allogeneic Hematopoietic Stem Cell Transplantation: A Prospective Longitudinal Study
- (2018) Philipp Wohlfarth et al. BIOLOGY OF BLOOD AND MARROW TRANSPLANTATION
- High gastrointestinal microbial diversity and clinical outcome in graft-versus-host disease patients
- (2018) Florent Malard et al. BONE MARROW TRANSPLANTATION
- Tu1882 - Fecal Microbiota Transplantation Improves Gastrointestinal Graft-Versus-Host Disease and Restores the Microbiome: A Pediatric Experience
- (2018) Wing Fei Wong et al. GASTROENTEROLOGY
- Quantification of Torque Teno Virus Viremia as a Prospective Biomarker for Infectious Disease in Kidney Allograft Recipients
- (2018) Robert Strassl et al. JOURNAL OF INFECTIOUS DISEASES
- Gut fungal dysbiosis correlates with reduced efficacy of fecal microbiota transplantation in Clostridium difficile infection
- (2018) Tao Zuo et al. Nature Communications
- Species-level functional profiling of metagenomes and metatranscriptomes
- (2018) Eric A. Franzosa et al. NATURE METHODS
- Roles for Intestinal Bacteria, Viruses, and Fungi in Pathogenesis of Inflammatory Bowel Diseases and Therapeutic Approaches
- (2017) R. Balfour Sartor et al. GASTROENTEROLOGY
- Repeated fecal microbiota transplantations attenuate diarrhea and lead to sustained changes in the fecal microbiota in acute, refractory gastrointestinal graft- versus -host-disease
- (2017) Walter Spindelboeck et al. HAEMATOLOGICA
- The Fungal Mycobiome and Its Interaction with Gut Bacteria in the Host
- (2017) Qi Sam et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Exact sequence variants should replace operational taxonomic units in marker-gene data analysis
- (2017) Benjamin J Callahan et al. ISME Journal
- Dynamics of Torque Teno virus plasma DNAemia in allogeneic stem cell transplant recipients
- (2017) Eliseo Albert et al. JOURNAL OF CLINICAL VIROLOGY
- The eukaryotic gut virome in hematopoietic stem cell transplantation: new clues in enteric graft-versus-host disease
- (2017) Jérôme Legoff et al. NATURE MEDICINE
- Repeated fecal microbiota transplantations attenuate diarrhea and lead to sustained changes in the fecal microbiota in acute, refractory gastrointestinal graft- versus -host-disease
- (2017) Walter Spindelboeck et al. HAEMATOLOGICA
- Fecal microbiota transplantation for patients with steroid-resistant acute graft-versus-host disease of the gut
- (2016) K. Kakihana et al. BLOOD
- ViromeScan: a new tool for metagenomic viral community profiling
- (2016) Simone Rampelli et al. BMC GENOMICS
- DADA2: High-resolution sample inference from Illumina amplicon data
- (2016) Benjamin J Callahan et al. NATURE METHODS
- Adenovirus infection and disease in paediatric haematopoietic stem cell transplant patients: clues for antiviral pre-emptive treatment
- (2015) L. Feghoul et al. CLINICAL MICROBIOLOGY AND INFECTION
- UniRef clusters: a comprehensive and scalable alternative for improving sequence similarity searches
- (2014) B. E. Suzek et al. BIOINFORMATICS
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Metagenomic Analysis of the Stool Microbiome in Patients Receiving Allogeneic Stem Cell Transplantation: Loss of Diversity Is Associated with Use of Systemic Antibiotics and More Pronounced in Gastrointestinal Graft-versus-Host Disease
- (2014) Ernst Holler et al. BIOLOGY OF BLOOD AND MARROW TRANSPLANTATION
- Fast and sensitive protein alignment using DIAMOND
- (2014) Benjamin Buchfink et al. NATURE METHODS
- Kraken: ultrafast metagenomic sequence classification using exact alignments
- (2014) Derrick E Wood et al. GENOME BIOLOGY
- Duodenal Infusion of Donor Feces for Recurrent Clostridium difficile
- (2013) Els van Nood et al. NEW ENGLAND JOURNAL OF MEDICINE
- The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases
- (2013) Ron Caspi et al. NUCLEIC ACIDS RESEARCH
- Regulation of intestinal inflammation by microbiota following allogeneic bone marrow transplantation
- (2012) Robert R. Jenq et al. JOURNAL OF EXPERIMENTAL MEDICINE
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Concise Review: Acute Graft-Versus-Host Disease: Immunobiology, Prevention, and Treatment
- (2012) Anthony D. Sung et al. Stem Cells Translational Medicine
- The Complex Relationship between Human Herpesvirus 6 and Acute Graft-versus-Host Disease
- (2011) Claire Pichereau et al. BIOLOGY OF BLOOD AND MARROW TRANSPLANTATION
- The human gut virome: Inter-individual variation and dynamic response to diet
- (2011) S. Minot et al. GENOME RESEARCH
- Metagenomic biomarker discovery and explanation
- (2011) Nicola Segata et al. GENOME BIOLOGY
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